##gff-version 3
HG01358_chrY	CAT	gene	103994	105770	.	-	.	source_gene_common_name=LOC124905300;source_gene=hg002_chrY_paternal_1;gene_id=HG01358_ch_G0000001;gene_biotype=protein_coding;gene_name=LOC124905300;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG01358_ch_G0000001;Name=LOC124905300
HG01358_chrY	CAT	transcript	103994	105770	9900	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_G0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=HG01358_ch_T0000001;Name=LOC124905300
HG01358_chrY	CAT	exon	103994	104023	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01358_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	103994	104023	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01358_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	103994	103996	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=stop_codon:HG01358_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	104024	104098	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG01358_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	104099	104596	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01358_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	104099	104596	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01358_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	104597	104836	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG01358_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	104837	105073	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01358_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	104837	105073	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01358_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	105074	105205	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01358_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	105074	105205	.	-	2	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01358_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	105206	105512	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG01358_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	105513	105550	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01358_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	105513	105550	.	-	1	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01358_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	105551	105729	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG01358_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	105730	105770	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01358_ch_T0000001:5;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	105730	105770	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01358_ch_T0000001:5;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	105768	105770	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000001;gene_id=HG01358_ch_G0000001;Parent=HG01358_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=start_codon:HG01358_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	110706	132117	.	+	.	source_gene_common_name=PLCXD1;source_gene=hg002_chrY_paternal_2;gene_id=HG01358_ch_G0000002;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,augTM,transMap;ID=HG01358_ch_G0000002;Name=PLCXD1
HG01358_chrY	CAT	transcript	110706	132117	9990	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG01358_ch_T0000002;Name=PLCXD1
HG01358_chrY	CAT	exon	110706	111008	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	111009	113481	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	113482	113629	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	113503	113629	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	113503	113505	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG01358_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	113630	117989	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	117990	118126	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	117990	118126	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	118127	119904	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	119905	120033	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	119905	120033	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	120034	120755	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	120756	120911	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	120756	120911	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	120912	122291	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	122292	122475	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	122292	122475	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	122476	127855	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	127856	132117	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	127856	128094	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	128092	128094	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000002;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG01358_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	110706	132117	1000	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=HG01358_ch_T0000003;Name=PLCXD1
HG01358_chrY	CAT	exon	110706	111008	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	111009	113481	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	113482	113629	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	113630	117989	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	117990	118126	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	118127	119904	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	119905	120033	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	120034	120755	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	120756	120911	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	120912	122291	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	122292	122475	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	122476	127855	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	127856	128538	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	128539	130649	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	130650	132117	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000003;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000003:7;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	112834	132117	9950	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG01358_ch_T0000004;Name=PLCXD1
HG01358_chrY	CAT	exon	112834	112948	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	112949	113481	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	113482	113629	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	113503	113629	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	113503	113505	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG01358_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	113630	117989	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	117990	118126	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	117990	118126	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	118127	119904	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	119905	120033	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	119905	120033	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	120034	120755	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	120756	120911	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	120756	120911	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	120912	122291	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	122292	122475	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	122292	122475	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	122476	127855	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01358_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	127856	132117	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01358_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	127856	128094	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01358_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	128092	128094	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000004;gene_id=HG01358_ch_G0000002;Parent=HG01358_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG01358_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	133520	151715	.	-	.	source_gene_common_name=GTPBP6;source_gene=hg002_chrY_paternal_3;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;gene_id=HG01358_ch_G0000003;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000003;Name=GTPBP6
HG01358_chrY	CAT	transcript	133520	149774	100	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01358_ch_T0000005;Name=GTPBP6
HG01358_chrY	CAT	exon	133520	133958	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	133835	133958	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	133835	133837	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01358_ch_T0000005;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	133959	136068	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136069	136221	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136069	136221	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136222	136440	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136441	136589	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136441	136589	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136590	141590	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	141591	141799	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	141591	141799	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	141800	142797	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	142798	143196	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	142798	143196	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	143197	144421	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	144422	144489	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	144422	144489	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	144490	145161	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145162	145292	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145162	145292	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145293	145497	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145498	145568	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145498	145515	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	145513	145515	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01358_ch_T0000005;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145569	149708	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	149709	149774	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000005;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000005:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	133520	151715	100	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01358_ch_T0000006;Name=GTPBP6
HG01358_chrY	CAT	exon	133520	133958	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	133835	133958	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	133835	133837	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01358_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	133959	136068	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136069	136221	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136069	136221	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136222	136440	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136441	136589	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136441	136589	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136590	141590	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	141591	141799	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	141591	141799	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	141800	143037	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	143038	143196	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	143038	143196	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	143197	144421	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	144422	144489	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	144422	144489	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	144490	145161	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145162	145292	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145162	145292	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145293	145497	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145498	145568	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145498	145568	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145569	149842	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	149843	149980	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	149843	149980	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	149981	151357	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	151358	151715	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000006:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	151358	151706	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000006:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	151704	151706	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000006;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01358_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	133520	151715	100	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01358_ch_T0000007;Name=GTPBP6
HG01358_chrY	CAT	exon	133520	133958	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	133835	133958	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	133835	133837	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01358_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	133959	136068	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136069	136221	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136069	136221	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136222	136440	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136441	136589	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136441	136589	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136590	141590	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	141591	141799	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	141591	141799	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	141800	142797	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	142798	143196	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	142798	143196	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	143197	144421	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	144422	144489	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	144422	144489	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	144490	145161	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145162	145292	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145162	145292	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145293	145497	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145498	145568	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145498	145568	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145569	149842	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	149843	149980	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	149843	149980	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	149981	151357	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	151358	151715	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	151358	151706	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	151704	151706	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000007;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01358_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	133520	151715	100	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01358_ch_T0000008;Name=GTPBP6
HG01358_chrY	CAT	exon	133520	133958	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	133835	133958	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	133835	133837	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01358_ch_T0000008;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	133959	136068	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136069	136221	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136069	136221	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136222	136440	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136441	136589	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136441	136589	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136590	141590	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	141591	141799	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	141591	141799	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	141800	142797	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	142798	143196	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	142798	143196	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	143197	144421	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	144422	144489	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	144422	144489	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	144490	145161	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145162	145292	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145162	145292	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145293	145497	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145498	145568	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145498	145568	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145569	149842	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	149843	149980	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	149843	149912	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	149910	149912	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01358_ch_T0000008;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	149981	150207	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	150208	150413	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	150414	151357	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000008:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	151358	151715	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000008;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000008:10;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	133520	151715	100	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01358_ch_T0000009;Name=GTPBP6
HG01358_chrY	CAT	exon	133520	133958	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	133835	133958	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	133835	133837	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01358_ch_T0000009;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	133959	136068	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136069	136221	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136069	136221	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136222	136440	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	136441	136589	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	136441	136589	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	136590	141590	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	141591	141799	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	141591	141799	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	141800	142797	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	142798	143196	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	142798	143196	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	143197	144421	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	144422	144489	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	144422	144489	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	144490	145161	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145162	145292	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145162	145292	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145293	145497	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	145498	145568	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	145498	145568	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	145569	149842	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	149843	149980	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	149843	149912	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01358_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	149910	149912	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01358_ch_T0000009;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	149981	150207	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	150208	150348	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	150349	151357	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01358_ch_T0000009:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	151358	151715	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000009;gene_id=HG01358_ch_G0000003;Parent=HG01358_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01358_ch_T0000009:10;Name=GTPBP6;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	152064	154251	.	+	.	source_gene_common_name=LINC00685;source_gene=hg002_chrY_paternal_4;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;gene_id=HG01358_ch_G0000004;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff;ID=HG01358_ch_G0000004;Name=LINC00685
HG01358_chrY	CAT	transcript	152064	154251	1000	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=HG01358_ch_T0000010;gene_id=HG01358_ch_G0000004;Parent=HG01358_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG01358_ch_T0000010;Name=LINC00685
HG01358_chrY	CAT	exon	152064	152470	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=HG01358_ch_T0000010;gene_id=HG01358_ch_G0000004;Parent=HG01358_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG01358_ch_T0000010:0;Name=LINC00685;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	152471	153126	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=HG01358_ch_T0000010;gene_id=HG01358_ch_G0000004;Parent=HG01358_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=intron:HG01358_ch_T0000010:0;Name=LINC00685;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	153127	154251	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=HG01358_ch_T0000010;gene_id=HG01358_ch_G0000004;Parent=HG01358_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG01358_ch_T0000010:1;Name=LINC00685;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	152064	154251	1000	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.2,hg002_chrY_paternal_4.2;transcript_id=HG01358_ch_T0000011;gene_id=HG01358_ch_G0000004;Parent=HG01358_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG01358_ch_T0000011;Name=LINC00685
HG01358_chrY	CAT	exon	152064	154251	.	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.2,hg002_chrY_paternal_4.2;transcript_id=HG01358_ch_T0000011;gene_id=HG01358_ch_G0000004;Parent=HG01358_ch_T0000011;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG01358_ch_T0000011:0;Name=LINC00685;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	167178	221651	.	-	.	source_gene_common_name=PPP2R3B;source_gene=hg002_chrY_paternal_5;gene_id=HG01358_ch_G0000005;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG01358_ch_G0000005;Name=PPP2R3B
HG01358_chrY	CAT	transcript	167178	194850	9960	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG01358_ch_T0000012;Name=PPP2R3B
HG01358_chrY	CAT	exon	167178	168003	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	167307	168003	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	167307	167309	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG01358_ch_T0000012;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	168004	171542	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	171543	171649	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	171543	171649	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	171650	171716	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	171717	171835	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	171717	171835	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	171836	173813	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	173814	173989	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	173814	173989	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	173990	174316	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	174317	174406	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	174317	174406	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	174407	174891	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	174892	174940	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	174892	174940	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	174941	178091	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	178092	178248	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	178092	178248	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	178249	178756	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	178757	178843	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	178757	178843	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	178844	179283	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	179284	179358	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	179284	179358	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	179359	179784	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	179785	179887	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	179785	179887	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	179888	180140	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	180141	180244	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	180141	180244	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	180245	193922	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	193923	194108	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	193923	193949	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	193947	193949	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG01358_ch_T0000012;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	194109	194772	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	194773	194850	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=299.609;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000012;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000012:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	167898	221651	9960	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG01358_ch_T0000013;Name=PPP2R3B
HG01358_chrY	CAT	exon	167898	168875	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	168817	168875	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	168817	168819	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG01358_ch_T0000013;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	168876	168936	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	168876	168936	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	168937	171542	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	171543	171649	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	171543	171649	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	171650	171716	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	171717	171835	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	171717	171835	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	171836	173813	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	173814	173989	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	173814	173989	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	173990	174316	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	174317	174406	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	174317	174406	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	174407	174891	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	174892	174940	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	174892	174940	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	174941	178091	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	178092	178248	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	178092	178248	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	178249	178756	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	178757	178843	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	178757	178843	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	178844	179283	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	179284	179358	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	179284	179358	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	179359	179784	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	179785	179887	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	179785	179887	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	179888	180140	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	180141	180244	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	180141	180244	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	180245	193922	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	193923	194108	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	193923	194108	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	194109	221111	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01358_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	221112	221651	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01358_ch_T0000013:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	221112	221435	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01358_ch_T0000013:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	221433	221435	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.587;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG01358_ch_T0000013;gene_id=HG01358_ch_G0000005;Parent=HG01358_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG01358_ch_T0000013;Name=PPP2R3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	263852	306587	.	+	.	source_gene_common_name=LOC102724521;source_gene=hg002_chrY_paternal_6;gene_id=HG01358_ch_G0000006;gene_biotype=lncRNA;gene_name=LOC102724521;gene_sources=liftoff,transMap_pairwise;ID=HG01358_ch_G0000006;Name=LOC102724521
HG01358_chrY	CAT	transcript	263852	306587	1000	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG01358_ch_T0000014;Name=LOC102724521
HG01358_chrY	CAT	exon	263852	264320	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:0;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	264321	267667	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:0;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	267668	267925	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:1;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	267926	269413	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:1;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	269414	269528	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:2;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	269529	271063	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:2;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	271064	271230	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:3;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	271231	274775	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:3;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	274776	274848	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:4;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	274849	275081	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:4;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	275082	275386	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:5;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	275387	293276	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:5;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	293277	293889	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:6;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	293890	303348	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:6;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	303349	303469	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:7;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	303470	304545	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:7;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	304546	304744	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:8;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	304745	305351	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01358_ch_T0000014:8;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	305352	306587	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000014;gene_id=HG01358_ch_G0000006;Parent=HG01358_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01358_ch_T0000014:9;Name=LOC102724521;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	468150	502612	.	+	.	source_gene_common_name=SHOX;source_gene=hg002_chrY_paternal_9;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;gene_id=HG01358_ch_G0000007;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000007;Name=SHOX
HG01358_chrY	CAT	transcript	468150	502612	100	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG01358_ch_T0000015;Name=SHOX
HG01358_chrY	CAT	exon	468150	468410	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000015:0;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	468411	473937	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000015:0;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	473938	474646	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000015:1;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	474370	474646	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000015:0;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	474370	474372	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG01358_ch_T0000015;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	474647	478090	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000015:1;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	478091	478299	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000015:2;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	478091	478299	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000015:1;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	478300	484122	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000015:2;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	484123	484180	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000015:3;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	484123	484180	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000015:2;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	484181	484300	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000015:3;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	484301	484389	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000015:4;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	484301	484389	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000015:3;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	484390	501986	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000015:4;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	501987	502612	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000015:5;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	501987	502031	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000015:4;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	502029	502031	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000015;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG01358_ch_T0000015;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	474263	494731	100	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG01358_ch_T0000016;Name=SHOX
HG01358_chrY	CAT	exon	474263	474646	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000016:0;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	474370	474646	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000016:0;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	474370	474372	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG01358_ch_T0000016;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	474647	478090	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000016:0;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	478091	478299	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000016:1;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	478091	478299	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000016:1;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	478300	484122	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000016:1;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	484123	484180	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000016:2;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	484123	484180	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000016:2;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	484181	484300	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000016:2;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	484301	484389	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000016:3;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	484301	484389	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000016:3;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	484390	487607	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01358_ch_T0000016:3;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	487608	494731	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01358_ch_T0000016:4;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	487608	487853	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01358_ch_T0000016:4;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	487851	487853	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000016;gene_id=HG01358_ch_G0000007;Parent=HG01358_ch_T0000016;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG01358_ch_T0000016;Name=SHOX;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1039916	1062193	.	-	.	source_gene_common_name=CRLF2;source_gene=hg002_chrY_paternal_13;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;gene_id=HG01358_ch_G0000008;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000008;Name=CRLF2
HG01358_chrY	CAT	transcript	1039916	1062193	100	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG01358_ch_T0000017;Name=CRLF2
HG01358_chrY	CAT	exon	1039916	1040586	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000017:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1040323	1040586	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000017:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1040323	1040325	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG01358_ch_T0000017;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1040587	1042677	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000017:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1042678	1042762	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000017:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1042678	1042762	.	-	1	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000017:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1042763	1046245	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000017:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1046246	1046366	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000017:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1046246	1046366	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000017:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1046367	1048360	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000017:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1048361	1048523	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000017:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1048361	1048523	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000017:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1048524	1052200	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000017:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1052201	1052334	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000017:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1052201	1052334	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000017:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1052335	1056264	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000017:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1056265	1056431	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000017:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1056265	1056277	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000017:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1056275	1056277	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG01358_ch_T0000017;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1056432	1062099	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000017:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1062100	1062193	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000017;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000017:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1039916	1062193	100	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG01358_ch_T0000018;Name=CRLF2
HG01358_chrY	CAT	exon	1039916	1040586	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1040323	1040586	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1040323	1040325	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG01358_ch_T0000018;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1040587	1042677	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1042678	1042762	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1042678	1042762	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1042763	1046245	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1046246	1046366	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1046246	1046366	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1046367	1048360	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1048361	1048523	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1048361	1048523	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1048524	1052200	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1052201	1052334	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1052201	1052334	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1052335	1056264	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1056265	1056431	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1056265	1056431	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1056432	1058636	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1058637	1058739	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000018:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1058637	1058739	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000018:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1058740	1062099	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000018:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1062100	1062193	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000018:7;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1062100	1062178	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000018:7;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1062176	1062178	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000018;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG01358_ch_T0000018;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1039916	1062193	100	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG01358_ch_T0000019;Name=CRLF2
HG01358_chrY	CAT	exon	1039916	1040586	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000019:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1040323	1040586	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000019:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1040323	1040325	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG01358_ch_T0000019;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1040587	1042677	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000019:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1042678	1042762	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000019:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1042678	1042762	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000019:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1042763	1046245	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000019:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1046246	1046366	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000019:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1046246	1046366	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000019:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1046367	1048360	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000019:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1048361	1048523	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000019:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1048361	1048523	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000019:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1048524	1052200	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000019:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1052201	1052334	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000019:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1052201	1052334	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000019:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1052335	1056264	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000019:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1056265	1056431	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000019:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1056265	1056431	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000019:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1056432	1058636	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000019:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1058637	1058736	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000019:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1058637	1058736	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000019:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1058737	1062099	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01358_ch_T0000019:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1062100	1062193	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01358_ch_T0000019:7;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1062100	1062178	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01358_ch_T0000019:7;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1062176	1062178	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000019;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000019;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG01358_ch_T0000019;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1039916	1062193	1000	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_G0000008;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=HG01358_ch_T0000020;Name=CRLF2
HG01358_chrY	CAT	exon	1039916	1040586	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01358_ch_T0000020:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1040587	1042677	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01358_ch_T0000020:0;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1042678	1042762	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01358_ch_T0000020:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1042763	1046245	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01358_ch_T0000020:1;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1046246	1046366	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01358_ch_T0000020:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1046367	1048599	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01358_ch_T0000020:2;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1048600	1048944	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01358_ch_T0000020:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1048945	1052200	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01358_ch_T0000020:3;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1052201	1052334	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01358_ch_T0000020:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1052335	1056264	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01358_ch_T0000020:4;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1056265	1056431	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01358_ch_T0000020:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1056432	1058636	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01358_ch_T0000020:5;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1058637	1058736	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01358_ch_T0000020:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1058737	1062099	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01358_ch_T0000020:6;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1062100	1062193	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000020;gene_id=HG01358_ch_G0000008;Parent=HG01358_ch_T0000020;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01358_ch_T0000020:7;Name=CRLF2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1118056	1177127	.	+	.	source_gene_common_name=CSF2RA;source_gene=hg002_chrY_paternal_14;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;gene_id=HG01358_ch_G0000009;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000009;Name=CSF2RA
HG01358_chrY	CAT	transcript	1118056	1157533	100	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000021;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000021;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1157219	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000021:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157220	1157533	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000021:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157220	1157327	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000021:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157325	1157327	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000021;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000021;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000022;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000022;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1154510	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1154511	1154612	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1154511	1154612	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1154613	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000022:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000022:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000022:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000022;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000022;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000023;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000023;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1154510	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1154511	1154612	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1154511	1154612	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1154613	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000023:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000023:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000023:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000023;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000023;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000024;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000024;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000024:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000024;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000024;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000025;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125990	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125991	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000025;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000025:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000025:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000025:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000025;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000025;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000026;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000026;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000026:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000026;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000026;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000027;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000027;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145602	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145603	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145603	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1150258	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1150259	1150321	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1150259	1150321	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1150322	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000027:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000027;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000027;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000028;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1122066	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1122067	1122188	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1122189	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157093	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157091	1157093	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000028:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000028;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000028:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000029;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157093	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157091	1157093	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000029;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000030;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157093	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157091	1157093	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000030;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000030:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000031;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000031:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000031:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000031;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1157533	100	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000032;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1157219	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157220	1157533	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000032:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157220	1157327	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157325	1157327	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000032;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000033;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000033:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000033;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1174564	100	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000034;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174363	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174364	1174382	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174364	1174382	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1174383	1174470	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174471	1174564	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000034:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174471	1174487	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174485	1174487	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000034;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1174741	100	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000035;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174359	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174360	1174382	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174360	1174382	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1174383	1174470	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174471	1174741	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000035:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174471	1174609	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174607	1174609	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000035;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1174741	100	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000036;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174359	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174360	1174382	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174360	1174382	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1174383	1174470	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174471	1174741	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000036:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174471	1174609	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174607	1174609	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000036;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1174741	100	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000037;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174359	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174360	1174382	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174360	1174382	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1174383	1174470	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174471	1174741	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000037:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174471	1174609	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174607	1174609	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000037;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1175023	100	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000038;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174363	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174364	1175023	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174364	1174408	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174406	1174408	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000038;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1175023	100	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000039;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174359	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174360	1175023	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000039:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174360	1174386	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174384	1174386	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000039;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1175023	100	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000040;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174359	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174360	1175023	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000040:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174360	1174386	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174384	1174386	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000040;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1175023	100	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000041;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174363	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174364	1175023	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174364	1174408	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174406	1174408	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000041;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1175023	100	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000042;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157093	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157091	1157093	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174359	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174360	1175023	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000042;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000043;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161497	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161495	1161497	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000043;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1175023	100	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000044;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174363	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000044:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174364	1175023	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000044:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174364	1174408	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174406	1174408	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000044;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1175023	100	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000045;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157093	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157091	1157093	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174363	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174364	1175023	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000045;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1177127	100	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000046;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1164176	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1164177	1164283	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1164177	1164245	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1164243	1164245	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1164284	1176936	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000046:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1176937	1177127	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000046;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000046:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1177127	100	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000047;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1176936	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1176937	1177127	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1176937	1176972	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1176970	1176972	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000047;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1177127	100	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000048;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1176936	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1176937	1177127	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000048:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1176937	1176972	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1176970	1176972	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000048;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1177127	100	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000049;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157093	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157091	1157093	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1176936	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1176937	1177127	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000049;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1177127	100	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000050;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1176936	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1176937	1177127	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000050:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1176937	1176972	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1176970	1176972	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000050;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000051;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157093	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157091	1157093	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000051;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000052;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157093	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1157091	1157093	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000052;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000053;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133683	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133684	1133835	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1133836	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000053:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000053;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000054;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126044	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126045	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1154510	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1154511	1154612	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1154511	1154612	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1154613	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000054:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000054:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000054;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	100	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000055;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140070	1140143	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1140070	1140072	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1161310	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1161385	1161387	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000055;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1118056	1161843	1000	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=HG01358_ch_T0000056;Name=CSF2RA
HG01358_chrY	CAT	exon	1118056	1118121	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1118122	1125980	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1125981	1126068	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1126069	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1161309	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1161310	1161843	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000056;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000056;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000056:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1133511	1174741	100	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000057;Name=CSF2RA
HG01358_chrY	CAT	exon	1133511	1133835	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1133836	1133952	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1133953	1134054	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1133979	1134054	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1133979	1133981	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134055	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137041	1137183	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174359	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174360	1174382	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174360	1174382	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1174383	1174470	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000057:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174471	1174741	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000057:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174471	1174609	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000057:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174607	1174609	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000057;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1134078	1174745	100	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01358_ch_T0000058;Name=CSF2RA
HG01358_chrY	CAT	exon	1134078	1134317	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1134318	1137040	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1137041	1137183	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1137097	1137183	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1137097	1137099	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01358_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1137184	1139773	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1139774	1139897	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1139774	1139897	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1139898	1140013	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1140014	1140143	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1140014	1140143	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1140144	1141592	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1141593	1141765	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1141593	1141765	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1141766	1145583	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145584	1145717	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1145584	1145717	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1145718	1146682	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1146683	1146712	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1146683	1146712	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1146713	1151741	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1151742	1151877	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1151742	1151877	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1151878	1155172	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1155173	1155269	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1155173	1155269	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1155270	1157037	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1157038	1157119	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1157038	1157119	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1157120	1174359	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174360	1174382	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174360	1174382	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1174383	1174470	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01358_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1174471	1174745	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01358_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1174471	1174609	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01358_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1174607	1174609	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000058;gene_id=HG01358_ch_G0000009;Parent=HG01358_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01358_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1144802	1145101	.	-	.	source_gene_common_name=LOC124905238;source_gene=hg002_chrY_paternal_15;gene_id=HG01358_ch_G0000010;gene_biotype=lncRNA;gene_name=LOC124905238;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG01358_ch_G0000010;Name=LOC124905238
HG01358_chrY	CAT	transcript	1144802	1145101	1000	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;AdditionalSources=liftoff,transMap;transcript_id=HG01358_ch_T0000059;gene_id=HG01358_ch_G0000010;Parent=HG01358_ch_G0000010;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=HG01358_ch_T0000059;Name=LOC124905238
HG01358_chrY	CAT	exon	1144802	1144838	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;AdditionalSources=liftoff,transMap;transcript_id=HG01358_ch_T0000059;gene_id=HG01358_ch_G0000010;Parent=HG01358_ch_T0000059;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG01358_ch_T0000059:0;Name=LOC124905238;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1144839	1145098	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;AdditionalSources=liftoff,transMap;transcript_id=HG01358_ch_T0000059;gene_id=HG01358_ch_G0000010;Parent=HG01358_ch_T0000059;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=intron:HG01358_ch_T0000059:0;Name=LOC124905238;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1145099	1145101	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;AdditionalSources=liftoff,transMap;transcript_id=HG01358_ch_T0000059;gene_id=HG01358_ch_G0000010;Parent=HG01358_ch_T0000059;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG01358_ch_T0000059:1;Name=LOC124905238;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1144871	1144902	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_16;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;gene_id=HG01358_ch_G0000011;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG01358_ch_G0000011;Name=MIR3690
HG01358_chrY	CAT	transcript	1144871	1144945	1000	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG01358_ch_T0000060;gene_id=HG01358_ch_G0000011;Parent=HG01358_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG01358_ch_T0000060;Name=MIR3690
HG01358_chrY	CAT	exon	1144871	1144945	.	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG01358_ch_T0000060;gene_id=HG01358_ch_G0000011;Parent=HG01358_ch_T0000060;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG01358_ch_T0000060:0;Name=MIR3690;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1144880	1144902	1000	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG01358_ch_T0000061;gene_id=HG01358_ch_G0000011;Parent=HG01358_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG01358_ch_T0000061;Name=MIR3690
HG01358_chrY	CAT	exon	1144880	1144902	.	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG01358_ch_T0000061;gene_id=HG01358_ch_G0000011;Parent=HG01358_ch_T0000061;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG01358_ch_T0000061:0;Name=MIR3690;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1145174	1145205	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_18;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_18.1;gene_id=HG01358_ch_G0000012;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG01358_ch_G0000012;Name=MIR3690
HG01358_chrY	CAT	transcript	1145174	1145248	1000	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_18.1;transcript_id=HG01358_ch_T0000062;gene_id=HG01358_ch_G0000012;Parent=HG01358_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG01358_ch_T0000062;Name=MIR3690
HG01358_chrY	CAT	exon	1145174	1145248	.	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_18.1;transcript_id=HG01358_ch_T0000062;gene_id=HG01358_ch_G0000012;Parent=HG01358_ch_T0000062;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG01358_ch_T0000062:0;Name=MIR3690;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1145183	1145205	1000	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_18.2;transcript_id=HG01358_ch_T0000063;gene_id=HG01358_ch_G0000012;Parent=HG01358_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG01358_ch_T0000063;Name=MIR3690
HG01358_chrY	CAT	exon	1145183	1145205	.	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_18.2;transcript_id=HG01358_ch_T0000063;gene_id=HG01358_ch_G0000012;Parent=HG01358_ch_T0000063;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG01358_ch_T0000063:0;Name=MIR3690;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1189444	1233940	.	+	.	source_gene_common_name=IL3RA;source_gene=hg002_chrY_paternal_20;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;gene_id=HG01358_ch_G0000013;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000013;Name=IL3RA
HG01358_chrY	CAT	transcript	1189444	1233940	100	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01358_ch_T0000064;Name=IL3RA
HG01358_chrY	CAT	exon	1189444	1189585	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1189586	1194505	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194506	1194607	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1194544	1194607	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1194544	1194546	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01358_ch_T0000064;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194608	1204904	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1204905	1205037	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1204905	1205037	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205038	1205126	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205127	1205311	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1205127	1205311	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205312	1208968	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208969	1209084	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1208969	1209084	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1209085	1211608	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211609	1211635	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1211609	1211635	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1211636	1217977	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217978	1218092	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1217978	1218092	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218093	1229811	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229812	1229917	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1229812	1229917	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1229918	1232194	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1232195	1232276	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1232195	1232276	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1232277	1233640	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000064:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1233641	1233940	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000064:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1233641	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000064:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1233713	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000064;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01358_ch_T0000064;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1189444	1233940	100	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01358_ch_T0000065;Name=IL3RA
HG01358_chrY	CAT	exon	1189444	1189585	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1189586	1194505	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194506	1194607	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1194544	1194607	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1194544	1194546	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01358_ch_T0000065;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194608	1198094	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1198095	1198213	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1198095	1198213	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1198214	1201211	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1201212	1201326	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1201212	1201326	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1201327	1204904	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1204905	1205037	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1204905	1205037	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205038	1205126	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205127	1205311	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1205127	1205311	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205312	1208968	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208969	1209084	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1208969	1209084	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1209085	1211608	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211609	1211635	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1211609	1211635	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1211636	1217977	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217978	1218092	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1217978	1218092	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218093	1229811	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229812	1229917	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1229812	1229917	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1229918	1232194	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1232195	1232276	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1232195	1232276	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1232277	1233640	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000065:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1233641	1233940	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000065:11;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1233641	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000065:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1233713	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000065;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01358_ch_T0000065;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1189444	1233940	100	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01358_ch_T0000066;Name=IL3RA
HG01358_chrY	CAT	exon	1189444	1189585	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1189586	1194508	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194509	1194607	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1194544	1194607	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1194544	1194546	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01358_ch_T0000066;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194608	1198094	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1198095	1198213	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1198095	1198213	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1198214	1201211	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1201212	1201326	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1201212	1201326	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1201327	1204904	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1204905	1205037	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1204905	1205037	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205038	1205126	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205127	1205311	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1205127	1205311	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205312	1208968	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208969	1209084	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1208969	1209084	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1209085	1211608	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211609	1211635	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1211609	1211635	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1211636	1217977	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217978	1218092	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1217978	1218092	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218093	1229811	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229812	1229917	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1229812	1229917	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1229918	1232194	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1232195	1232276	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1232195	1232276	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1232277	1233640	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000066:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1233641	1233940	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000066:11;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1233641	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000066:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1233713	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000066;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01358_ch_T0000066;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1189444	1233940	100	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01358_ch_T0000067;Name=IL3RA
HG01358_chrY	CAT	exon	1189444	1189585	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1189586	1194505	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194506	1194607	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1194544	1194607	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1194544	1194546	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01358_ch_T0000067;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194608	1198094	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1198095	1198213	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1198095	1198213	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1198214	1201211	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1201212	1201326	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1201212	1201326	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1201327	1204904	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1204905	1205037	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1204905	1205037	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205038	1205129	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205130	1205311	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1205130	1205311	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205312	1208968	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208969	1209084	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1208969	1209084	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1209085	1211608	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211609	1211635	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1211609	1211635	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1211636	1217977	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217978	1218092	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1217978	1218092	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218093	1229811	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229812	1229917	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1229812	1229917	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1229918	1232194	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1232195	1232276	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1232195	1232276	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1232277	1233640	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000067:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1233641	1233940	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000067:11;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1233641	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000067:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1233713	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000067;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01358_ch_T0000067;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1189444	1233940	100	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01358_ch_T0000068;Name=IL3RA
HG01358_chrY	CAT	exon	1189444	1189585	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1189586	1194508	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194509	1194607	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1194544	1194607	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1194544	1194546	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01358_ch_T0000068;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194608	1198094	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1198095	1198213	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1198095	1198213	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1198214	1201211	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1201212	1201326	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1201212	1201326	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1201327	1204904	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1204905	1205037	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1204905	1205037	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205038	1205129	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205130	1205311	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1205130	1205311	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205312	1208968	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208969	1209084	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1208969	1209084	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1209085	1211608	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211609	1211635	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1211609	1211635	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1211636	1217977	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217978	1218092	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1217978	1218092	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218093	1229811	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229812	1229917	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1229812	1229917	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1229918	1232194	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1232195	1232276	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1232195	1232276	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1232277	1233640	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000068:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1233641	1233940	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000068:11;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1233641	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000068:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1233713	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000068;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000068;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01358_ch_T0000068;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1194360	1233940	100	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01358_ch_T0000082;Name=IL3RA
HG01358_chrY	CAT	exon	1194360	1194607	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1194364	1194607	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1194364	1194366	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01358_ch_T0000082;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194608	1198094	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1198095	1198213	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1198095	1198213	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1198214	1201211	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1201212	1201326	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1201212	1201326	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1201327	1204904	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1204905	1205037	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1204905	1205037	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205038	1205126	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205127	1205311	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1205127	1205311	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205312	1208968	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208969	1209084	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1208969	1209084	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1209085	1211608	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211609	1211635	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1211609	1211635	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1211636	1217977	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217978	1218092	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1217978	1218092	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218093	1229811	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229812	1229917	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1229812	1229917	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1229918	1232194	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1232195	1232276	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1232195	1232276	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1232277	1233640	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1233641	1233940	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1233641	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1233713	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000082;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01358_ch_T0000082;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1194360	1233940	100	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01358_ch_T0000083;Name=IL3RA
HG01358_chrY	CAT	exon	1194360	1194607	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1194364	1194607	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1194364	1194366	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01358_ch_T0000083;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194608	1198094	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1198095	1198213	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1198095	1198213	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1198214	1201211	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1201212	1201326	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1201212	1201326	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1201327	1204904	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1204905	1205037	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1204905	1205037	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205038	1205129	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205130	1205311	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1205130	1205311	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205312	1208968	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208969	1209084	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1208969	1209084	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1209085	1211608	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211609	1211635	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1211609	1211635	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1211636	1217977	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217978	1218092	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1217978	1218092	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218093	1229811	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229812	1229917	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1229812	1229917	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1229918	1232194	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1232195	1232276	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1232195	1232276	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1232277	1233640	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01358_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1233641	1233940	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01358_ch_T0000083:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1233641	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01358_ch_T0000083:10;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1233713	1233715	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000083;gene_id=HG01358_ch_G0000013;Parent=HG01358_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01358_ch_T0000083;Name=IL3RA;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1190233	1229629	.	-	.	source_gene_common_name=LOC101928032;source_gene=hg002_chrY_paternal_21;gene_id=HG01358_ch_G0000014;gene_biotype=lncRNA;gene_name=LOC101928032;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG01358_ch_G0000014;Name=LOC101928032
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000069;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1214198	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1214199	1214577	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1214578	1217942	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217943	1218011	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218012	1220743	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220744	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000069:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=288.7218888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000069;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000069;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000069:9;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000070;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000070:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000070:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000070:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000070:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1214198	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000070:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1214199	1214577	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1214578	1217942	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000070:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217943	1218011	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218012	1220743	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000070:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220744	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000070:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=287.337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000070;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000070;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000070:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000071;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1214198	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1214199	1214577	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1214578	1217942	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217943	1218011	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218012	1220726	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220727	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000071:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=288.72288888888886;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000071;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000071:9;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000072;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000072:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000072:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000072:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000072:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000072:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000072:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000072:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000072:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000072:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000072:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000072:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1220743	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000072:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220744	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000072:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000072:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=285.55728571428574;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000072;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000072;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000072:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000073;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000073:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000073:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000073:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000073:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000073:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1217942	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000073:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217943	1218011	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218012	1220743	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000073:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220744	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000073:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=287.347;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000073;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000073;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000073:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1212223	1000	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000074;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000074:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000074:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000074:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000074:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000074:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000074:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000074:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000074:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000074:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000074:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000074:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1211507	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000074:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211508	1212223	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=283.19933333333336;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000074;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000074:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1212223	1000	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000075;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000075:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000075:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000075:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000075:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000075:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000075:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000075:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000075:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000075:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000075:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000075:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1211281	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000075:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1211282	1212223	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=283.20833333333337;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000075;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000075;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000075:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000076;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000076:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000076:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000076:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000076:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000076:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1217942	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000076:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217943	1218011	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218012	1220726	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000076:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220727	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000076:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000076;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000076:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000077;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000077:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000077:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000077:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000077:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000077:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1217942	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000077:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217943	1218011	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218012	1220739	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000077:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220740	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000077:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=287.348;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000077;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000077:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000078;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000078:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000078:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000078:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000078:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000078:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000078:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000078:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000078:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000078:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000078:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000078:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1220739	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000078:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220740	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000078:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000078:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000078;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000078:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000079;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000079:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000079:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000079:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000079:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000079:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000079:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000079:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000079:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000079:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000079:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000079:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1220726	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000079:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220727	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000079:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000079:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=285.5582857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000079;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000079:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000080;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000080:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000080:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000080:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000080:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000080:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000080:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000080:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000080:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000080:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000080:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000080:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000080:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=283.1683333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000080;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000080:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1190233	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000081;Name=LOC101928032
HG01358_chrY	CAT	exon	1190233	1190335	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1190336	1190457	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1190458	1191570	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1191571	1194375	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1194376	1194591	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1194592	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205276	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205277	1205424	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205425	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1214432	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1214433	1214577	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1214578	1217942	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217943	1218011	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218012	1220743	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220744	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000081:8;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=288.74388888888893;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000081;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000081:9;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1203571	1229629	1000	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01358_ch_T0000084;Name=LOC101928032
HG01358_chrY	CAT	exon	1203571	1203657	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1203658	1205114	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1205115	1205523	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1205524	1208319	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1208320	1208888	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1208889	1217942	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1217943	1218011	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1218012	1220743	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1220744	1220878	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1220879	1229474	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01358_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1229475	1229629	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG01358_ch_T0000084;gene_id=HG01358_ch_G0000014;Parent=HG01358_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01358_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1237397	1243477	.	-	.	source_gene_common_name=SLC25A6;source_gene=hg002_chrY_paternal_22;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;gene_id=HG01358_ch_G0000015;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000015;Name=SLC25A6
HG01358_chrY	CAT	transcript	1237397	1243477	100	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_G0000015;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=HG01358_ch_T0000085;Name=SLC25A6
HG01358_chrY	CAT	exon	1237397	1238004	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG01358_ch_T0000085:0;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1237847	1238004	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG01358_ch_T0000085:0;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1237847	1237849	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=stop_codon:HG01358_ch_T0000085;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1238005	1238523	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG01358_ch_T0000085:0;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1238524	1238664	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG01358_ch_T0000085:1;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1238524	1238664	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG01358_ch_T0000085:1;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1238665	1240485	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG01358_ch_T0000085:1;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1240486	1240972	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG01358_ch_T0000085:2;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1240486	1240972	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG01358_ch_T0000085:2;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1240973	1243262	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG01358_ch_T0000085:2;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1243263	1243477	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG01358_ch_T0000085:3;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1243263	1243373	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG01358_ch_T0000085:3;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1243371	1243373	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000085;gene_id=HG01358_ch_G0000015;Parent=HG01358_ch_T0000085;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=start_codon:HG01358_ch_T0000085;Name=SLC25A6;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1243357	1248257	.	+	.	source_gene_common_name=LOC105373102;source_gene=hg002_chrY_paternal_23;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;gene_id=HG01358_ch_G0000016;gene_biotype=protein_coding;gene_name=LOC105373102;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000016;Name=LOC105373102
HG01358_chrY	CAT	transcript	1243357	1248257	100	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_G0000016;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=HG01358_ch_T0000086;Name=LOC105373102
HG01358_chrY	CAT	exon	1243357	1243705	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG01358_ch_T0000086:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1243357	1243705	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG01358_ch_T0000086:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1243357	1243359	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=start_codon:HG01358_ch_T0000086;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1243706	1246505	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG01358_ch_T0000086:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1246506	1246924	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG01358_ch_T0000086:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1246506	1246924	.	+	2	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG01358_ch_T0000086:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1246925	1247747	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG01358_ch_T0000086:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1247748	1248257	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG01358_ch_T0000086:2;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1247748	1247768	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG01358_ch_T0000086:2;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1247766	1247768	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000086;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000086;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=stop_codon:HG01358_ch_T0000086;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1243357	1248257	1000	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000087;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_G0000016;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=HG01358_ch_T0000087;Name=LOC105373102
HG01358_chrY	CAT	exon	1243357	1243705	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000087;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000087;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG01358_ch_T0000087:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1243706	1246505	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000087;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000087;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG01358_ch_T0000087:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1246506	1246924	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000087;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000087;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG01358_ch_T0000087:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1246925	1247747	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000087;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000087;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG01358_ch_T0000087:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1247748	1247891	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000087;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000087;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG01358_ch_T0000087:2;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1247892	1247985	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000087;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000087;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG01358_ch_T0000087:2;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1247986	1248257	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000087;gene_id=HG01358_ch_G0000016;Parent=HG01358_ch_T0000087;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG01358_ch_T0000087:3;Name=LOC105373102;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1248401	1250789	.	+	.	source_gene_common_name=LINC00106;source_gene=hg002_chrY_paternal_24;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;gene_id=HG01358_ch_G0000017;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG01358_ch_G0000017;Name=LINC00106
HG01358_chrY	CAT	transcript	1248401	1250789	1000	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01358_ch_T0000088;gene_id=HG01358_ch_G0000017;Parent=HG01358_ch_G0000017;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=HG01358_ch_T0000088;Name=LINC00106
HG01358_chrY	CAT	exon	1248401	1248600	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01358_ch_T0000088;gene_id=HG01358_ch_G0000017;Parent=HG01358_ch_T0000088;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG01358_ch_T0000088:0;Name=LINC00106;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1248601	1250201	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01358_ch_T0000088;gene_id=HG01358_ch_G0000017;Parent=HG01358_ch_T0000088;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG01358_ch_T0000088:0;Name=LINC00106;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1250202	1250335	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01358_ch_T0000088;gene_id=HG01358_ch_G0000017;Parent=HG01358_ch_T0000088;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG01358_ch_T0000088:1;Name=LINC00106;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1250336	1250743	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01358_ch_T0000088;gene_id=HG01358_ch_G0000017;Parent=HG01358_ch_T0000088;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG01358_ch_T0000088:1;Name=LINC00106;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1250744	1250789	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01358_ch_T0000088;gene_id=HG01358_ch_G0000017;Parent=HG01358_ch_T0000088;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG01358_ch_T0000088:2;Name=LINC00106;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1251908	1265291	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=hg002_chrY_paternal_25;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;gene_id=HG01358_ch_G0000018;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG01358_ch_G0000018;Name=ASMTL-AS1
HG01358_chrY	CAT	transcript	1251908	1263434	1000	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01358_ch_T0000089;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG01358_ch_T0000089;Name=ASMTL-AS1
HG01358_chrY	CAT	exon	1251908	1251963	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01358_ch_T0000089;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000089;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000089:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1251964	1252838	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01358_ch_T0000089;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000089;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01358_ch_T0000089:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1252839	1253602	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01358_ch_T0000089;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000089;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000089:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1253603	1254754	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01358_ch_T0000089;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000089;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01358_ch_T0000089:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1254755	1254879	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01358_ch_T0000089;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000089;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000089:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1254880	1262590	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01358_ch_T0000089;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000089;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01358_ch_T0000089:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1262591	1263434	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01358_ch_T0000089;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000089;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000089:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1251908	1265291	1000	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG01358_ch_T0000090;Name=ASMTL-AS1
HG01358_chrY	CAT	exon	1251908	1251963	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000090:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1251964	1252838	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01358_ch_T0000090:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1252839	1253602	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000090:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1253603	1254754	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01358_ch_T0000090:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1254755	1254879	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000090:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1254880	1262590	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01358_ch_T0000090:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1262591	1262736	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000090:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1262737	1263609	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01358_ch_T0000090:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1263610	1264158	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000090:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1264159	1264590	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01358_ch_T0000090:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1264591	1265291	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01358_ch_T0000090;gene_id=HG01358_ch_G0000018;Parent=HG01358_ch_T0000090;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01358_ch_T0000090:5;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1254433	1304188	.	-	.	source_gene_common_name=ASMTL;source_gene=hg002_chrY_paternal_26;gene_id=HG01358_ch_G0000019;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,augTM,transMap;ID=HG01358_ch_G0000019;Name=ASMTL
HG01358_chrY	CAT	transcript	1254433	1304188	9950	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01358_ch_T0000091;Name=ASMTL
HG01358_chrY	CAT	exon	1254433	1254783	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1254563	1254783	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1254563	1254565	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01358_ch_T0000091;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1254784	1262579	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1262580	1262702	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1262580	1262702	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1262703	1267833	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1267834	1267977	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1267834	1267977	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1267978	1268842	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1268843	1268975	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1268843	1268975	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1268976	1271531	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1271532	1271716	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1271532	1271716	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1271717	1275398	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1275399	1275561	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1275399	1275561	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1275562	1277607	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1277608	1277995	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1277608	1277995	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1277996	1282141	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1282142	1282250	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1282142	1282250	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1282251	1285703	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1285704	1285765	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1285704	1285765	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1285766	1286375	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1286376	1286440	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1286376	1286440	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1286441	1289776	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1289777	1289824	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1289777	1289824	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1289825	1292860	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1292861	1292992	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:11;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1292861	1292911	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000091:11;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1292909	1292911	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01358_ch_T0000091;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1292993	1304059	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000091:11;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1304060	1304188	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000091;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000091;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000091:12;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1254433	1304188	9960	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01358_ch_T0000092;Name=ASMTL
HG01358_chrY	CAT	exon	1254433	1254783	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1254563	1254783	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1254563	1254565	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01358_ch_T0000092;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1254784	1262579	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1262580	1262702	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1262580	1262702	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1262703	1267833	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1267834	1267977	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1267834	1267977	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1267978	1268842	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1268843	1268975	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1268843	1268975	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1268976	1271531	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1271532	1271716	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1271532	1271716	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1271717	1275398	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1275399	1275561	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1275399	1275561	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1275562	1277607	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1277608	1277995	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1277608	1277995	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1277996	1282141	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1282142	1282250	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1282142	1282250	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1282251	1285703	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1285704	1285765	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1285704	1285765	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1285766	1286375	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1286376	1286440	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1286376	1286440	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1286441	1289776	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1289777	1289824	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1289777	1289824	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1289825	1292860	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1292861	1292992	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:11;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1292861	1292992	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:11;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1292993	1303189	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:11;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1303190	1303348	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:12;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1303190	1303282	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000092:12;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1303280	1303282	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01358_ch_T0000092;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1303349	1304059	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000092:12;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1304060	1304188	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000092;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000092;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000092:13;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1254433	1304188	9950	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01358_ch_T0000093;Name=ASMTL
HG01358_chrY	CAT	exon	1254433	1254783	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1254563	1254783	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1254563	1254565	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01358_ch_T0000093;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1254784	1262579	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:0;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1262580	1262702	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1262580	1262702	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1262703	1267833	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:1;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1267834	1267977	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1267834	1267977	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1267978	1268842	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:2;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1268843	1268975	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1268843	1268975	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1268976	1271531	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:3;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1271532	1271716	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1271532	1271716	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1271717	1275398	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:4;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1275399	1275561	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1275399	1275561	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1275562	1277607	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:5;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1277608	1277995	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1277608	1277995	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1277996	1282141	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:6;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1282142	1282250	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1282142	1282250	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1282251	1285703	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:7;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1285704	1285765	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1285704	1285765	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1285766	1289776	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:8;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1289777	1289824	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1289777	1289824	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1289825	1292860	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:9;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1292861	1292992	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1292861	1292922	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01358_ch_T0000093:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1292920	1292922	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01358_ch_T0000093;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1292993	1304059	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01358_ch_T0000093:10;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1304060	1304188	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000093;gene_id=HG01358_ch_G0000019;Parent=HG01358_ch_T0000093;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01358_ch_T0000093:11;Name=ASMTL;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1313128	1387796	.	-	.	source_gene_common_name=P2RY8;source_gene=hg002_chrY_paternal_27;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;gene_id=HG01358_ch_G0000020;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000020;Name=P2RY8
HG01358_chrY	CAT	transcript	1313128	1318272	100	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000094;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01358_ch_T0000094;Name=P2RY8
HG01358_chrY	CAT	exon	1313128	1317127	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000094;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000094;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000094:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1316024	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000094;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000094;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01358_ch_T0000094:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1316024	1316026	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000094;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000094;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01358_ch_T0000094;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1317101	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000094;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000094;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01358_ch_T0000094;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1317128	1317576	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000094;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000094;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01358_ch_T0000094:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1317577	1318272	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000094;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000094;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000094:1;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1313128	1343841	100	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000095;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01358_ch_T0000095;Name=P2RY8
HG01358_chrY	CAT	exon	1313128	1317127	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000095;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000095;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000095:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1316024	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000095;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000095;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01358_ch_T0000095:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1316024	1316026	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000095;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000095;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01358_ch_T0000095;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1317101	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000095;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000095;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01358_ch_T0000095;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1317128	1343786	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000095;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000095;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01358_ch_T0000095:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1343787	1343841	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000095;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000095;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000095:1;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1313128	1345501	100	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000096;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01358_ch_T0000096;Name=P2RY8
HG01358_chrY	CAT	exon	1313128	1317127	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000096;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000096;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000096:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1316024	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000096;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000096;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01358_ch_T0000096:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1316024	1316026	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000096;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000096;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01358_ch_T0000096;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1317101	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000096;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000096;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01358_ch_T0000096;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1317128	1344884	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000096;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000096;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01358_ch_T0000096:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1344885	1345501	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000096;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000096;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000096:1;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1313128	1387796	100	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000097;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01358_ch_T0000097;Name=P2RY8
HG01358_chrY	CAT	exon	1313128	1317127	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000097;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000097:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1316024	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000097;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01358_ch_T0000097:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1316024	1316026	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000097;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01358_ch_T0000097;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1317101	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000097;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01358_ch_T0000097;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1317128	1387531	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000097;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01358_ch_T0000097:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1387532	1387796	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000097;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000097:1;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1313128	1387796	100	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01358_ch_T0000098;Name=P2RY8
HG01358_chrY	CAT	exon	1313128	1317127	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000098:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1316024	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01358_ch_T0000098:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1316024	1316026	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01358_ch_T0000098;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1317101	1317103	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01358_ch_T0000098;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1317128	1319051	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01358_ch_T0000098:0;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1319052	1319220	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000098:1;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1319221	1387531	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01358_ch_T0000098:1;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1387532	1387796	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000098;gene_id=HG01358_ch_G0000020;Parent=HG01358_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01358_ch_T0000098:2;Name=P2RY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1442247	1453023	.	+	.	source_gene_common_name=AKAP17A;source_gene=hg002_chrY_paternal_28;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;gene_id=HG01358_ch_G0000021;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000021;Name=AKAP17A
HG01358_chrY	CAT	transcript	1442247	1453023	100	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_G0000021;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=HG01358_ch_T0000099;Name=AKAP17A
HG01358_chrY	CAT	exon	1442247	1442412	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000099:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1442413	1444086	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000099:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1444087	1444867	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000099:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1444106	1444867	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG01358_ch_T0000099:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1444106	1444108	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=start_codon:HG01358_ch_T0000099;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1444868	1445998	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000099:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1445999	1446147	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000099:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1445999	1446147	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG01358_ch_T0000099:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1446148	1449694	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000099:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1449695	1449935	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000099:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1449695	1449935	.	+	1	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG01358_ch_T0000099:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1449936	1451161	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000099:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1451162	1453023	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000099:4;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1451162	1452097	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG01358_ch_T0000099:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1452095	1452097	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000099;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000099;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=stop_codon:HG01358_ch_T0000099;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1442247	1453023	1000	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_G0000021;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=HG01358_ch_T0000100;Name=AKAP17A
HG01358_chrY	CAT	exon	1442247	1442412	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000100:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1442413	1444086	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000100:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1444087	1444867	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000100:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1444868	1445998	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000100:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1445999	1446147	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000100:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1446148	1449694	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000100:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1449695	1449935	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000100:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1449936	1450640	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000100:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1450641	1450710	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000100:4;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1450711	1451161	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01358_ch_T0000100:4;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1451162	1453023	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000100;gene_id=HG01358_ch_G0000021;Parent=HG01358_ch_T0000100;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01358_ch_T0000100:5;Name=AKAP17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1446070	1489336	.	+	.	source_gene_common_name=ASMT;source_gene=hg002_chrY_paternal_29;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;gene_id=HG01358_ch_G0000022;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000022;Name=ASMT
HG01358_chrY	CAT	transcript	1446070	1489336	100	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG01358_ch_T0000101;Name=ASMT
HG01358_chrY	CAT	exon	1446070	1446147	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1446148	1464956	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1464957	1465092	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1465024	1465092	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1465024	1465026	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG01358_ch_T0000101;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1465093	1472957	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1472958	1473132	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1472958	1473132	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1473133	1474087	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1474088	1474217	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1474088	1474217	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1474218	1477251	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1477252	1477320	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1477252	1477320	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1477321	1479360	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1479361	1479479	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1479361	1479479	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1479480	1482249	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1482250	1482333	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:6;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1482250	1482333	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1482334	1482694	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:6;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1482695	1482835	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:7;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1482695	1482835	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:6;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1482836	1485988	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:7;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1485989	1486111	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:8;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1485989	1486111	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:7;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1486112	1489057	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000101:8;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1489058	1489336	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000101:9;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1489058	1489269	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000101:8;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1489267	1489269	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000101;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000101;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG01358_ch_T0000101;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1464883	1489336	100	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG01358_ch_T0000102;Name=ASMT
HG01358_chrY	CAT	exon	1464883	1465092	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1465024	1465092	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1465024	1465026	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG01358_ch_T0000102;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1465093	1472957	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000102:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1472958	1473132	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1472958	1473132	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1473133	1474087	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000102:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1474088	1474217	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1474088	1474217	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1474218	1477251	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000102:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1477252	1477320	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1477252	1477320	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1477321	1479360	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000102:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1479361	1479479	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1479361	1479479	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1479480	1482249	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000102:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1482250	1482333	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1482250	1482333	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1482334	1482694	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000102:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1482695	1482835	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:6;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1482695	1482835	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:6;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1482836	1485988	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000102:6;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1485989	1486111	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:7;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1485989	1486111	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:7;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1486112	1489057	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000102:7;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1489058	1489336	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000102:8;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1489058	1489269	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000102:8;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1489267	1489269	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000102;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000102;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG01358_ch_T0000102;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1464957	1489336	100	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG01358_ch_T0000103;Name=ASMT
HG01358_chrY	CAT	exon	1464957	1465092	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000103:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1465024	1465092	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000103:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	1465024	1465026	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG01358_ch_T0000103;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1465093	1472957	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000103:0;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1472958	1473132	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000103:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1472958	1473132	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000103:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1473133	1474087	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000103:1;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1474088	1474217	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000103:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1474088	1474217	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000103:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1474218	1477251	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000103:2;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1477252	1477320	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000103:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1477252	1477320	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000103:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1477321	1479360	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000103:3;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1479361	1479479	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000103:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1479361	1479479	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000103:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1479480	1485988	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000103:4;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1485989	1486111	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000103:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1485989	1486111	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000103:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1486112	1489057	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01358_ch_T0000103:5;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1489058	1489336	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01358_ch_T0000103:6;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1489058	1489269	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01358_ch_T0000103:6;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1489267	1489269	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000103;gene_id=HG01358_ch_G0000022;Parent=HG01358_ch_T0000103;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG01358_ch_T0000103;Name=ASMT;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1578110	1602049	.	+	.	source_gene_common_name=LINC02968;source_gene=hg002_chrY_paternal_30;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;gene_id=HG01358_ch_G0000023;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=HG01358_ch_G0000023;Name=LINC02968
HG01358_chrY	CAT	transcript	1578110	1602049	1000	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01358_ch_T0000104;Name=LINC02968
HG01358_chrY	CAT	exon	1578110	1578414	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000104:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1578415	1579644	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000104:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1579645	1579888	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000104:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1579889	1589547	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000104:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589548	1589761	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000104:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1589762	1589854	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000104:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589855	1590639	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000104:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1590640	1593356	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000104:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1593357	1593608	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000104:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1593609	1597351	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000104:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1597352	1597411	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000104:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1597412	1601748	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000104:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1601749	1602049	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01358_ch_T0000104;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000104;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000104:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1578164	1602049	1000	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01358_ch_T0000105;Name=LINC02968
HG01358_chrY	CAT	exon	1578164	1578414	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000105:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1578415	1579641	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000105:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1579642	1579903	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000105:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1579904	1587997	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000105:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1587998	1588093	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000105:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1588094	1589350	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000105:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589351	1589761	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000105:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1589762	1589854	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000105:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589855	1590639	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000105:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1590640	1593356	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000105:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1593357	1593608	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000105:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1593609	1597351	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000105:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1597352	1597411	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000105:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1597412	1601748	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000105:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1601749	1602049	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01358_ch_T0000105;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000105;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000105:7;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1578247	1602049	1000	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01358_ch_T0000106;Name=LINC02968
HG01358_chrY	CAT	exon	1578247	1578414	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000106:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1578415	1579641	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000106:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1579642	1579888	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000106:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1579889	1587997	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000106:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1587998	1588093	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000106:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1588094	1589547	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000106:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589548	1589761	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000106:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1589762	1589854	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000106:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589855	1590639	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000106:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1590640	1593356	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000106:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1593357	1593608	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000106:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1593609	1597351	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000106:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1597352	1597411	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000106:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1597412	1601748	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000106:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1601749	1602049	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01358_ch_T0000106;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000106;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000106:7;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1578247	1602049	1000	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01358_ch_T0000107;Name=LINC02968
HG01358_chrY	CAT	exon	1578247	1578414	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000107:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1578415	1579641	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000107:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1579642	1579888	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000107:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1579889	1587997	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000107:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1587998	1588093	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000107:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1588094	1589544	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000107:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589545	1589761	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000107:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1589762	1589854	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000107:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589855	1590639	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000107:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1590640	1593356	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000107:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1593357	1593608	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000107:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1593609	1597351	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000107:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1597352	1597411	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000107:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1597412	1601748	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000107:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1601749	1602049	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01358_ch_T0000107;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000107:7;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1578247	1602049	1000	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01358_ch_T0000108;Name=LINC02968
HG01358_chrY	CAT	exon	1578247	1578414	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000108:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1578415	1579644	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000108:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1579645	1579888	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000108:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1579889	1587997	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000108:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1587998	1588093	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000108:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1588094	1589547	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000108:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589548	1589761	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000108:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1589762	1589854	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000108:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589855	1590639	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000108:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1590640	1593356	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000108:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1593357	1593608	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000108:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1593609	1597351	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000108:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1597352	1597411	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000108:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1597412	1601748	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000108:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1601749	1602049	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01358_ch_T0000108;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000108:7;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1578247	1602049	1000	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01358_ch_T0000109;Name=LINC02968
HG01358_chrY	CAT	exon	1578247	1578414	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000109:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1578415	1579641	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000109:0;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1579642	1579888	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000109:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1579889	1587997	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000109:1;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1587998	1588093	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000109:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1588094	1589655	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000109:2;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589656	1589761	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000109:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1589762	1589854	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000109:3;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1589855	1590639	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000109:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1590640	1593356	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000109:4;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1593357	1593608	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000109:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1593609	1597351	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000109:5;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1597352	1597411	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000109:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1597412	1601748	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01358_ch_T0000109:6;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1601749	1602049	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01358_ch_T0000109;gene_id=HG01358_ch_G0000023;Parent=HG01358_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01358_ch_T0000109:7;Name=LINC02968;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1616211	1629712	.	+	.	source_gene_common_name=LOC105379413;source_gene=hg002_chrY_paternal_31;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;gene_id=HG01358_ch_G0000024;gene_biotype=lncRNA;gene_name=LOC105379413;gene_sources=liftoff;ID=HG01358_ch_G0000024;Name=LOC105379413
HG01358_chrY	CAT	transcript	1616211	1629712	1000	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01358_ch_T0000110;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG01358_ch_T0000110;Name=LOC105379413
HG01358_chrY	CAT	exon	1616211	1616787	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01358_ch_T0000110;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000110;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01358_ch_T0000110:0;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1616788	1621439	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01358_ch_T0000110;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000110;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG01358_ch_T0000110:0;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1621440	1621653	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01358_ch_T0000110;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000110;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01358_ch_T0000110:1;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1621654	1626583	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01358_ch_T0000110;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000110;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG01358_ch_T0000110:1;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1626584	1629712	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01358_ch_T0000110;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000110;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01358_ch_T0000110:2;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	1616211	1629712	1000	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01358_ch_T0000111;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG01358_ch_T0000111;Name=LOC105379413
HG01358_chrY	CAT	exon	1616211	1616787	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01358_ch_T0000111;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000111;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01358_ch_T0000111:0;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1616788	1621439	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01358_ch_T0000111;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000111;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG01358_ch_T0000111:0;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1621440	1621602	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01358_ch_T0000111;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000111;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01358_ch_T0000111:1;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1621603	1626583	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01358_ch_T0000111;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000111;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG01358_ch_T0000111:1;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1626584	1629712	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01358_ch_T0000111;gene_id=HG01358_ch_G0000024;Parent=HG01358_ch_T0000111;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01358_ch_T0000111:2;Name=LOC105379413;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1724627	1730935	.	-	.	source_gene_common_name=LOC107985677;source_gene=hg002_chrY_paternal_32;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;gene_id=HG01358_ch_G0000025;gene_biotype=lncRNA;gene_name=LOC107985677;gene_sources=liftoff;ID=HG01358_ch_G0000025;Name=LOC107985677
HG01358_chrY	CAT	transcript	1724627	1730935	1000	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_G0000025;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=HG01358_ch_T0000112;Name=LOC107985677
HG01358_chrY	CAT	exon	1724627	1725685	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01358_ch_T0000112:0;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1725686	1726843	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01358_ch_T0000112:0;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1726844	1726957	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01358_ch_T0000112:1;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1726958	1727446	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01358_ch_T0000112:1;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1727447	1727573	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01358_ch_T0000112:2;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1727574	1728904	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01358_ch_T0000112:2;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1728905	1729220	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01358_ch_T0000112:3;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1729221	1729620	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01358_ch_T0000112:3;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1729621	1730220	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01358_ch_T0000112:4;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1730221	1730596	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01358_ch_T0000112:4;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1730597	1730935	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01358_ch_T0000112;gene_id=HG01358_ch_G0000025;Parent=HG01358_ch_T0000112;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01358_ch_T0000112:5;Name=LOC107985677;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1879682	2167375	.	-	.	source_gene_common_name=DHRSX;source_gene=hg002_chrY_paternal_33;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;gene_id=HG01358_ch_G0000026;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000026;Name=DHRSX
HG01358_chrY	CAT	transcript	1879682	2167375	100	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_G0000026;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=HG01358_ch_T0000113;Name=DHRSX
HG01358_chrY	CAT	exon	1879682	1881405	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01358_ch_T0000113:0;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1881217	1881405	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01358_ch_T0000113:0;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	1881217	1881219	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=stop_codon:HG01358_ch_T0000113;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1881406	1903893	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01358_ch_T0000113:0;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1903894	1904101	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01358_ch_T0000113:1;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1903894	1904101	.	-	1	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01358_ch_T0000113:1;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1904102	1927616	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01358_ch_T0000113:1;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1927617	1927824	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01358_ch_T0000113:2;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1927617	1927824	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01358_ch_T0000113:2;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1927825	1947599	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01358_ch_T0000113:2;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1947600	1947701	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01358_ch_T0000113:3;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	1947600	1947701	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01358_ch_T0000113:3;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1947702	2074914	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01358_ch_T0000113:3;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2074915	2074983	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01358_ch_T0000113:4;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2074915	2074983	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01358_ch_T0000113:4;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2074984	2091369	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01358_ch_T0000113:4;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2091370	2091477	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01358_ch_T0000113:5;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2091370	2091477	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01358_ch_T0000113:5;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2091478	2167215	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01358_ch_T0000113:5;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2167216	2167375	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01358_ch_T0000113:6;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2167216	2167324	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01358_ch_T0000113:6;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2167322	2167324	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000113;gene_id=HG01358_ch_G0000026;Parent=HG01358_ch_T0000113;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=start_codon:HG01358_ch_T0000113;Name=DHRSX;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	1986685	2003733	.	+	.	source_gene_common_name=LOC124905239;source_gene=hg002_chrY_paternal_34;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;gene_id=HG01358_ch_G0000027;gene_biotype=lncRNA;gene_name=LOC124905239;gene_sources=liftoff;ID=HG01358_ch_G0000027;Name=LOC124905239
HG01358_chrY	CAT	transcript	1986685	2003733	1000	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01358_ch_T0000114;gene_id=HG01358_ch_G0000027;Parent=HG01358_ch_G0000027;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=HG01358_ch_T0000114;Name=LOC124905239
HG01358_chrY	CAT	exon	1986685	1987963	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01358_ch_T0000114;gene_id=HG01358_ch_G0000027;Parent=HG01358_ch_T0000114;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG01358_ch_T0000114:0;Name=LOC124905239;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1987964	1995462	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01358_ch_T0000114;gene_id=HG01358_ch_G0000027;Parent=HG01358_ch_T0000114;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG01358_ch_T0000114:0;Name=LOC124905239;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	1995463	1995589	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01358_ch_T0000114;gene_id=HG01358_ch_G0000027;Parent=HG01358_ch_T0000114;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG01358_ch_T0000114:1;Name=LOC124905239;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	1995590	2003566	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01358_ch_T0000114;gene_id=HG01358_ch_G0000027;Parent=HG01358_ch_T0000114;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG01358_ch_T0000114:1;Name=LOC124905239;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2003567	2003733	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01358_ch_T0000114;gene_id=HG01358_ch_G0000027;Parent=HG01358_ch_T0000114;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG01358_ch_T0000114:2;Name=LOC124905239;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2152833	2167375	.	-	.	source_gene_common_name=ZBED1;source_gene=hg002_chrY_paternal_35;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;gene_id=HG01358_ch_G0000028;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000028;Name=ZBED1
HG01358_chrY	CAT	transcript	2152833	2167024	100	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000115;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG01358_ch_T0000115;Name=ZBED1
HG01358_chrY	CAT	exon	2152833	2157170	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000115;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000115;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01358_ch_T0000115:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2155033	2157117	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000115;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000115;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG01358_ch_T0000115:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2155033	2155035	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000115;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000115;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG01358_ch_T0000115;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2157115	2157117	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000115;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000115;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG01358_ch_T0000115;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2157171	2166709	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000115;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000115;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG01358_ch_T0000115:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2166710	2167024	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000115;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000115;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01358_ch_T0000115:1;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2152833	2167375	100	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000116;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG01358_ch_T0000116;Name=ZBED1
HG01358_chrY	CAT	exon	2152833	2157170	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000116;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000116;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01358_ch_T0000116:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2155033	2157117	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000116;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000116;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG01358_ch_T0000116:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2155033	2155035	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000116;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000116;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG01358_ch_T0000116;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2157115	2157117	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000116;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000116;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG01358_ch_T0000116;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2157171	2167215	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000116;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000116;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG01358_ch_T0000116:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2167216	2167375	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000116;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000116;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01358_ch_T0000116:1;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2152833	2167375	100	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000117;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG01358_ch_T0000117;Name=ZBED1
HG01358_chrY	CAT	exon	2152833	2157167	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000117;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000117;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01358_ch_T0000117:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2155033	2157117	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000117;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000117;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG01358_ch_T0000117:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2155033	2155035	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000117;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000117;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG01358_ch_T0000117;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2157115	2157117	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000117;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000117;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG01358_ch_T0000117;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2157168	2167215	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000117;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000117;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG01358_ch_T0000117:0;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2167216	2167375	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000117;gene_id=HG01358_ch_G0000028;Parent=HG01358_ch_T0000117;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01358_ch_T0000117:1;Name=ZBED1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2231231	2274791	.	-	.	source_gene_common_name=LOC101928092;source_gene=hg002_chrY_paternal_36;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;gene_id=HG01358_ch_G0000029;gene_biotype=lncRNA;gene_name=LOC101928092;gene_sources=liftoff;ID=HG01358_ch_G0000029;Name=LOC101928092
HG01358_chrY	CAT	transcript	2231231	2239797	1000	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01358_ch_T0000118;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01358_ch_T0000118;Name=LOC101928092
HG01358_chrY	CAT	exon	2231231	2232494	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01358_ch_T0000118;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000118;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000118:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2232495	2235211	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01358_ch_T0000118;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000118;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000118:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2235212	2235367	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01358_ch_T0000118;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000118;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000118:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2235368	2239259	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01358_ch_T0000118;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000118;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000118:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2239260	2239797	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01358_ch_T0000118;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000118;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000118:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2231231	2239797	1000	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01358_ch_T0000119;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01358_ch_T0000119;Name=LOC101928092
HG01358_chrY	CAT	exon	2231231	2232494	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01358_ch_T0000119;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000119;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000119:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2232495	2235211	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01358_ch_T0000119;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000119;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000119:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2235212	2235367	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01358_ch_T0000119;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000119;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000119:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2235368	2239276	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01358_ch_T0000119;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000119;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000119:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2239277	2239797	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01358_ch_T0000119;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000119;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000119:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2231231	2274723	1000	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01358_ch_T0000120;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01358_ch_T0000120;Name=LOC101928092
HG01358_chrY	CAT	exon	2231231	2232494	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01358_ch_T0000120;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000120;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000120:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2232495	2235211	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01358_ch_T0000120;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000120;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000120:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2235212	2235367	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01358_ch_T0000120;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000120;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000120:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2235368	2274656	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01358_ch_T0000120;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000120;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000120:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2274657	2274723	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01358_ch_T0000120;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000120;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000120:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2231231	2274734	1000	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01358_ch_T0000121;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01358_ch_T0000121;Name=LOC101928092
HG01358_chrY	CAT	exon	2231231	2232494	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01358_ch_T0000121;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000121:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2232495	2235211	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01358_ch_T0000121;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000121:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2235212	2235367	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01358_ch_T0000121;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000121:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2235368	2239259	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01358_ch_T0000121;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000121:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2239260	2239453	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01358_ch_T0000121;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000121:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2239454	2274656	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01358_ch_T0000121;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000121:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2274657	2274734	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01358_ch_T0000121;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000121:3;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2231231	2274791	1000	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG01358_ch_T0000122;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01358_ch_T0000122;Name=LOC101928092
HG01358_chrY	CAT	exon	2231231	2232494	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG01358_ch_T0000122;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000122;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000122:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2232495	2274656	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG01358_ch_T0000122;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000122;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01358_ch_T0000122:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2274657	2274791	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG01358_ch_T0000122;gene_id=HG01358_ch_G0000029;Parent=HG01358_ch_T0000122;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01358_ch_T0000122:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2274742	2274803	.	+	.	source_gene_common_name=MIR6089;source_gene=hg002_chrY_paternal_37;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;gene_id=HG01358_ch_G0000030;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG01358_ch_G0000030;Name=MIR6089
HG01358_chrY	CAT	transcript	2274742	2274805	1000	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG01358_ch_T0000123;gene_id=HG01358_ch_G0000030;Parent=HG01358_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG01358_ch_T0000123;Name=MIR6089
HG01358_chrY	CAT	exon	2274742	2274805	.	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG01358_ch_T0000123;gene_id=HG01358_ch_G0000030;Parent=HG01358_ch_T0000123;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG01358_ch_T0000123:0;Name=MIR6089;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2274780	2274803	1000	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG01358_ch_T0000124;gene_id=HG01358_ch_G0000030;Parent=HG01358_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG01358_ch_T0000124;Name=MIR6089
HG01358_chrY	CAT	exon	2274780	2274803	.	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG01358_ch_T0000124;gene_id=HG01358_ch_G0000030;Parent=HG01358_ch_T0000124;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG01358_ch_T0000124:0;Name=MIR6089;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2274816	2323604	.	+	.	source_gene_common_name=CD99P1;source_gene=hg002_chrY_paternal_38;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;gene_id=HG01358_ch_G0000031;gene_biotype=transcribed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG01358_ch_G0000031;Name=CD99P1
HG01358_chrY	CAT	transcript	2274816	2304702	1000	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG01358_ch_T0000125;Name=CD99P1
HG01358_chrY	CAT	exon	2274816	2275020	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:0;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2275021	2276520	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:0;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2276521	2276563	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:1;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2276564	2277666	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:1;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2277667	2277735	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:2;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2277736	2281332	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:2;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2281333	2281486	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:3;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2281487	2284254	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:3;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2284255	2284299	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:4;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2284300	2284943	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:4;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2284944	2285012	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:5;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2285013	2288207	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:5;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2288208	2288252	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:6;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2288253	2288902	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:6;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2288903	2288971	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:7;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2288972	2292116	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:7;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2292117	2292162	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:8;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2292163	2304346	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000125:8;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2304347	2304702	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01358_ch_T0000125;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000125;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000125:9;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2274816	2323604	1000	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG01358_ch_T0000126;Name=CD99P1
HG01358_chrY	CAT	exon	2274816	2275020	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:0;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2275021	2276520	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000126:0;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2276521	2276563	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:1;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2276564	2277666	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000126:1;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2277667	2277735	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:2;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2277736	2281332	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000126:2;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2281333	2281486	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:3;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2281487	2284254	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000126:3;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2284255	2284299	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:4;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2284300	2284943	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000126:4;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2284944	2285012	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:5;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2285013	2288902	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000126:5;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2288903	2288971	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:6;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2288972	2292116	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000126:6;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2292117	2292162	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:7;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2292163	2321401	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01358_ch_T0000126:7;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2321402	2323604	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01358_ch_T0000126;gene_id=HG01358_ch_G0000031;Parent=HG01358_ch_T0000126;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01358_ch_T0000126:8;Name=CD99P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2278508	2280864	.	-	.	source_gene_common_name=LINC00102;source_gene=hg002_chrY_paternal_39;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;gene_id=HG01358_ch_G0000032;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG01358_ch_G0000032;Name=LINC00102
HG01358_chrY	CAT	transcript	2278508	2280864	1000	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG01358_ch_T0000127;gene_id=HG01358_ch_G0000032;Parent=HG01358_ch_G0000032;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=HG01358_ch_T0000127;Name=LINC00102
HG01358_chrY	CAT	exon	2278508	2279213	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG01358_ch_T0000127;gene_id=HG01358_ch_G0000032;Parent=HG01358_ch_T0000127;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG01358_ch_T0000127:0;Name=LINC00102;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2279214	2280233	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG01358_ch_T0000127;gene_id=HG01358_ch_G0000032;Parent=HG01358_ch_T0000127;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=intron:HG01358_ch_T0000127:0;Name=LINC00102;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2280234	2280864	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG01358_ch_T0000127;gene_id=HG01358_ch_G0000032;Parent=HG01358_ch_T0000127;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG01358_ch_T0000127:1;Name=LINC00102;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2357268	2407317	.	+	.	source_gene_common_name=CD99;source_gene=hg002_chrY_paternal_40;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;gene_id=HG01358_ch_G0000033;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000033;Name=CD99
HG01358_chrY	CAT	transcript	2357268	2402444	100	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01358_ch_T0000128;Name=CD99
HG01358_chrY	CAT	exon	2357268	2357400	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2357334	2357400	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2357334	2357336	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01358_ch_T0000128;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2357401	2380427	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000128:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2380428	2380460	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2380428	2380460	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2380461	2383613	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000128:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2383614	2383661	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2383614	2383661	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2383662	2385667	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000128:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2385668	2385712	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2385668	2385712	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2385713	2386362	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000128:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2386363	2386431	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2386363	2386431	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2386432	2388634	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000128:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2388635	2388682	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2388635	2388682	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2388683	2389321	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000128:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2389322	2389372	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2389322	2389372	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2389373	2392268	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000128:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2392269	2392382	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2392269	2392382	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2392383	2399363	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000128:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2399364	2402444	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000128:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2399364	2399371	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000128:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2399369	2399371	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000128;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000128;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01358_ch_T0000128;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2357268	2407317	100	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01358_ch_T0000129;Name=CD99
HG01358_chrY	CAT	exon	2357268	2357400	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2357334	2357400	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2357334	2357336	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01358_ch_T0000129;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2357401	2380427	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000129:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2380428	2380460	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2380428	2380460	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2380461	2385667	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000129:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2385668	2385712	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2385668	2385712	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2385713	2386362	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000129:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2386363	2386431	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2386363	2386431	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2386432	2388634	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000129:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2388635	2388682	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2388635	2388682	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2388683	2389321	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000129:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2389322	2389372	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2389322	2389372	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2389373	2392268	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000129:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2392269	2392382	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2392269	2392382	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2392383	2404207	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000129:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2404208	2404264	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2404208	2404264	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2404265	2406785	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000129:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2406786	2407317	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000129:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2406786	2406811	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000129:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2406809	2406811	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000129;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000129;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01358_ch_T0000129;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2357268	2407317	100	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01358_ch_T0000130;Name=CD99
HG01358_chrY	CAT	exon	2357268	2357400	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2357334	2357400	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2357334	2357336	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01358_ch_T0000130;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2357401	2380427	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2380428	2380460	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2380428	2380460	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2380461	2383613	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2383614	2383661	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2383614	2383661	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2383662	2385667	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2385668	2385712	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2385668	2385712	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2385713	2386362	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2386363	2386431	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2386363	2386431	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2386432	2388634	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2388635	2388682	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2388635	2388682	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2388683	2389321	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2389322	2389372	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2389322	2389372	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2389373	2392268	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2392269	2392382	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2392269	2392382	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2392383	2404210	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2404211	2404264	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2404211	2404264	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2404265	2406785	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000130:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2406786	2407317	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000130:9;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2406786	2406811	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000130:9;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2406809	2406811	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000130;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000130;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01358_ch_T0000130;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2357268	2407317	100	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01358_ch_T0000131;Name=CD99
HG01358_chrY	CAT	exon	2357268	2357400	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2357334	2357400	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2357334	2357336	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01358_ch_T0000131;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2357401	2380427	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000131:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2380428	2380460	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2380428	2380460	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2380461	2385667	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000131:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2385668	2385712	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2385668	2385712	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2385713	2386362	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000131:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2386363	2386431	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2386363	2386431	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2386432	2388634	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000131:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2388635	2388682	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2388635	2388682	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2388683	2389321	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000131:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2389322	2389372	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2389322	2389372	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2389373	2392268	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000131:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2392269	2392382	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2392269	2392382	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2392383	2404210	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000131:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2404211	2404264	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2404211	2404264	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2404265	2406785	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000131:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2406786	2407317	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000131:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2406786	2406811	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000131:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2406809	2406811	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000131;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01358_ch_T0000131;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2357268	2407317	100	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01358_ch_T0000132;Name=CD99
HG01358_chrY	CAT	exon	2357268	2357400	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2357334	2357400	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2357334	2357336	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01358_ch_T0000132;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2357401	2380427	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000132:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2380428	2380460	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2380428	2380460	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2380461	2383613	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000132:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2383614	2383661	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2383614	2383661	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2383662	2385667	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000132:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2385668	2385712	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2385668	2385712	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2385713	2386362	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000132:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2386363	2386431	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2386363	2386431	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2386432	2388634	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000132:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2388635	2388682	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2388635	2388682	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2388683	2392268	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000132:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2392269	2392382	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2392269	2392382	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2392383	2404207	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000132:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2404208	2404264	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2404208	2404264	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2404265	2406785	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000132:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2406786	2407317	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000132:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2406786	2406811	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000132:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2406809	2406811	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000132;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01358_ch_T0000132;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2357268	2407317	100	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01358_ch_T0000133;Name=CD99
HG01358_chrY	CAT	exon	2357268	2357400	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2357334	2357400	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2357334	2357336	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01358_ch_T0000133;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2357401	2380427	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2380428	2380460	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2380428	2380460	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2380461	2383613	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2383614	2383661	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2383614	2383661	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2383662	2385667	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2385668	2385712	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2385668	2385712	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2385713	2386362	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2386363	2386431	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2386363	2386431	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2386432	2388634	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2388635	2388682	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2388635	2388682	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2388683	2389321	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2389322	2389372	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2389322	2389372	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2389373	2392268	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2392269	2392382	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2392269	2392382	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2392383	2404207	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2404208	2404264	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2404208	2404264	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2404265	2406785	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01358_ch_T0000133:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2406786	2407317	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01358_ch_T0000133:9;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2406786	2406811	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01358_ch_T0000133:9;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2406809	2406811	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000133;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01358_ch_T0000133;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2357268	2407317	1000	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_G0000033;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=HG01358_ch_T0000134;Name=CD99
HG01358_chrY	CAT	exon	2357268	2357400	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2357401	2380427	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:0;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2380428	2380460	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2380461	2383613	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:1;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2383614	2383661	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2383662	2385667	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:2;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2385668	2385712	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2385713	2386362	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:3;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2386363	2386431	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2386432	2388634	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:4;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2388635	2388682	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2388683	2389321	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:5;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2389322	2389372	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2389373	2392268	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:6;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2392269	2392382	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2392383	2399363	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:7;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2399364	2399381	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2399382	2404210	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:8;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2404211	2404264	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:9;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2404265	2406785	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01358_ch_T0000134:9;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2406786	2407317	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000134;gene_id=HG01358_ch_G0000033;Parent=HG01358_ch_T0000134;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01358_ch_T0000134:10;Name=CD99;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2418337	2440900	.	+	.	source_gene_common_name=XGY2;source_gene=hg002_chrY_paternal_41;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;gene_id=HG01358_ch_G0000034;gene_biotype=transcribed_pseudogene;gene_name=XGY2;gene_sources=liftoff;ID=HG01358_ch_G0000034;Name=XGY2
HG01358_chrY	CAT	transcript	2418337	2440900	1000	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01358_ch_T0000135;gene_id=HG01358_ch_G0000034;Parent=HG01358_ch_G0000034;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=HG01358_ch_T0000135;Name=XGY2
HG01358_chrY	CAT	exon	2418337	2418376	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01358_ch_T0000135;gene_id=HG01358_ch_G0000034;Parent=HG01358_ch_T0000135;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG01358_ch_T0000135:0;Name=XGY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2418377	2436581	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01358_ch_T0000135;gene_id=HG01358_ch_G0000034;Parent=HG01358_ch_T0000135;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG01358_ch_T0000135:0;Name=XGY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2436582	2436623	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01358_ch_T0000135;gene_id=HG01358_ch_G0000034;Parent=HG01358_ch_T0000135;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG01358_ch_T0000135:1;Name=XGY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2436624	2440619	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01358_ch_T0000135;gene_id=HG01358_ch_G0000034;Parent=HG01358_ch_T0000135;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG01358_ch_T0000135:1;Name=XGY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2440620	2440900	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01358_ch_T0000135;gene_id=HG01358_ch_G0000034;Parent=HG01358_ch_T0000135;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG01358_ch_T0000135:2;Name=XGY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2452752	2453579	.	-	.	source_gene_common_name=SRY;source_gene=hg002_chrY_paternal_43;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;gene_id=HG01358_ch_G0000035;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000035;Name=SRY
HG01358_chrY	CAT	transcript	2452752	2453579	100	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000136;gene_id=HG01358_ch_G0000035;Parent=HG01358_ch_G0000035;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=HG01358_ch_T0000136;Name=SRY
HG01358_chrY	CAT	exon	2452752	2453579	.	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000136;gene_id=HG01358_ch_G0000035;Parent=HG01358_ch_T0000136;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=exon:HG01358_ch_T0000136:0;Name=SRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2452886	2453500	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000136;gene_id=HG01358_ch_G0000035;Parent=HG01358_ch_T0000136;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=CDS:HG01358_ch_T0000136:0;Name=SRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2452886	2452888	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000136;gene_id=HG01358_ch_G0000035;Parent=HG01358_ch_T0000136;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=stop_codon:HG01358_ch_T0000136;Name=SRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2453498	2453500	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000136;gene_id=HG01358_ch_G0000035;Parent=HG01358_ch_T0000136;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=start_codon:HG01358_ch_T0000136;Name=SRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2507500	2533166	.	+	.	source_gene_common_name=RPS4Y1;source_gene=hg002_chrY_paternal_46;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;gene_id=HG01358_ch_G0000036;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000036;Name=RPS4Y1
HG01358_chrY	CAT	transcript	2507500	2533166	100	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG01358_ch_T0000137;Name=RPS4Y1
HG01358_chrY	CAT	exon	2507500	2507525	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000137:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2507523	2507525	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000137:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2507523	2507525	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG01358_ch_T0000137;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2507526	2508062	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000137:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2508063	2508140	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000137:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2508063	2508140	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000137:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2508141	2509974	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000137:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2509975	2510155	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000137:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2509975	2510155	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000137:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2510156	2511543	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000137:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2511544	2511641	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000137:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2511544	2511641	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000137:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2511642	2520497	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000137:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2520498	2520669	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000137:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2520498	2520669	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000137:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2520670	2530985	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000137:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2530986	2531143	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000137:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2530986	2531143	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000137:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2531144	2532690	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000137:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2532691	2533166	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000137:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2532691	2532792	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000137:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2532790	2532792	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000137;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000137;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG01358_ch_T0000137;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2507500	2533166	100	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG01358_ch_T0000138;Name=RPS4Y1
HG01358_chrY	CAT	exon	2507500	2507871	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000138:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2507842	2507871	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000138:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2507842	2507844	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG01358_ch_T0000138;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2507872	2508062	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000138:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2508063	2508140	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000138:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2508063	2508140	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000138:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2508141	2509974	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000138:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2509975	2510155	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000138:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2509975	2510155	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000138:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2510156	2511543	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000138:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2511544	2511641	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000138:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2511544	2511641	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000138:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2511642	2520497	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000138:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2520498	2520669	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000138:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2520498	2520669	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000138:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2520670	2530985	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000138:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2530986	2531143	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000138:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2530986	2531143	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000138:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2531144	2532690	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01358_ch_T0000138:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2532691	2533166	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01358_ch_T0000138:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2532691	2532792	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01358_ch_T0000138:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2532790	2532792	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000138;gene_id=HG01358_ch_G0000036;Parent=HG01358_ch_T0000138;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG01358_ch_T0000138;Name=RPS4Y1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2601634	2648754	.	+	.	source_gene_common_name=ZFY;source_gene=hg002_chrY_paternal_49;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;gene_id=HG01358_ch_G0000037;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000037;Name=ZFY
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000139;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2602022	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2602023	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627339	2627894	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2627339	2627341	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000139;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000139:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000139;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000139;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000140;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2601699	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2601700	2620156	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2620157	2620245	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2620185	2620245	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2620185	2620187	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000140;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2620246	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2642917	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2642918	2643070	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2642918	2643070	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2643071	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000140:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000140:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000140:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000140:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000140;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000140;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000141;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2601699	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2601700	2620156	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2620157	2620245	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2620185	2620245	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2620185	2620187	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000141;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2620246	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627322	2627894	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000141:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2642917	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000141:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2642918	2643070	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000141:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2642918	2643070	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000141:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2643071	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000141:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000141:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000141:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000141:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000141:7;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000141:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000141;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000141;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000142;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2602022	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2602023	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627339	2627894	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2627339	2627341	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000142;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2642917	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2642918	2643070	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2642918	2643070	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2643071	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000142:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000142:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000142:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000142:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000142;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000142;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000143;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2601699	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2601700	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627339	2627894	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2627339	2627341	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000143;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2642917	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2642918	2643070	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2642918	2643070	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2643071	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000143:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000143;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000143;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000144;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2601888	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2601889	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627339	2627894	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2627339	2627341	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000144;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2642917	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2642918	2643070	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2642918	2643070	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2643071	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000144;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000144;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000145;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2602022	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2602023	2620156	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2620157	2620245	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2620185	2620245	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2620185	2620187	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000145;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2620246	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627322	2627894	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000145:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000145;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000145;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000146;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2601699	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2601700	2620156	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2620157	2620245	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2620185	2620245	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2620185	2620187	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000146;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2620246	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627322	2627894	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000146:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000146:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000146:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000146:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000146;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000146;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000147;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2601699	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2601700	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627339	2627894	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2627339	2627341	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000147;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000148;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2601699	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2601700	2620156	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2620157	2620245	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2620185	2620245	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2620185	2620187	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2620246	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000148;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000149;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2602022	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2602023	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641408	2641492	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2641408	2641410	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000149;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000150;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2602022	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2602023	2620156	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2620157	2620245	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2620185	2620245	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2620185	2620187	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2620246	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627322	2627894	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2642917	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2642918	2643070	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2642918	2643070	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2643071	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000150:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000150:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000150:7;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000150:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000150;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2601634	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000151;Name=ZFY
HG01358_chrY	CAT	exon	2601634	2601888	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2601889	2620156	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2620157	2620245	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2620185	2620245	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2620185	2620187	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2620246	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627322	2627894	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2642917	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2642918	2643070	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2642918	2643070	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2643071	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000151:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000151:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000151:7;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000151:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000151;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	2612430	2648754	100	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01358_ch_T0000152;Name=ZFY
HG01358_chrY	CAT	exon	2612430	2612527	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2612528	2620156	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2620157	2620245	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2620185	2620245	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	2620185	2620187	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01358_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2620246	2627321	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2627322	2627894	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2627322	2627894	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2627895	2641342	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641343	2641492	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641343	2641492	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641493	2641758	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2641759	2641902	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2641759	2641902	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2641903	2642917	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2642918	2643070	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2642918	2643070	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2643071	2644187	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2644188	2644328	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000152:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2644188	2644328	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2644329	2645057	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01358_ch_T0000152:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2645058	2648754	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01358_ch_T0000152:7;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	2645058	2646241	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01358_ch_T0000152:6;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	2646239	2646241	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000152;gene_id=HG01358_ch_G0000037;Parent=HG01358_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01358_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2633067	2668874	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=hg002_chrY_paternal_50;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;gene_id=HG01358_ch_G0000038;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG01358_ch_G0000038;Name=ZFY-AS1
HG01358_chrY	CAT	transcript	2633067	2668874	1000	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01358_ch_T0000153;gene_id=HG01358_ch_G0000038;Parent=HG01358_ch_G0000038;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=HG01358_ch_T0000153;Name=ZFY-AS1
HG01358_chrY	CAT	exon	2633067	2633187	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01358_ch_T0000153;gene_id=HG01358_ch_G0000038;Parent=HG01358_ch_T0000153;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG01358_ch_T0000153:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2633188	2648085	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01358_ch_T0000153;gene_id=HG01358_ch_G0000038;Parent=HG01358_ch_T0000153;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG01358_ch_T0000153:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2648086	2648175	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01358_ch_T0000153;gene_id=HG01358_ch_G0000038;Parent=HG01358_ch_T0000153;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG01358_ch_T0000153:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2648176	2668560	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01358_ch_T0000153;gene_id=HG01358_ch_G0000038;Parent=HG01358_ch_T0000153;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG01358_ch_T0000153:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2668561	2668874	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01358_ch_T0000153;gene_id=HG01358_ch_G0000038;Parent=HG01358_ch_T0000153;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG01358_ch_T0000153:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	2669244	2768516	.	+	.	source_gene_common_name=LINC00278;source_gene=hg002_chrY_paternal_52;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;gene_id=HG01358_ch_G0000039;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG01358_ch_G0000039;Name=LINC00278
HG01358_chrY	CAT	transcript	2669244	2768516	1000	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01358_ch_T0000154;gene_id=HG01358_ch_G0000039;Parent=HG01358_ch_G0000039;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=HG01358_ch_T0000154;Name=LINC00278
HG01358_chrY	CAT	exon	2669244	2669465	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01358_ch_T0000154;gene_id=HG01358_ch_G0000039;Parent=HG01358_ch_T0000154;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG01358_ch_T0000154:0;Name=LINC00278;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2669466	2745527	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01358_ch_T0000154;gene_id=HG01358_ch_G0000039;Parent=HG01358_ch_T0000154;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG01358_ch_T0000154:0;Name=LINC00278;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2745528	2745585	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01358_ch_T0000154;gene_id=HG01358_ch_G0000039;Parent=HG01358_ch_T0000154;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG01358_ch_T0000154:1;Name=LINC00278;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2745586	2763238	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01358_ch_T0000154;gene_id=HG01358_ch_G0000039;Parent=HG01358_ch_T0000154;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG01358_ch_T0000154:1;Name=LINC00278;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2763239	2763300	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01358_ch_T0000154;gene_id=HG01358_ch_G0000039;Parent=HG01358_ch_T0000154;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG01358_ch_T0000154:2;Name=LINC00278;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	2763301	2768328	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01358_ch_T0000154;gene_id=HG01358_ch_G0000039;Parent=HG01358_ch_T0000154;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG01358_ch_T0000154:2;Name=LINC00278;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	2768329	2768516	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01358_ch_T0000154;gene_id=HG01358_ch_G0000039;Parent=HG01358_ch_T0000154;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG01358_ch_T0000154:3;Name=LINC00278;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	3245317	3246291	.	+	.	source_gene_common_name=TGIF2LY;source_gene=hg002_chrY_paternal_55;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;gene_id=HG01358_ch_G0000040;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000040;Name=TGIF2LY
HG01358_chrY	CAT	transcript	3245317	3246291	100	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000155;gene_id=HG01358_ch_G0000040;Parent=HG01358_ch_G0000040;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=HG01358_ch_T0000155;Name=TGIF2LY
HG01358_chrY	CAT	exon	3245317	3245377	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000155;gene_id=HG01358_ch_G0000040;Parent=HG01358_ch_T0000155;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG01358_ch_T0000155:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	3245378	3245473	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000155;gene_id=HG01358_ch_G0000040;Parent=HG01358_ch_T0000155;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=intron:HG01358_ch_T0000155:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	3245474	3246291	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000155;gene_id=HG01358_ch_G0000040;Parent=HG01358_ch_T0000155;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG01358_ch_T0000155:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	3245495	3246052	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000155;gene_id=HG01358_ch_G0000040;Parent=HG01358_ch_T0000155;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=CDS:HG01358_ch_T0000155:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	3245495	3245497	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000155;gene_id=HG01358_ch_G0000040;Parent=HG01358_ch_T0000155;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=start_codon:HG01358_ch_T0000155;Name=TGIF2LY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	3246050	3246052	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000155;gene_id=HG01358_ch_G0000040;Parent=HG01358_ch_T0000155;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=stop_codon:HG01358_ch_T0000155;Name=TGIF2LY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	3466906	3501817	.	+	.	source_gene_common_name=LOC105377227;source_gene=hg002_chrY_paternal_58;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;gene_id=HG01358_ch_G0000041;gene_biotype=lncRNA;gene_name=LOC105377227;gene_sources=liftoff;ID=HG01358_ch_G0000041;Name=LOC105377227
HG01358_chrY	CAT	transcript	3466906	3477921	1000	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01358_ch_T0000156;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG01358_ch_T0000156;Name=LOC105377227
HG01358_chrY	CAT	exon	3466906	3470207	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01358_ch_T0000156;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000156;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000156:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	3470208	3470639	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01358_ch_T0000156;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000156;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01358_ch_T0000156:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	3470640	3470751	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01358_ch_T0000156;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000156;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000156:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	3470752	3475823	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01358_ch_T0000156;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000156;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01358_ch_T0000156:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	3475824	3477921	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01358_ch_T0000156;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000156;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000156:2;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	3466906	3499295	1000	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01358_ch_T0000157;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG01358_ch_T0000157;Name=LOC105377227
HG01358_chrY	CAT	exon	3466906	3470207	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01358_ch_T0000157;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000157;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000157:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	3470208	3470639	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01358_ch_T0000157;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000157;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01358_ch_T0000157:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	3470640	3470751	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01358_ch_T0000157;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000157;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000157:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	3470752	3475823	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01358_ch_T0000157;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000157;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01358_ch_T0000157:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	3475824	3475998	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01358_ch_T0000157;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000157;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000157:2;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	3475999	3498665	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01358_ch_T0000157;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000157;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01358_ch_T0000157:2;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	3498666	3499295	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01358_ch_T0000157;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000157;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000157:3;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	3466906	3501817	1000	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01358_ch_T0000158;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG01358_ch_T0000158;Name=LOC105377227
HG01358_chrY	CAT	exon	3466906	3470207	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01358_ch_T0000158;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000158;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000158:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	3470208	3470639	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01358_ch_T0000158;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000158;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01358_ch_T0000158:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	3470640	3470751	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01358_ch_T0000158;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000158;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000158:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	3470752	3501722	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01358_ch_T0000158;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000158;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01358_ch_T0000158:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	3501723	3501817	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01358_ch_T0000158;gene_id=HG01358_ch_G0000041;Parent=HG01358_ch_T0000158;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01358_ch_T0000158:2;Name=LOC105377227;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	4274657	4274695	.	+	.	source_gene_common_name=MIR9985;source_gene=hg002_chrY_paternal_62;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;gene_id=HG01358_ch_G0000042;gene_biotype=miRNA;gene_name=MIR9985;gene_sources=liftoff;ID=HG01358_ch_G0000042;Name=MIR9985
HG01358_chrY	CAT	transcript	4274657	4274765	1000	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG01358_ch_T0000159;gene_id=HG01358_ch_G0000042;Parent=HG01358_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG01358_ch_T0000159;Name=MIR9985
HG01358_chrY	CAT	exon	4274657	4274765	.	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG01358_ch_T0000159;gene_id=HG01358_ch_G0000042;Parent=HG01358_ch_T0000159;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG01358_ch_T0000159:0;Name=MIR9985;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	4274677	4274695	1000	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG01358_ch_T0000160;gene_id=HG01358_ch_G0000042;Parent=HG01358_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG01358_ch_T0000160;Name=MIR9985
HG01358_chrY	CAT	exon	4274677	4274695	.	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG01358_ch_T0000160;gene_id=HG01358_ch_G0000042;Parent=HG01358_ch_T0000160;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG01358_ch_T0000160:0;Name=MIR9985;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	4668849	5411250	.	+	.	source_gene_common_name=PCDH11Y;source_gene=hg002_chrY_paternal_64;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;gene_id=HG01358_ch_G0000043;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000043;Name=PCDH11Y
HG01358_chrY	CAT	transcript	4668849	4774150	100	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01358_ch_T0000161;Name=PCDH11Y
HG01358_chrY	CAT	exon	4668849	4669158	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000161:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4669159	4699450	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000161:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4699451	4699619	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000161:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4699620	4700457	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000161:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4700458	4700563	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000161:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4700564	4701221	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000161:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4701222	4701280	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000161:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4701249	4701280	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000161:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	4701249	4701251	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01358_ch_T0000161;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4701281	4725440	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000161:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4725441	4726011	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000161:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4725441	4726011	.	+	1	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000161:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4726012	4766766	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000161:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4766767	4769259	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000161:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4766767	4769259	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000161:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4769260	4772895	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000161:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4772896	4774150	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000161:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4772896	4772913	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000161:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	4772911	4772913	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000161;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01358_ch_T0000161;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	4668849	4774150	100	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01358_ch_T0000162;Name=PCDH11Y
HG01358_chrY	CAT	exon	4668849	4669158	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000162:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4669159	4700457	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000162:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4700458	4700563	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000162:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4700564	4701221	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000162:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4701222	4701280	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000162:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4701249	4701280	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000162:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	4701249	4701251	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01358_ch_T0000162;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4701281	4725440	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000162:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4725441	4726011	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000162:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4725441	4726011	.	+	1	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000162:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4726012	4766766	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000162:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4766767	4769259	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000162:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4766767	4769259	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000162:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4769260	4772895	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000162:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4772896	4774150	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000162:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4772896	4772913	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000162:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	4772911	4772913	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000162;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000162;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01358_ch_T0000162;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	4668849	5411246	100	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01358_ch_T0000163;Name=PCDH11Y
HG01358_chrY	CAT	exon	4668849	4669158	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000163:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4669159	4725440	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000163:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4725441	4726011	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000163:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4725652	4726011	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000163:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	4725652	4725654	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01358_ch_T0000163;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4726012	4766766	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000163:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4766767	4769259	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000163:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4766767	4769259	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000163:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4769260	5169625	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000163:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5169626	5169824	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000163:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5169626	5169824	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000163:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5169825	5250797	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000163:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5250798	5250821	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000163:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5250798	5250821	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000163:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5250822	5406293	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000163:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5406294	5411246	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000163:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5406294	5406964	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000163:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	5406962	5406964	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000163;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000163;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01358_ch_T0000163;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	4668849	5411250	100	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01358_ch_T0000164;Name=PCDH11Y
HG01358_chrY	CAT	exon	4668849	4669158	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4669159	4671240	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4671241	4675288	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4675289	4699450	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4699451	4699619	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4699620	4699766	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4699767	4699898	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4699899	4700457	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4700458	4700563	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4700564	4701221	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4701222	4701280	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4701249	4701280	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000164:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	4701249	4701251	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01358_ch_T0000164;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4701281	4725440	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4725441	4726011	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4725441	4726011	.	+	1	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000164:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4726012	4766766	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4766767	4769259	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4766767	4769259	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000164:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4769260	5169625	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5169626	5169824	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5169626	5169824	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000164:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5169825	5250797	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5250798	5250821	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5250798	5250821	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000164:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5250822	5406293	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000164:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5406294	5411250	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000164:10;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5406294	5406964	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000164:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	5406962	5406964	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000164;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01358_ch_T0000164;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	4668849	5411250	100	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01358_ch_T0000165;Name=PCDH11Y
HG01358_chrY	CAT	exon	4668849	4669158	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4669159	4699450	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4699451	4699619	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4699620	4699766	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4699767	4699898	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4699899	4700457	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4700458	4700563	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4700564	4701221	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4701222	4701280	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4701249	4701280	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000165:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	4701249	4701251	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01358_ch_T0000165;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4701281	4725440	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4725441	4726011	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4725441	4726011	.	+	1	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000165:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4726012	4766766	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4766767	4769259	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4766767	4769259	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000165:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4769260	5169625	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5169626	5169824	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5169626	5169824	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000165:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5169825	5250797	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5250798	5250821	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5250798	5250821	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000165:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5250822	5406293	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000165:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5406294	5411250	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000165:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5406294	5406964	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000165:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	5406962	5406964	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000165;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01358_ch_T0000165;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	4668849	5411250	100	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01358_ch_T0000166;Name=PCDH11Y
HG01358_chrY	CAT	exon	4668849	4669158	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4669159	4671240	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000166:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4671241	4671311	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4671312	4700457	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000166:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4700458	4700563	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4700564	4701221	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000166:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4701222	4701280	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4701249	4701280	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000166:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	4701249	4701251	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01358_ch_T0000166;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4701281	4725440	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000166:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4725441	4726011	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4725441	4726011	.	+	1	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000166:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4726012	4766766	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000166:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4766767	4769259	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4766767	4769259	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000166:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4769260	5169625	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000166:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5169626	5169824	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5169626	5169824	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000166:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5169825	5250797	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000166:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5250798	5250821	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5250798	5250821	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000166:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5250822	5406293	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000166:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5406294	5411250	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000166:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5406294	5406964	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000166:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	5406962	5406964	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000166;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01358_ch_T0000166;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	4724640	4774150	100	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01358_ch_T0000167;Name=PCDH11Y
HG01358_chrY	CAT	exon	4724640	4726011	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000167:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4725376	4726011	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000167:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	4725376	4725378	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01358_ch_T0000167;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4726012	4766766	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000167:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4766767	4769259	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000167:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4766767	4769259	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000167:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4769260	4772895	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000167:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4772896	4774150	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000167:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4772896	4772913	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000167:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	4772911	4772913	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000167;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01358_ch_T0000167;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	4724642	5411250	100	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01358_ch_T0000168;Name=PCDH11Y
HG01358_chrY	CAT	exon	4724642	4726011	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4725376	4726011	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	4725376	4725378	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01358_ch_T0000168;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4726012	4766766	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	4766767	4769259	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	4766767	4769259	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	4769260	5169625	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5169626	5169824	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5169626	5169824	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5169825	5250797	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5250798	5250821	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5250798	5250821	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5250822	5406293	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01358_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5406294	5411250	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01358_ch_T0000168:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5406294	5406964	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01358_ch_T0000168:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	5406962	5406964	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000168;gene_id=HG01358_ch_G0000043;Parent=HG01358_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01358_ch_T0000168;Name=PCDH11Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	5911469	5912633	.	-	.	source_gene_common_name=TTTY23B;source_gene=hg002_chrY_paternal_257;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;gene_id=HG01358_ch_G0000044;gene_biotype=lncRNA;gene_name=TTTY23B;gene_sources=liftoff;ID=HG01358_ch_G0000044;Name=TTTY23B
HG01358_chrY	CAT	transcript	5911469	5912633	1000	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01358_ch_T0000169;gene_id=HG01358_ch_G0000044;Parent=HG01358_ch_G0000044;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=HG01358_ch_T0000169;Name=TTTY23B
HG01358_chrY	CAT	exon	5911469	5911777	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01358_ch_T0000169;gene_id=HG01358_ch_G0000044;Parent=HG01358_ch_T0000169;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG01358_ch_T0000169:0;Name=TTTY23B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5911778	5912317	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01358_ch_T0000169;gene_id=HG01358_ch_G0000044;Parent=HG01358_ch_T0000169;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG01358_ch_T0000169:0;Name=TTTY23B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5912318	5912463	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01358_ch_T0000169;gene_id=HG01358_ch_G0000044;Parent=HG01358_ch_T0000169;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG01358_ch_T0000169:1;Name=TTTY23B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5912464	5912576	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01358_ch_T0000169;gene_id=HG01358_ch_G0000044;Parent=HG01358_ch_T0000169;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG01358_ch_T0000169:1;Name=TTTY23B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5912577	5912633	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01358_ch_T0000169;gene_id=HG01358_ch_G0000044;Parent=HG01358_ch_T0000169;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG01358_ch_T0000169:2;Name=TTTY23B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	5915246	5918041	.	+	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;gene_id=HG01358_ch_G0000045;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff;ID=HG01358_ch_G0000045;Name=TSPY2
HG01358_chrY	CAT	transcript	5915246	5918041	100	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_G0000045;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG01358_ch_T0000170;Name=TSPY2
HG01358_chrY	CAT	exon	5915246	5915777	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000170:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5915292	5915777	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000170:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	5915292	5915294	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG01358_ch_T0000170;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5915778	5916378	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000170:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916379	5916456	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000170:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916379	5916456	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000170:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916457	5916584	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000170:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916585	5916696	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000170:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916585	5916696	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000170:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916697	5916804	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000170:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916805	5916943	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000170:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916805	5916943	.	+	2	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000170:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916944	5917049	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000170:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5917050	5917131	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000170:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5917050	5917101	.	+	1	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000170:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	5917099	5917101	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG01358_ch_T0000170;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5917132	5917825	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000170:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5917826	5918041	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000170;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000170;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000170:5;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	5915246	5918041	100	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_G0000045;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG01358_ch_T0000171;Name=TSPY2
HG01358_chrY	CAT	exon	5915246	5915777	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000171:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5915292	5915777	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000171:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	5915292	5915294	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG01358_ch_T0000171;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5915778	5916378	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000171:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916379	5916456	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000171:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916379	5916456	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000171:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916457	5916584	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000171:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916585	5916696	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000171:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916585	5916696	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000171:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916697	5916797	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000171:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916798	5916943	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000171:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916798	5916943	.	+	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000171:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916944	5917049	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000171:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5917050	5917131	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000171:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5917050	5917131	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000171:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5917132	5917825	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000171:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5917826	5918041	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000171:5;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5917826	5917848	.	+	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000171:5;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	5917846	5917848	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000171;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000171;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG01358_ch_T0000171;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	5915246	5918041	100	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_G0000045;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG01358_ch_T0000172;Name=TSPY2
HG01358_chrY	CAT	exon	5915246	5915777	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000172:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5915292	5915777	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000172:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	5915292	5915294	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG01358_ch_T0000172;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5915778	5916378	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000172:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916379	5916456	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000172:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916379	5916456	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000172:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916457	5916584	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000172:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916585	5916696	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000172:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916585	5916696	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000172:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916697	5916797	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000172:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916798	5916943	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000172:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5916798	5916943	.	+	2	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000172:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916944	5917038	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000172:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5917039	5917131	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000172:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	5917039	5917101	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000172:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	5917099	5917101	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG01358_ch_T0000172;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5917132	5917825	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01358_ch_T0000172:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5917826	5918041	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000172;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000172;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000172:5;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	5915246	5918041	1000	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_G0000045;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=HG01358_ch_T0000173;Name=TSPY2
HG01358_chrY	CAT	exon	5915246	5915777	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01358_ch_T0000173:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5915778	5916378	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01358_ch_T0000173:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916379	5916456	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01358_ch_T0000173:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916457	5916584	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01358_ch_T0000173:1;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916585	5916696	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01358_ch_T0000173:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916697	5916804	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01358_ch_T0000173:2;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5916805	5916943	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01358_ch_T0000173:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5916944	5917038	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01358_ch_T0000173:3;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5917039	5917131	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01358_ch_T0000173:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5917132	5917825	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01358_ch_T0000173:4;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5917826	5918041	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG01358_ch_T0000173;gene_id=HG01358_ch_G0000045;Parent=HG01358_ch_T0000173;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01358_ch_T0000173:5;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	5927356	5932959	.	-	.	source_gene_common_name=FAM197Y9;source_gene=hg002_chrY_paternal_255;gene_id=HG01358_ch_G0000046;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG01358_ch_G0000046;Name=FAM197Y9
HG01358_chrY	CAT	transcript	5927356	5932959	1000	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG01358_ch_T0000174;gene_id=HG01358_ch_G0000046;Parent=HG01358_ch_G0000046;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=HG01358_ch_T0000174;Name=FAM197Y9
HG01358_chrY	CAT	exon	5927356	5927415	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG01358_ch_T0000174;gene_id=HG01358_ch_G0000046;Parent=HG01358_ch_T0000174;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG01358_ch_T0000174:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5927416	5930966	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG01358_ch_T0000174;gene_id=HG01358_ch_G0000046;Parent=HG01358_ch_T0000174;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG01358_ch_T0000174:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5930967	5931125	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG01358_ch_T0000174;gene_id=HG01358_ch_G0000046;Parent=HG01358_ch_T0000174;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG01358_ch_T0000174:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5931126	5932625	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG01358_ch_T0000174;gene_id=HG01358_ch_G0000046;Parent=HG01358_ch_T0000174;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG01358_ch_T0000174:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5932626	5932771	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG01358_ch_T0000174;gene_id=HG01358_ch_G0000046;Parent=HG01358_ch_T0000174;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG01358_ch_T0000174:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	5932772	5932857	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG01358_ch_T0000174;gene_id=HG01358_ch_G0000046;Parent=HG01358_ch_T0000174;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG01358_ch_T0000174:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	5932858	5932959	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG01358_ch_T0000174;gene_id=HG01358_ch_G0000046;Parent=HG01358_ch_T0000174;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG01358_ch_T0000174:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6026242	6030448	.	-	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_251;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;gene_id=HG01358_ch_G0000047;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG01358_ch_G0000047;Name=LINC00280
HG01358_chrY	CAT	transcript	6026242	6030448	1000	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01358_ch_T0000175;gene_id=HG01358_ch_G0000047;Parent=HG01358_ch_G0000047;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=HG01358_ch_T0000175;Name=LINC00280
HG01358_chrY	CAT	exon	6026242	6026460	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01358_ch_T0000175;gene_id=HG01358_ch_G0000047;Parent=HG01358_ch_T0000175;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG01358_ch_T0000175:0;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6026461	6027718	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01358_ch_T0000175;gene_id=HG01358_ch_G0000047;Parent=HG01358_ch_T0000175;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG01358_ch_T0000175:0;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6027719	6027861	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01358_ch_T0000175;gene_id=HG01358_ch_G0000047;Parent=HG01358_ch_T0000175;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG01358_ch_T0000175:1;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6027862	6030362	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01358_ch_T0000175;gene_id=HG01358_ch_G0000047;Parent=HG01358_ch_T0000175;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG01358_ch_T0000175:1;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6030363	6030448	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01358_ch_T0000175;gene_id=HG01358_ch_G0000047;Parent=HG01358_ch_T0000175;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG01358_ch_T0000175:2;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6030518	6032606	.	-	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;alternative_source_transcripts=hg002_chrY_paternal_78.1;gene_id=HG01358_ch_G0000048;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=transMap;ID=HG01358_ch_G0000048;Name=TTTY22
HG01358_chrY	CAT	transcript	6030518	6032606	1000	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=94.146;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=HG01358_ch_T0000176;gene_id=HG01358_ch_G0000048;Parent=HG01358_ch_G0000048;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=HG01358_ch_T0000176;Name=TTTY22
HG01358_chrY	CAT	exon	6030518	6030563	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=94.146;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=HG01358_ch_T0000176;gene_id=HG01358_ch_G0000048;Parent=HG01358_ch_T0000176;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01358_ch_T0000176:0;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6030564	6032451	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=94.146;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=HG01358_ch_T0000176;gene_id=HG01358_ch_G0000048;Parent=HG01358_ch_T0000176;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01358_ch_T0000176:0;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6032452	6032606	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=94.146;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=HG01358_ch_T0000176;gene_id=HG01358_ch_G0000048;Parent=HG01358_ch_T0000176;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01358_ch_T0000176:1;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6035548	6038959	.	-	.	source_gene_common_name=LOC107987353;source_gene=hg002_chrY_paternal_250;gene_id=HG01358_ch_G0000049;gene_biotype=lncRNA;gene_name=LOC107987353;gene_sources=liftoff;ID=HG01358_ch_G0000049;Name=LOC107987353
HG01358_chrY	CAT	transcript	6035548	6038959	1000	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG01358_ch_T0000177;gene_id=HG01358_ch_G0000049;Parent=HG01358_ch_G0000049;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=HG01358_ch_T0000177;Name=LOC107987353
HG01358_chrY	CAT	exon	6035548	6035810	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG01358_ch_T0000177;gene_id=HG01358_ch_G0000049;Parent=HG01358_ch_T0000177;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG01358_ch_T0000177:0;Name=LOC107987353;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6035811	6038341	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG01358_ch_T0000177;gene_id=HG01358_ch_G0000049;Parent=HG01358_ch_T0000177;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG01358_ch_T0000177:0;Name=LOC107987353;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6038342	6038414	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG01358_ch_T0000177;gene_id=HG01358_ch_G0000049;Parent=HG01358_ch_T0000177;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG01358_ch_T0000177:1;Name=LOC107987353;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6038415	6038790	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG01358_ch_T0000177;gene_id=HG01358_ch_G0000049;Parent=HG01358_ch_T0000177;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG01358_ch_T0000177:1;Name=LOC107987353;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6038791	6038959	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG01358_ch_T0000177;gene_id=HG01358_ch_G0000049;Parent=HG01358_ch_T0000177;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG01358_ch_T0000177:2;Name=LOC107987353;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6059440	6080603	.	+	.	source_gene_common_name=TTTY1B;source_gene=hg002_chrY_paternal_249;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;gene_id=HG01358_ch_G0000050;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG01358_ch_G0000050;Name=TTTY1B
HG01358_chrY	CAT	transcript	6059440	6080603	1000	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_G0000050;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=HG01358_ch_T0000178;Name=TTTY1B
HG01358_chrY	CAT	exon	6059440	6059714	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01358_ch_T0000178:0;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6059715	6063138	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG01358_ch_T0000178:0;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6063139	6063298	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01358_ch_T0000178:1;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6063299	6070161	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG01358_ch_T0000178:1;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6070162	6070270	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01358_ch_T0000178:2;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6070271	6072626	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG01358_ch_T0000178:2;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6072627	6072764	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01358_ch_T0000178:3;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6072765	6080345	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG01358_ch_T0000178:3;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6080346	6080603	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01358_ch_T0000178;gene_id=HG01358_ch_G0000050;Parent=HG01358_ch_T0000178;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01358_ch_T0000178:4;Name=TTTY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6075283	6097484	.	-	.	source_gene_common_name=TTTY2;source_gene=hg002_chrY_paternal_248;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;gene_id=HG01358_ch_G0000051;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG01358_ch_G0000051;Name=TTTY2
HG01358_chrY	CAT	transcript	6075283	6097484	1000	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_G0000051;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=HG01358_ch_T0000179;Name=TTTY2
HG01358_chrY	CAT	exon	6075283	6075962	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01358_ch_T0000179:0;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6075963	6077185	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01358_ch_T0000179:0;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6077186	6077383	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01358_ch_T0000179:1;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6077384	6077503	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01358_ch_T0000179:1;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6077504	6077582	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01358_ch_T0000179:2;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6077583	6080412	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01358_ch_T0000179:2;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6080413	6080569	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01358_ch_T0000179:3;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6080570	6081261	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01358_ch_T0000179:3;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6081262	6081410	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01358_ch_T0000179:4;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6081411	6088804	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01358_ch_T0000179:4;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6088805	6088891	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01358_ch_T0000179:5;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6088892	6091367	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01358_ch_T0000179:5;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6091368	6091445	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01358_ch_T0000179:6;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6091446	6097279	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01358_ch_T0000179:6;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6097280	6097484	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01358_ch_T0000179;gene_id=HG01358_ch_G0000051;Parent=HG01358_ch_T0000179;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01358_ch_T0000179:7;Name=TTTY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6112474	6116117	.	+	.	source_gene_common_name=TTTY21;source_gene=hg002_chrY_paternal_247;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;gene_id=HG01358_ch_G0000052;gene_biotype=lncRNA;gene_name=TTTY21;gene_sources=liftoff;ID=HG01358_ch_G0000052;Name=TTTY21
HG01358_chrY	CAT	transcript	6112474	6116117	1000	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG01358_ch_T0000180;gene_id=HG01358_ch_G0000052;Parent=HG01358_ch_G0000052;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=HG01358_ch_T0000180;Name=TTTY21
HG01358_chrY	CAT	exon	6112474	6112675	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG01358_ch_T0000180;gene_id=HG01358_ch_G0000052;Parent=HG01358_ch_T0000180;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG01358_ch_T0000180:0;Name=TTTY21;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6112676	6116012	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG01358_ch_T0000180;gene_id=HG01358_ch_G0000052;Parent=HG01358_ch_T0000180;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=intron:HG01358_ch_T0000180:0;Name=TTTY21;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6116013	6116117	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG01358_ch_T0000180;gene_id=HG01358_ch_G0000052;Parent=HG01358_ch_T0000180;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG01358_ch_T0000180:1;Name=TTTY21;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6118508	6126946	.	+	.	source_gene_common_name=TTTY7;source_gene=hg002_chrY_paternal_83;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;gene_id=HG01358_ch_G0000053;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG01358_ch_G0000053;Name=TTTY7
HG01358_chrY	CAT	transcript	6118508	6126946	1000	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_G0000053;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=HG01358_ch_T0000181;Name=TTTY7
HG01358_chrY	CAT	exon	6118508	6118544	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01358_ch_T0000181:0;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6118545	6119485	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01358_ch_T0000181:0;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6119486	6119647	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01358_ch_T0000181:1;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6119648	6121954	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01358_ch_T0000181:1;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6121955	6122029	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01358_ch_T0000181:2;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6122030	6122717	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01358_ch_T0000181:2;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6122718	6123194	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01358_ch_T0000181:3;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6123195	6125111	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01358_ch_T0000181:3;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6125112	6125225	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01358_ch_T0000181:4;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6125226	6126198	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01358_ch_T0000181:4;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6126199	6126454	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01358_ch_T0000181:5;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6126455	6126700	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01358_ch_T0000181:5;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6126701	6126946	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01358_ch_T0000181;gene_id=HG01358_ch_G0000053;Parent=HG01358_ch_T0000181;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01358_ch_T0000181:6;Name=TTTY7;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6140071	6142670	.	-	.	source_gene_common_name=TTTY8B;source_gene=hg002_chrY_paternal_84;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;gene_id=HG01358_ch_G0000054;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG01358_ch_G0000054;Name=TTTY8B
HG01358_chrY	CAT	transcript	6140071	6142670	1000	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01358_ch_T0000182;gene_id=HG01358_ch_G0000054;Parent=HG01358_ch_G0000054;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=HG01358_ch_T0000182;Name=TTTY8B
HG01358_chrY	CAT	exon	6140071	6140260	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01358_ch_T0000182;gene_id=HG01358_ch_G0000054;Parent=HG01358_ch_T0000182;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG01358_ch_T0000182:0;Name=TTTY8B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6140261	6141852	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01358_ch_T0000182;gene_id=HG01358_ch_G0000054;Parent=HG01358_ch_T0000182;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG01358_ch_T0000182:0;Name=TTTY8B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6141853	6142057	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01358_ch_T0000182;gene_id=HG01358_ch_G0000054;Parent=HG01358_ch_T0000182;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG01358_ch_T0000182:1;Name=TTTY8B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6142058	6142534	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01358_ch_T0000182;gene_id=HG01358_ch_G0000054;Parent=HG01358_ch_T0000182;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG01358_ch_T0000182:1;Name=TTTY8B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6142535	6142670	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01358_ch_T0000182;gene_id=HG01358_ch_G0000054;Parent=HG01358_ch_T0000182;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG01358_ch_T0000182:2;Name=TTTY8B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6534972	6580806	.	-	.	source_gene_common_name=AMELY;source_gene=hg002_chrY_paternal_88;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;gene_id=HG01358_ch_G0000055;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000055;Name=AMELY
HG01358_chrY	CAT	transcript	6534972	6543081	100	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_G0000055;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG01358_ch_T0000183;Name=AMELY
HG01358_chrY	CAT	exon	6534972	6535132	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000183:0;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6535127	6535132	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000183:0;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6535127	6535129	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG01358_ch_T0000183;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6535133	6537090	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000183:0;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6537091	6537516	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000183:1;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6537091	6537516	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000183:1;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6537517	6537785	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000183:1;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6537786	6537830	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000183:2;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6537786	6537830	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000183:2;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6537831	6537921	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000183:2;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6537922	6537963	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000183:3;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6537922	6537963	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000183:3;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6537964	6539059	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000183:3;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6539060	6539107	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000183:4;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6539060	6539107	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000183:4;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6539108	6541608	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000183:4;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6541609	6541674	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000183:5;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6541609	6541662	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000183:5;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6541660	6541662	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG01358_ch_T0000183;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6541675	6543025	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000183:5;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6543026	6543081	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000183;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000183;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000183:6;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6534972	6580806	100	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_G0000055;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG01358_ch_T0000184;Name=AMELY
HG01358_chrY	CAT	exon	6534972	6535132	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000184:0;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6535127	6535132	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000184:0;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6535127	6535129	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG01358_ch_T0000184;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6535133	6537090	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000184:0;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6537091	6537516	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000184:1;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6537091	6537516	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000184:1;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6537517	6537785	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000184:1;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6537786	6537830	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000184:2;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6537786	6537830	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000184:2;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6537831	6539059	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000184:2;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6539060	6539107	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000184:3;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6539060	6539107	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000184:3;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6539108	6541608	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000184:3;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6541609	6541674	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000184:4;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6541609	6541662	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01358_ch_T0000184:4;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6541660	6541662	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG01358_ch_T0000184;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6541675	6543025	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000184:4;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6543026	6543125	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000184:5;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6543126	6580726	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01358_ch_T0000184:5;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6580727	6580806	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000184;gene_id=HG01358_ch_G0000055;Parent=HG01358_ch_T0000184;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01358_ch_T0000184:6;Name=AMELY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6578919	6774736	.	+	.	source_gene_common_name=TBL1Y;source_gene=hg002_chrY_paternal_90;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;gene_id=HG01358_ch_G0000056;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000056;Name=TBL1Y
HG01358_chrY	CAT	transcript	6578919	6774736	100	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000185;Name=TBL1Y
HG01358_chrY	CAT	exon	6578919	6579157	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6579158	6581141	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6581142	6581226	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6581227	6647265	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6647266	6647296	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6647297	6664852	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6664853	6664947	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6664948	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000185;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6769832	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000185:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6769833	6774736	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000185:18;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6769833	6770018	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000185:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6770016	6770018	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000185;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000185;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6774736	100	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000186;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6581141	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6581142	6581226	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6581227	6647265	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6647266	6647296	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6647297	6664852	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6664853	6664947	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6664948	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000186;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6769832	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000186:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6769833	6774736	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000186:18;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6769833	6770018	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000186:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6770016	6770018	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000186;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000186;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6774736	100	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000187;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6581141	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6581142	6581226	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6581227	6647265	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6647266	6647296	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6647297	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000187;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6769832	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000187:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6769833	6774736	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000187:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6769833	6770018	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000187:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6770016	6770018	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000187;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000187;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6760731	100	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000188;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6581141	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6581142	6581226	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6581227	6647265	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6647266	6647296	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6647297	6664852	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6664853	6664947	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6664948	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000188;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6760519	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000188:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6760520	6760731	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000188:18;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6760520	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6760538	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000188;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000188;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6760731	100	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000189;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6581141	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6581142	6581226	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6581227	6664852	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6664853	6664947	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6664948	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000189;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6760519	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000189:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6760520	6760731	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000189:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6760520	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6760538	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000189;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000189;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6760731	100	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000190;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6581141	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6581142	6581226	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6581227	6647265	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6647266	6647296	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6647297	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000190;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6760519	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000190:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6760520	6760731	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000190:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6760520	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6760538	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000190;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000190;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6760731	100	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000191;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000191;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6760519	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6760520	6760731	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000191:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6760520	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6760538	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000191;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000191;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6774736	100	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000192;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000192;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6769832	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000192:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6769833	6774736	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000192:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6769833	6770018	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6770016	6770018	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000192;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000192;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6774736	100	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000193;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6581141	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6581142	6581226	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6581227	6647265	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6647266	6647296	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6647297	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000193;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6769832	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6769833	6769898	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6769833	6769898	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6769899	6774445	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000193:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6774446	6774736	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000193:18;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6774446	6774454	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000193:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6774452	6774454	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000193;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000193;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6774736	100	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000194;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6581141	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6581142	6581226	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6581227	6647265	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6647266	6647296	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6647297	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756334	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000194:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756335	6774736	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000194:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756335	6756440	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6756438	6756440	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000194;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6579751	6774736	100	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000195;Name=TBL1Y
HG01358_chrY	CAT	exon	6579751	6580036	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6580037	6690497	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6690498	6690586	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6690587	6694083	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6694084	6694191	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6694134	6694191	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6694134	6694136	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000195;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6694192	6712027	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6712028	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6712028	6712173	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756334	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756335	6774736	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756335	6756440	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6756438	6756440	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000195;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000195;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	6711659	6760731	100	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_G0000056;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01358_ch_T0000196;Name=TBL1Y
HG01358_chrY	CAT	exon	6711659	6712173	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6711928	6712173	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	6711928	6711930	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01358_ch_T0000196;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6712174	6732944	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6732945	6733197	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6732945	6733197	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6733198	6739243	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739244	6739376	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739244	6739376	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739377	6739767	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6739768	6739909	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6739768	6739909	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6739910	6740607	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740608	6740671	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740608	6740671	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740672	6740780	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6740781	6740878	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6740781	6740878	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6740879	6743607	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6743608	6743668	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6743608	6743668	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6743669	6749779	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6749780	6749901	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6749780	6749901	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6749902	6754945	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6754946	6755020	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6754946	6755020	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755021	6755337	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6755338	6755465	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6755338	6755465	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6755466	6756314	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6756315	6756480	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6756315	6756480	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6756481	6759136	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6759137	6759238	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6759137	6759238	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6759239	6760519	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01358_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6760520	6760731	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01358_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	6760520	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01358_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	6760538	6760540	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000196;gene_id=HG01358_ch_G0000056;Parent=HG01358_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01358_ch_T0000196;Name=TBL1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	6943017	7050592	.	+	.	source_gene_common_name=PRKY;source_gene=hg002_chrY_paternal_93;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;gene_id=HG01358_ch_G0000057;gene_biotype=transcribed_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG01358_ch_G0000057;Name=PRKY
HG01358_chrY	CAT	transcript	6943017	7050592	1000	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_G0000057;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=HG01358_ch_T0000197;Name=PRKY
HG01358_chrY	CAT	exon	6943017	6943523	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01358_ch_T0000197:0;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6943524	6972981	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01358_ch_T0000197:0;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6972982	6973150	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01358_ch_T0000197:1;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6973151	6994950	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01358_ch_T0000197:1;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	6994951	6995214	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01358_ch_T0000197:2;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	6995215	7010158	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01358_ch_T0000197:2;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7010159	7010278	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01358_ch_T0000197:3;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7010279	7025178	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01358_ch_T0000197:3;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7025179	7025274	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01358_ch_T0000197:4;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7025275	7036399	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01358_ch_T0000197:4;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7036400	7036477	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01358_ch_T0000197:5;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7036478	7040787	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01358_ch_T0000197:5;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7040788	7040934	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01358_ch_T0000197:6;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7040935	7044756	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01358_ch_T0000197:6;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7044757	7050592	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01358_ch_T0000197;gene_id=HG01358_ch_G0000057;Parent=HG01358_ch_T0000197;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01358_ch_T0000197:7;Name=PRKY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	7127655	7189629	.	+	.	source_gene_common_name=LOC107987338;source_gene=hg002_chrY_paternal_97;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;gene_id=HG01358_ch_G0000058;gene_biotype=lncRNA;gene_name=LOC107987338;gene_sources=liftoff;ID=HG01358_ch_G0000058;Name=LOC107987338
HG01358_chrY	CAT	transcript	7127655	7189629	1000	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01358_ch_T0000198;gene_id=HG01358_ch_G0000058;Parent=HG01358_ch_G0000058;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=HG01358_ch_T0000198;Name=LOC107987338
HG01358_chrY	CAT	exon	7127655	7127768	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01358_ch_T0000198;gene_id=HG01358_ch_G0000058;Parent=HG01358_ch_T0000198;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG01358_ch_T0000198:0;Name=LOC107987338;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7127769	7170045	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01358_ch_T0000198;gene_id=HG01358_ch_G0000058;Parent=HG01358_ch_T0000198;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG01358_ch_T0000198:0;Name=LOC107987338;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7170046	7170204	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01358_ch_T0000198;gene_id=HG01358_ch_G0000058;Parent=HG01358_ch_T0000198;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG01358_ch_T0000198:1;Name=LOC107987338;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7170205	7187976	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01358_ch_T0000198;gene_id=HG01358_ch_G0000058;Parent=HG01358_ch_T0000198;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG01358_ch_T0000198:1;Name=LOC107987338;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7187977	7188085	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01358_ch_T0000198;gene_id=HG01358_ch_G0000058;Parent=HG01358_ch_T0000198;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG01358_ch_T0000198:2;Name=LOC107987338;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7188086	7189117	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01358_ch_T0000198;gene_id=HG01358_ch_G0000058;Parent=HG01358_ch_T0000198;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG01358_ch_T0000198:2;Name=LOC107987338;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7189118	7189629	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01358_ch_T0000198;gene_id=HG01358_ch_G0000058;Parent=HG01358_ch_T0000198;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG01358_ch_T0000198:3;Name=LOC107987338;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	7368905	7370795	.	-	.	source_gene_common_name=TTTY16;source_gene=hg002_chrY_paternal_101;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;gene_id=HG01358_ch_G0000059;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG01358_ch_G0000059;Name=TTTY16
HG01358_chrY	CAT	transcript	7368905	7370795	1000	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG01358_ch_T0000199;gene_id=HG01358_ch_G0000059;Parent=HG01358_ch_G0000059;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=HG01358_ch_T0000199;Name=TTTY16
HG01358_chrY	CAT	exon	7368905	7369035	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG01358_ch_T0000199;gene_id=HG01358_ch_G0000059;Parent=HG01358_ch_T0000199;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG01358_ch_T0000199:0;Name=TTTY16;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7369036	7370734	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG01358_ch_T0000199;gene_id=HG01358_ch_G0000059;Parent=HG01358_ch_T0000199;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=intron:HG01358_ch_T0000199:0;Name=TTTY16;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7370735	7370795	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG01358_ch_T0000199;gene_id=HG01358_ch_G0000059;Parent=HG01358_ch_T0000199;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG01358_ch_T0000199:1;Name=TTTY16;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	7449011	7479414	.	-	.	source_gene_common_name=LOC107987339;source_gene=hg002_chrY_paternal_103;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;gene_id=HG01358_ch_G0000060;gene_biotype=lncRNA;gene_name=LOC107987339;gene_sources=liftoff;ID=HG01358_ch_G0000060;Name=LOC107987339
HG01358_chrY	CAT	transcript	7449011	7479414	1000	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01358_ch_T0000200;gene_id=HG01358_ch_G0000060;Parent=HG01358_ch_G0000060;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=HG01358_ch_T0000200;Name=LOC107987339
HG01358_chrY	CAT	exon	7449011	7449058	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01358_ch_T0000200;gene_id=HG01358_ch_G0000060;Parent=HG01358_ch_T0000200;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG01358_ch_T0000200:0;Name=LOC107987339;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7449059	7475038	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01358_ch_T0000200;gene_id=HG01358_ch_G0000060;Parent=HG01358_ch_T0000200;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG01358_ch_T0000200:0;Name=LOC107987339;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7475039	7475148	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01358_ch_T0000200;gene_id=HG01358_ch_G0000060;Parent=HG01358_ch_T0000200;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG01358_ch_T0000200:1;Name=LOC107987339;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7475149	7478697	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01358_ch_T0000200;gene_id=HG01358_ch_G0000060;Parent=HG01358_ch_T0000200;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG01358_ch_T0000200:1;Name=LOC107987339;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7478698	7479414	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01358_ch_T0000200;gene_id=HG01358_ch_G0000060;Parent=HG01358_ch_T0000200;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG01358_ch_T0000200:2;Name=LOC107987339;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	7473559	7480227	.	+	.	source_gene_common_name=TTTY12;source_gene=hg002_chrY_paternal_104;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;gene_id=HG01358_ch_G0000061;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG01358_ch_G0000061;Name=TTTY12
HG01358_chrY	CAT	transcript	7473559	7480227	1000	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01358_ch_T0000201;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_G0000061;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG01358_ch_T0000201;Name=TTTY12
HG01358_chrY	CAT	exon	7473559	7473606	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01358_ch_T0000201;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000201;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01358_ch_T0000201:0;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7473607	7474467	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01358_ch_T0000201;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000201;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01358_ch_T0000201:0;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7474468	7474623	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01358_ch_T0000201;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000201;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01358_ch_T0000201:1;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7474624	7479404	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01358_ch_T0000201;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000201;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01358_ch_T0000201:1;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7479405	7480227	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01358_ch_T0000201;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000201;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01358_ch_T0000201:2;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	7473559	7480227	1000	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01358_ch_T0000202;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_G0000061;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG01358_ch_T0000202;Name=TTTY12
HG01358_chrY	CAT	exon	7473559	7473606	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01358_ch_T0000202;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000202;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01358_ch_T0000202:0;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7473607	7474467	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01358_ch_T0000202;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000202;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01358_ch_T0000202:0;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7474468	7474623	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01358_ch_T0000202;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000202;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01358_ch_T0000202:1;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7474624	7475087	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01358_ch_T0000202;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000202;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01358_ch_T0000202:1;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7475088	7475169	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01358_ch_T0000202;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000202;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01358_ch_T0000202:2;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7475170	7479404	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01358_ch_T0000202;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000202;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01358_ch_T0000202:2;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7479405	7480227	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01358_ch_T0000202;gene_id=HG01358_ch_G0000061;Parent=HG01358_ch_T0000202;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01358_ch_T0000202:3;Name=TTTY12;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	7500359	7528315	.	-	.	source_gene_common_name=LOC105377229;source_gene=hg002_chrY_paternal_105;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;gene_id=HG01358_ch_G0000062;gene_biotype=lncRNA;gene_name=LOC105377229;gene_sources=liftoff;ID=HG01358_ch_G0000062;Name=LOC105377229
HG01358_chrY	CAT	transcript	7500359	7528315	1000	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01358_ch_T0000203;gene_id=HG01358_ch_G0000062;Parent=HG01358_ch_G0000062;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=HG01358_ch_T0000203;Name=LOC105377229
HG01358_chrY	CAT	exon	7500359	7501634	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01358_ch_T0000203;gene_id=HG01358_ch_G0000062;Parent=HG01358_ch_T0000203;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG01358_ch_T0000203:0;Name=LOC105377229;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7501635	7501781	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01358_ch_T0000203;gene_id=HG01358_ch_G0000062;Parent=HG01358_ch_T0000203;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG01358_ch_T0000203:0;Name=LOC105377229;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7501782	7501953	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01358_ch_T0000203;gene_id=HG01358_ch_G0000062;Parent=HG01358_ch_T0000203;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG01358_ch_T0000203:1;Name=LOC105377229;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7501954	7502521	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01358_ch_T0000203;gene_id=HG01358_ch_G0000062;Parent=HG01358_ch_T0000203;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG01358_ch_T0000203:1;Name=LOC105377229;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7502522	7502646	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01358_ch_T0000203;gene_id=HG01358_ch_G0000062;Parent=HG01358_ch_T0000203;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG01358_ch_T0000203:2;Name=LOC105377229;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	7502647	7528246	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01358_ch_T0000203;gene_id=HG01358_ch_G0000062;Parent=HG01358_ch_T0000203;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG01358_ch_T0000203:2;Name=LOC105377229;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	7528247	7528315	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01358_ch_T0000203;gene_id=HG01358_ch_G0000062;Parent=HG01358_ch_T0000203;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG01358_ch_T0000203:3;Name=LOC105377229;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8064598	8076865	.	+	.	source_gene_common_name=LOC105377231;source_gene=hg002_chrY_paternal_124;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;gene_id=HG01358_ch_G0000063;gene_biotype=lncRNA;gene_name=LOC105377231;gene_sources=liftoff;ID=HG01358_ch_G0000063;Name=LOC105377231
HG01358_chrY	CAT	transcript	8064598	8076865	1000	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01358_ch_T0000204;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_G0000063;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG01358_ch_T0000204;Name=LOC105377231
HG01358_chrY	CAT	exon	8064598	8064683	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01358_ch_T0000204;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000204;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01358_ch_T0000204:0;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8064684	8072277	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01358_ch_T0000204;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000204;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01358_ch_T0000204:0;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8072278	8072531	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01358_ch_T0000204;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000204;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01358_ch_T0000204:1;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8072532	8073232	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01358_ch_T0000204;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000204;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01358_ch_T0000204:1;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8073233	8073385	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01358_ch_T0000204;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000204;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01358_ch_T0000204:2;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8073386	8076677	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01358_ch_T0000204;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000204;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01358_ch_T0000204:2;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8076678	8076865	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01358_ch_T0000204;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000204;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01358_ch_T0000204:3;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8064598	8076865	1000	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01358_ch_T0000205;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_G0000063;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG01358_ch_T0000205;Name=LOC105377231
HG01358_chrY	CAT	exon	8064598	8064683	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01358_ch_T0000205;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000205;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01358_ch_T0000205:0;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8064684	8072277	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01358_ch_T0000205;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000205;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01358_ch_T0000205:0;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8072278	8072521	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01358_ch_T0000205;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000205;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01358_ch_T0000205:1;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8072522	8073232	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01358_ch_T0000205;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000205;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01358_ch_T0000205:1;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8073233	8073385	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01358_ch_T0000205;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000205;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01358_ch_T0000205:2;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8073386	8076677	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01358_ch_T0000205;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000205;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01358_ch_T0000205:2;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8076678	8076865	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01358_ch_T0000205;gene_id=HG01358_ch_G0000063;Parent=HG01358_ch_T0000205;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01358_ch_T0000205:3;Name=LOC105377231;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8218601	8220812	.	-	.	source_gene_common_name=LOC105377232;source_gene=hg002_chrY_paternal_128;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;gene_id=HG01358_ch_G0000064;gene_biotype=lncRNA;gene_name=LOC105377232;gene_sources=liftoff;ID=HG01358_ch_G0000064;Name=LOC105377232
HG01358_chrY	CAT	transcript	8218601	8220812	1000	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01358_ch_T0000206;gene_id=HG01358_ch_G0000064;Parent=HG01358_ch_G0000064;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=HG01358_ch_T0000206;Name=LOC105377232
HG01358_chrY	CAT	exon	8218601	8218615	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01358_ch_T0000206;gene_id=HG01358_ch_G0000064;Parent=HG01358_ch_T0000206;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG01358_ch_T0000206:0;Name=LOC105377232;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8218616	8219301	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01358_ch_T0000206;gene_id=HG01358_ch_G0000064;Parent=HG01358_ch_T0000206;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG01358_ch_T0000206:0;Name=LOC105377232;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8219302	8219376	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01358_ch_T0000206;gene_id=HG01358_ch_G0000064;Parent=HG01358_ch_T0000206;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG01358_ch_T0000206:1;Name=LOC105377232;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8219377	8220798	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01358_ch_T0000206;gene_id=HG01358_ch_G0000064;Parent=HG01358_ch_T0000206;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG01358_ch_T0000206:1;Name=LOC105377232;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8220799	8220812	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01358_ch_T0000206;gene_id=HG01358_ch_G0000064;Parent=HG01358_ch_T0000206;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG01358_ch_T0000206:2;Name=LOC105377232;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8230285	8231772	.	-	.	source_gene_common_name=LOC107987354;source_gene=hg002_chrY_paternal_129;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;gene_id=HG01358_ch_G0000065;gene_biotype=lncRNA;gene_name=LOC107987354;gene_sources=liftoff;ID=HG01358_ch_G0000065;Name=LOC107987354
HG01358_chrY	CAT	transcript	8230285	8231772	1000	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01358_ch_T0000207;gene_id=HG01358_ch_G0000065;Parent=HG01358_ch_G0000065;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=HG01358_ch_T0000207;Name=LOC107987354
HG01358_chrY	CAT	exon	8230285	8230443	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01358_ch_T0000207;gene_id=HG01358_ch_G0000065;Parent=HG01358_ch_T0000207;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG01358_ch_T0000207:0;Name=LOC107987354;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8230444	8230595	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01358_ch_T0000207;gene_id=HG01358_ch_G0000065;Parent=HG01358_ch_T0000207;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG01358_ch_T0000207:0;Name=LOC107987354;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8230596	8230670	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01358_ch_T0000207;gene_id=HG01358_ch_G0000065;Parent=HG01358_ch_T0000207;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG01358_ch_T0000207:1;Name=LOC107987354;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8230671	8231634	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01358_ch_T0000207;gene_id=HG01358_ch_G0000065;Parent=HG01358_ch_T0000207;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG01358_ch_T0000207:1;Name=LOC107987354;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8231635	8231772	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01358_ch_T0000207;gene_id=HG01358_ch_G0000065;Parent=HG01358_ch_T0000207;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG01358_ch_T0000207:2;Name=LOC107987354;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8307902	8314737	.	+	.	source_gene_common_name=LINC00279;source_gene=hg002_chrY_paternal_130;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;gene_id=HG01358_ch_G0000066;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG01358_ch_G0000066;Name=LINC00279
HG01358_chrY	CAT	transcript	8307902	8314737	1000	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01358_ch_T0000208;gene_id=HG01358_ch_G0000066;Parent=HG01358_ch_G0000066;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=HG01358_ch_T0000208;Name=LINC00279
HG01358_chrY	CAT	exon	8307902	8308014	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01358_ch_T0000208;gene_id=HG01358_ch_G0000066;Parent=HG01358_ch_T0000208;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG01358_ch_T0000208:0;Name=LINC00279;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8308015	8313739	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01358_ch_T0000208;gene_id=HG01358_ch_G0000066;Parent=HG01358_ch_T0000208;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG01358_ch_T0000208:0;Name=LINC00279;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8313740	8313935	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01358_ch_T0000208;gene_id=HG01358_ch_G0000066;Parent=HG01358_ch_T0000208;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG01358_ch_T0000208:1;Name=LINC00279;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8313936	8314286	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01358_ch_T0000208;gene_id=HG01358_ch_G0000066;Parent=HG01358_ch_T0000208;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG01358_ch_T0000208:1;Name=LINC00279;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8314287	8314529	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01358_ch_T0000208;gene_id=HG01358_ch_G0000066;Parent=HG01358_ch_T0000208;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG01358_ch_T0000208:2;Name=LINC00279;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8314530	8314661	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01358_ch_T0000208;gene_id=HG01358_ch_G0000066;Parent=HG01358_ch_T0000208;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG01358_ch_T0000208:2;Name=LINC00279;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8314662	8314737	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01358_ch_T0000208;gene_id=HG01358_ch_G0000066;Parent=HG01358_ch_T0000208;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG01358_ch_T0000208:3;Name=LINC00279;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8329650	8330491	.	+	.	source_gene_common_name=LOC107987340;source_gene=hg002_chrY_paternal_131;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;gene_id=HG01358_ch_G0000067;gene_biotype=lncRNA;gene_name=LOC107987340;gene_sources=liftoff;ID=HG01358_ch_G0000067;Name=LOC107987340
HG01358_chrY	CAT	transcript	8329650	8330491	1000	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG01358_ch_T0000209;gene_id=HG01358_ch_G0000067;Parent=HG01358_ch_G0000067;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=HG01358_ch_T0000209;Name=LOC107987340
HG01358_chrY	CAT	exon	8329650	8329771	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG01358_ch_T0000209;gene_id=HG01358_ch_G0000067;Parent=HG01358_ch_T0000209;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG01358_ch_T0000209:0;Name=LOC107987340;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8329772	8330106	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG01358_ch_T0000209;gene_id=HG01358_ch_G0000067;Parent=HG01358_ch_T0000209;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=intron:HG01358_ch_T0000209:0;Name=LOC107987340;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8330107	8330491	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG01358_ch_T0000209;gene_id=HG01358_ch_G0000067;Parent=HG01358_ch_T0000209;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG01358_ch_T0000209:1;Name=LOC107987340;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8352978	8353486	.	-	.	source_gene_common_name=TTTY18;source_gene=hg002_chrY_paternal_132;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;gene_id=HG01358_ch_G0000068;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG01358_ch_G0000068;Name=TTTY18
HG01358_chrY	CAT	transcript	8352978	8353486	1000	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG01358_ch_T0000210;gene_id=HG01358_ch_G0000068;Parent=HG01358_ch_G0000068;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=HG01358_ch_T0000210;Name=TTTY18
HG01358_chrY	CAT	exon	8352978	8353040	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG01358_ch_T0000210;gene_id=HG01358_ch_G0000068;Parent=HG01358_ch_T0000210;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG01358_ch_T0000210:0;Name=TTTY18;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8353041	8353328	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG01358_ch_T0000210;gene_id=HG01358_ch_G0000068;Parent=HG01358_ch_T0000210;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=intron:HG01358_ch_T0000210:0;Name=TTTY18;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8353329	8353486	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG01358_ch_T0000210;gene_id=HG01358_ch_G0000068;Parent=HG01358_ch_T0000210;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG01358_ch_T0000210:1;Name=TTTY18;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8363491	8364912	.	-	.	source_gene_common_name=LOC105377234;source_gene=hg002_chrY_paternal_133;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;gene_id=HG01358_ch_G0000069;gene_biotype=lncRNA;gene_name=LOC105377234;gene_sources=liftoff;ID=HG01358_ch_G0000069;Name=LOC105377234
HG01358_chrY	CAT	transcript	8363491	8364912	1000	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01358_ch_T0000211;gene_id=HG01358_ch_G0000069;Parent=HG01358_ch_G0000069;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=HG01358_ch_T0000211;Name=LOC105377234
HG01358_chrY	CAT	exon	8363491	8363577	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01358_ch_T0000211;gene_id=HG01358_ch_G0000069;Parent=HG01358_ch_T0000211;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG01358_ch_T0000211:0;Name=LOC105377234;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8363578	8364061	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01358_ch_T0000211;gene_id=HG01358_ch_G0000069;Parent=HG01358_ch_T0000211;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG01358_ch_T0000211:0;Name=LOC105377234;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8364062	8364139	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01358_ch_T0000211;gene_id=HG01358_ch_G0000069;Parent=HG01358_ch_T0000211;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG01358_ch_T0000211:1;Name=LOC105377234;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8364140	8364720	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01358_ch_T0000211;gene_id=HG01358_ch_G0000069;Parent=HG01358_ch_T0000211;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG01358_ch_T0000211:1;Name=LOC105377234;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8364721	8364912	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01358_ch_T0000211;gene_id=HG01358_ch_G0000069;Parent=HG01358_ch_T0000211;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG01358_ch_T0000211:2;Name=LOC105377234;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8374087	8374898	.	+	.	source_gene_common_name=TTTY19;source_gene=hg002_chrY_paternal_134;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;gene_id=HG01358_ch_G0000070;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG01358_ch_G0000070;Name=TTTY19
HG01358_chrY	CAT	transcript	8374087	8374898	1000	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG01358_ch_T0000212;gene_id=HG01358_ch_G0000070;Parent=HG01358_ch_G0000070;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=HG01358_ch_T0000212;Name=TTTY19
HG01358_chrY	CAT	exon	8374087	8374174	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG01358_ch_T0000212;gene_id=HG01358_ch_G0000070;Parent=HG01358_ch_T0000212;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG01358_ch_T0000212:0;Name=TTTY19;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8374175	8374717	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG01358_ch_T0000212;gene_id=HG01358_ch_G0000070;Parent=HG01358_ch_T0000212;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=intron:HG01358_ch_T0000212:0;Name=TTTY19;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8374718	8374898	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG01358_ch_T0000212;gene_id=HG01358_ch_G0000070;Parent=HG01358_ch_T0000212;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG01358_ch_T0000212:1;Name=TTTY19;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8391413	8393898	.	-	.	source_gene_common_name=LOC105377235;source_gene=hg002_chrY_paternal_135;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;gene_id=HG01358_ch_G0000071;gene_biotype=lncRNA;gene_name=LOC105377235;gene_sources=liftoff;ID=HG01358_ch_G0000071;Name=LOC105377235
HG01358_chrY	CAT	transcript	8391413	8393898	1000	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01358_ch_T0000213;gene_id=HG01358_ch_G0000071;Parent=HG01358_ch_G0000071;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=HG01358_ch_T0000213;Name=LOC105377235
HG01358_chrY	CAT	exon	8391413	8391696	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01358_ch_T0000213;gene_id=HG01358_ch_G0000071;Parent=HG01358_ch_T0000213;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG01358_ch_T0000213:0;Name=LOC105377235;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8391697	8391793	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01358_ch_T0000213;gene_id=HG01358_ch_G0000071;Parent=HG01358_ch_T0000213;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG01358_ch_T0000213:0;Name=LOC105377235;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8391794	8391889	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01358_ch_T0000213;gene_id=HG01358_ch_G0000071;Parent=HG01358_ch_T0000213;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG01358_ch_T0000213:1;Name=LOC105377235;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8391890	8391979	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01358_ch_T0000213;gene_id=HG01358_ch_G0000071;Parent=HG01358_ch_T0000213;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG01358_ch_T0000213:1;Name=LOC105377235;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8391980	8392242	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01358_ch_T0000213;gene_id=HG01358_ch_G0000071;Parent=HG01358_ch_T0000213;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG01358_ch_T0000213:2;Name=LOC105377235;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8392243	8393710	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01358_ch_T0000213;gene_id=HG01358_ch_G0000071;Parent=HG01358_ch_T0000213;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG01358_ch_T0000213:2;Name=LOC105377235;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8393711	8393898	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01358_ch_T0000213;gene_id=HG01358_ch_G0000071;Parent=HG01358_ch_T0000213;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG01358_ch_T0000213:3;Name=LOC105377235;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8452929	8486998	.	-	.	source_gene_common_name=TTTY11;source_gene=hg002_chrY_paternal_136;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;gene_id=HG01358_ch_G0000072;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG01358_ch_G0000072;Name=TTTY11
HG01358_chrY	CAT	transcript	8452929	8486998	1000	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_G0000072;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=HG01358_ch_T0000214;Name=TTTY11
HG01358_chrY	CAT	exon	8452929	8453022	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01358_ch_T0000214:0;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8453023	8453503	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG01358_ch_T0000214:0;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8453504	8453819	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01358_ch_T0000214:1;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8453820	8458615	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG01358_ch_T0000214:1;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8458616	8458918	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01358_ch_T0000214:2;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8458919	8464476	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG01358_ch_T0000214:2;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8464477	8464560	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01358_ch_T0000214:3;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8464561	8486961	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG01358_ch_T0000214:3;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8486962	8486998	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01358_ch_T0000214;gene_id=HG01358_ch_G0000072;Parent=HG01358_ch_T0000214;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01358_ch_T0000214:4;Name=TTTY11;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8884554	8889418	.	+	.	source_gene_common_name=LOC105379264;source_gene=hg002_chrY_paternal_145;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;gene_id=HG01358_ch_G0000073;gene_biotype=lncRNA;gene_name=LOC105379264;gene_sources=liftoff;ID=HG01358_ch_G0000073;Name=LOC105379264
HG01358_chrY	CAT	transcript	8884554	8889418	1000	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01358_ch_T0000215;gene_id=HG01358_ch_G0000073;Parent=HG01358_ch_G0000073;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=HG01358_ch_T0000215;Name=LOC105379264
HG01358_chrY	CAT	exon	8884554	8884628	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01358_ch_T0000215;gene_id=HG01358_ch_G0000073;Parent=HG01358_ch_T0000215;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG01358_ch_T0000215:0;Name=LOC105379264;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8884629	8884782	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01358_ch_T0000215;gene_id=HG01358_ch_G0000073;Parent=HG01358_ch_T0000215;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG01358_ch_T0000215:0;Name=LOC105379264;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8884783	8884887	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01358_ch_T0000215;gene_id=HG01358_ch_G0000073;Parent=HG01358_ch_T0000215;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG01358_ch_T0000215:1;Name=LOC105379264;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8884888	8886949	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01358_ch_T0000215;gene_id=HG01358_ch_G0000073;Parent=HG01358_ch_T0000215;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG01358_ch_T0000215:1;Name=LOC105379264;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8886950	8887025	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01358_ch_T0000215;gene_id=HG01358_ch_G0000073;Parent=HG01358_ch_T0000215;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG01358_ch_T0000215:2;Name=LOC105379264;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8887026	8889334	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01358_ch_T0000215;gene_id=HG01358_ch_G0000073;Parent=HG01358_ch_T0000215;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG01358_ch_T0000215:2;Name=LOC105379264;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8889335	8889418	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01358_ch_T0000215;gene_id=HG01358_ch_G0000073;Parent=HG01358_ch_T0000215;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG01358_ch_T0000215:3;Name=LOC105379264;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8894107	8902653	.	+	.	source_gene_common_name=LOC105379265;source_gene=hg002_chrY_paternal_146;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;gene_id=HG01358_ch_G0000074;gene_biotype=lncRNA;gene_name=LOC105379265;gene_sources=liftoff;ID=HG01358_ch_G0000074;Name=LOC105379265
HG01358_chrY	CAT	transcript	8894107	8902653	1000	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01358_ch_T0000216;gene_id=HG01358_ch_G0000074;Parent=HG01358_ch_G0000074;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=HG01358_ch_T0000216;Name=LOC105379265
HG01358_chrY	CAT	exon	8894107	8894662	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01358_ch_T0000216;gene_id=HG01358_ch_G0000074;Parent=HG01358_ch_T0000216;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG01358_ch_T0000216:0;Name=LOC105379265;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8894663	8895770	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01358_ch_T0000216;gene_id=HG01358_ch_G0000074;Parent=HG01358_ch_T0000216;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG01358_ch_T0000216:0;Name=LOC105379265;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8895771	8895912	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01358_ch_T0000216;gene_id=HG01358_ch_G0000074;Parent=HG01358_ch_T0000216;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG01358_ch_T0000216:1;Name=LOC105379265;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8895913	8898056	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01358_ch_T0000216;gene_id=HG01358_ch_G0000074;Parent=HG01358_ch_T0000216;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG01358_ch_T0000216:1;Name=LOC105379265;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8898057	8898143	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01358_ch_T0000216;gene_id=HG01358_ch_G0000074;Parent=HG01358_ch_T0000216;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG01358_ch_T0000216:2;Name=LOC105379265;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8898144	8902524	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01358_ch_T0000216;gene_id=HG01358_ch_G0000074;Parent=HG01358_ch_T0000216;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG01358_ch_T0000216:2;Name=LOC105379265;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8902525	8902653	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01358_ch_T0000216;gene_id=HG01358_ch_G0000074;Parent=HG01358_ch_T0000216;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG01358_ch_T0000216:3;Name=LOC105379265;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8908687	8910938	.	+	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_147;alternative_source_transcripts=hg002_chrY_paternal_147.1;gene_id=HG01358_ch_G0000075;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG01358_ch_G0000075;Name=LOC105379266
HG01358_chrY	CAT	transcript	8908687	8910938	1000	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000217;gene_id=HG01358_ch_G0000075;Parent=HG01358_ch_G0000075;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=HG01358_ch_T0000217;Name=LOC105379266
HG01358_chrY	CAT	exon	8908687	8908971	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000217;gene_id=HG01358_ch_G0000075;Parent=HG01358_ch_T0000217;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG01358_ch_T0000217:0;Name=LOC105379266;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8908972	8909656	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000217;gene_id=HG01358_ch_G0000075;Parent=HG01358_ch_T0000217;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=intron:HG01358_ch_T0000217:0;Name=LOC105379266;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8909657	8910938	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000217;gene_id=HG01358_ch_G0000075;Parent=HG01358_ch_T0000217;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG01358_ch_T0000217:1;Name=LOC105379266;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8912094	8924323	.	+	.	source_gene_common_name=LOC105379267;source_gene=hg002_chrY_paternal_148;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;gene_id=HG01358_ch_G0000076;gene_biotype=lncRNA;gene_name=LOC105379267;gene_sources=liftoff;ID=HG01358_ch_G0000076;Name=LOC105379267
HG01358_chrY	CAT	transcript	8912094	8924323	1000	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01358_ch_T0000218;gene_id=HG01358_ch_G0000076;Parent=HG01358_ch_G0000076;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=HG01358_ch_T0000218;Name=LOC105379267
HG01358_chrY	CAT	exon	8912094	8912265	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01358_ch_T0000218;gene_id=HG01358_ch_G0000076;Parent=HG01358_ch_T0000218;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG01358_ch_T0000218:0;Name=LOC105379267;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8912266	8913510	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01358_ch_T0000218;gene_id=HG01358_ch_G0000076;Parent=HG01358_ch_T0000218;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG01358_ch_T0000218:0;Name=LOC105379267;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8913511	8913585	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01358_ch_T0000218;gene_id=HG01358_ch_G0000076;Parent=HG01358_ch_T0000218;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG01358_ch_T0000218:1;Name=LOC105379267;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8913586	8924252	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01358_ch_T0000218;gene_id=HG01358_ch_G0000076;Parent=HG01358_ch_T0000218;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG01358_ch_T0000218:1;Name=LOC105379267;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8924253	8924323	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01358_ch_T0000218;gene_id=HG01358_ch_G0000076;Parent=HG01358_ch_T0000218;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG01358_ch_T0000218:2;Name=LOC105379267;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8936771	8942585	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=hg002_chrY_paternal_149;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;gene_id=HG01358_ch_G0000077;gene_biotype=transcribed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG01358_ch_G0000077;Name=RBMY1A3P
HG01358_chrY	CAT	transcript	8936771	8942585	1000	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01358_ch_T0000219;gene_id=HG01358_ch_G0000077;Parent=HG01358_ch_G0000077;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=HG01358_ch_T0000219;Name=RBMY1A3P
HG01358_chrY	CAT	exon	8936771	8936801	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01358_ch_T0000219;gene_id=HG01358_ch_G0000077;Parent=HG01358_ch_T0000219;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG01358_ch_T0000219:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8936802	8938701	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01358_ch_T0000219;gene_id=HG01358_ch_G0000077;Parent=HG01358_ch_T0000219;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG01358_ch_T0000219:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8938702	8938879	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01358_ch_T0000219;gene_id=HG01358_ch_G0000077;Parent=HG01358_ch_T0000219;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG01358_ch_T0000219:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8938880	8941895	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01358_ch_T0000219;gene_id=HG01358_ch_G0000077;Parent=HG01358_ch_T0000219;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG01358_ch_T0000219:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8941896	8941999	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01358_ch_T0000219;gene_id=HG01358_ch_G0000077;Parent=HG01358_ch_T0000219;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG01358_ch_T0000219:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8942000	8942471	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01358_ch_T0000219;gene_id=HG01358_ch_G0000077;Parent=HG01358_ch_T0000219;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG01358_ch_T0000219:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8942472	8942585	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01358_ch_T0000219;gene_id=HG01358_ch_G0000077;Parent=HG01358_ch_T0000219;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG01358_ch_T0000219:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8949591	8954543	.	-	.	source_gene_common_name=TTTY20;source_gene=hg002_chrY_paternal_151;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;gene_id=HG01358_ch_G0000078;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG01358_ch_G0000078;Name=TTTY20
HG01358_chrY	CAT	transcript	8949591	8954543	1000	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG01358_ch_T0000220;gene_id=HG01358_ch_G0000078;Parent=HG01358_ch_G0000078;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=HG01358_ch_T0000220;Name=TTTY20
HG01358_chrY	CAT	exon	8949591	8949767	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG01358_ch_T0000220;gene_id=HG01358_ch_G0000078;Parent=HG01358_ch_T0000220;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG01358_ch_T0000220:0;Name=TTTY20;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8949768	8954461	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG01358_ch_T0000220;gene_id=HG01358_ch_G0000078;Parent=HG01358_ch_T0000220;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=intron:HG01358_ch_T0000220:0;Name=TTTY20;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8954462	8954543	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG01358_ch_T0000220;gene_id=HG01358_ch_G0000078;Parent=HG01358_ch_T0000220;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG01358_ch_T0000220:1;Name=TTTY20;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8957175	8959971	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_152;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;gene_id=HG01358_ch_G0000079;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000079;Name=TSPY8
HG01358_chrY	CAT	transcript	8957175	8959971	100	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG01358_ch_T0000221;Name=TSPY8
HG01358_chrY	CAT	exon	8957175	8957706	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000221:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8957221	8957706	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000221:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8957221	8957223	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG01358_ch_T0000221;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8957707	8958313	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000221:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958314	8958391	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000221:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958314	8958391	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000221:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958392	8958519	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000221:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958520	8958631	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000221:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958520	8958631	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000221:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958632	8958732	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000221:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958733	8958878	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000221:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958733	8958878	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000221:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958879	8958984	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000221:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958985	8959066	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000221:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958985	8959066	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000221:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8959067	8959760	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000221:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8959761	8959971	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000221:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8959761	8959783	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000221:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	8959781	8959783	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000221;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000221;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG01358_ch_T0000221;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8957175	8959971	100	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG01358_ch_T0000222;Name=TSPY8
HG01358_chrY	CAT	exon	8957175	8957706	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000222:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8957221	8957706	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000222:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8957221	8957223	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG01358_ch_T0000222;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8957707	8958313	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000222:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958314	8958391	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000222:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958314	8958391	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000222:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958392	8958519	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000222:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958520	8958631	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000222:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958520	8958631	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000222:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958632	8958732	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000222:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958733	8958878	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000222:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958733	8958878	.	+	2	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000222:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958879	8958973	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000222:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958974	8959066	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000222:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958974	8959036	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000222:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	8959034	8959036	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG01358_ch_T0000222;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8959067	8959760	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000222:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8959761	8959971	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000222;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000222;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000222:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8957175	8959971	100	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG01358_ch_T0000223;Name=TSPY8
HG01358_chrY	CAT	exon	8957175	8957706	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000223:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8957221	8957706	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000223:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8957221	8957223	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG01358_ch_T0000223;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8957707	8958313	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000223:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958314	8958391	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000223:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958314	8958391	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000223:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958392	8958519	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000223:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958520	8958631	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000223:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958520	8958631	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000223:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958632	8958739	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000223:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958740	8958878	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000223:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958740	8958878	.	+	2	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000223:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958879	8958984	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000223:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958985	8959066	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000223:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8958985	8959036	.	+	1	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000223:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	8959034	8959036	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG01358_ch_T0000223;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8959067	8959760	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000223:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8959761	8959971	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000223;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000223;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000223:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8957175	8959971	1000	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_G0000079;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=HG01358_ch_T0000224;Name=TSPY8
HG01358_chrY	CAT	exon	8957175	8957706	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000224:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8957707	8958313	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000224:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958314	8958391	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000224:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958392	8958519	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000224:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958520	8958631	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000224:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958632	8958739	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000224:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958740	8958878	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000224:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8958879	8958973	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000224:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8958974	8959066	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000224:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8959067	8959760	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000224:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8959761	8959971	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000224;gene_id=HG01358_ch_G0000079;Parent=HG01358_ch_T0000224;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000224:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8969260	8974872	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_153;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;gene_id=HG01358_ch_G0000080;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000080;Name=FAM197Y3
HG01358_chrY	CAT	transcript	8969260	8974872	1000	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01358_ch_T0000225;gene_id=HG01358_ch_G0000080;Parent=HG01358_ch_G0000080;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000225;Name=FAM197Y3
HG01358_chrY	CAT	exon	8969260	8969319	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01358_ch_T0000225;gene_id=HG01358_ch_G0000080;Parent=HG01358_ch_T0000225;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000225:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8969320	8972869	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01358_ch_T0000225;gene_id=HG01358_ch_G0000080;Parent=HG01358_ch_T0000225;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000225:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8972870	8973028	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01358_ch_T0000225;gene_id=HG01358_ch_G0000080;Parent=HG01358_ch_T0000225;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000225:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8973029	8974538	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01358_ch_T0000225;gene_id=HG01358_ch_G0000080;Parent=HG01358_ch_T0000225;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000225:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8974539	8974684	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01358_ch_T0000225;gene_id=HG01358_ch_G0000080;Parent=HG01358_ch_T0000225;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000225:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8974685	8974770	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01358_ch_T0000225;gene_id=HG01358_ch_G0000080;Parent=HG01358_ch_T0000225;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000225:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8974771	8974872	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01358_ch_T0000225;gene_id=HG01358_ch_G0000080;Parent=HG01358_ch_T0000225;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000225:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8977487	8980283	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_154;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;gene_id=HG01358_ch_G0000081;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000081;Name=TSPY8
HG01358_chrY	CAT	transcript	8977487	8980283	100	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_G0000081;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG01358_ch_T0000226;Name=TSPY8
HG01358_chrY	CAT	exon	8977487	8978018	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8977533	8978018	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8977533	8977535	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG01358_ch_T0000226;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978019	8978625	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8978626	8978703	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8978626	8978703	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978704	8978831	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8978832	8978943	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8978832	8978943	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978944	8979044	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8979045	8979190	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8979045	8979190	.	+	2	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8979191	8979296	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8979297	8979378	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8979297	8979378	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8979379	8980072	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8980073	8980283	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000226:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8980073	8980095	.	+	2	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000226:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	8980093	8980095	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000226;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000226;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG01358_ch_T0000226;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8977487	8980283	100	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_G0000081;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG01358_ch_T0000227;Name=TSPY8
HG01358_chrY	CAT	exon	8977487	8978018	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000227:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8977533	8978018	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000227:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8977533	8977535	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG01358_ch_T0000227;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978019	8978625	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000227:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8978626	8978703	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000227:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8978626	8978703	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000227:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978704	8978831	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000227:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8978832	8978943	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000227:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8978832	8978943	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000227:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978944	8979044	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000227:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8979045	8979190	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000227:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8979045	8979190	.	+	2	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000227:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8979191	8979285	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000227:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8979286	8979378	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000227:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8979286	8979348	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000227:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	8979346	8979348	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG01358_ch_T0000227;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8979379	8980072	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000227:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8980073	8980283	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000227;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000227;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000227:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8977487	8980283	100	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_G0000081;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG01358_ch_T0000228;Name=TSPY8
HG01358_chrY	CAT	exon	8977487	8978018	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000228:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8977533	8978018	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000228:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8977533	8977535	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG01358_ch_T0000228;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978019	8978625	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000228:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8978626	8978703	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000228:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8978626	8978703	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000228:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978704	8978831	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000228:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8978832	8978943	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000228:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8978832	8978943	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000228:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978944	8979051	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000228:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8979052	8979190	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000228:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8979052	8979190	.	+	2	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000228:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8979191	8979296	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000228:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8979297	8979378	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000228:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8979297	8979348	.	+	1	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01358_ch_T0000228:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	8979346	8979348	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG01358_ch_T0000228;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8979379	8980072	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01358_ch_T0000228:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8980073	8980283	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000228;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000228;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01358_ch_T0000228:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8977487	8980283	1000	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_G0000081;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=HG01358_ch_T0000229;Name=TSPY8
HG01358_chrY	CAT	exon	8977487	8978018	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000229:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978019	8978625	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000229:0;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8978626	8978703	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000229:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978704	8978831	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000229:1;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8978832	8978943	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000229:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8978944	8979051	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000229:2;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8979052	8979190	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000229:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8979191	8979285	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000229:3;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8979286	8979378	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000229:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8979379	8980072	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01358_ch_T0000229:4;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8980073	8980283	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000229;gene_id=HG01358_ch_G0000081;Parent=HG01358_ch_T0000229;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01358_ch_T0000229:5;Name=TSPY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8989586	8995196	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_169;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;gene_id=HG01358_ch_G0000082;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000082;Name=FAM197Y3
HG01358_chrY	CAT	transcript	8989586	8995196	1000	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01358_ch_T0000230;gene_id=HG01358_ch_G0000082;Parent=HG01358_ch_G0000082;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000230;Name=FAM197Y3
HG01358_chrY	CAT	exon	8989586	8989645	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01358_ch_T0000230;gene_id=HG01358_ch_G0000082;Parent=HG01358_ch_T0000230;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000230:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8989646	8993195	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01358_ch_T0000230;gene_id=HG01358_ch_G0000082;Parent=HG01358_ch_T0000230;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000230:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8993196	8993354	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01358_ch_T0000230;gene_id=HG01358_ch_G0000082;Parent=HG01358_ch_T0000230;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000230:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8993355	8994862	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01358_ch_T0000230;gene_id=HG01358_ch_G0000082;Parent=HG01358_ch_T0000230;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000230:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8994863	8995008	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01358_ch_T0000230;gene_id=HG01358_ch_G0000082;Parent=HG01358_ch_T0000230;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000230:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8995009	8995094	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01358_ch_T0000230;gene_id=HG01358_ch_G0000082;Parent=HG01358_ch_T0000230;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000230:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8995095	8995196	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01358_ch_T0000230;gene_id=HG01358_ch_G0000082;Parent=HG01358_ch_T0000230;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000230:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	8997811	9000625	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_216;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;gene_id=HG01358_ch_G0000083;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01358_ch_G0000083;Name=TSPY4
HG01358_chrY	CAT	transcript	8997811	9000625	100	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_G0000083;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG01358_ch_T0000231;Name=TSPY4
HG01358_chrY	CAT	exon	8997811	8998360	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8997857	8998360	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8997857	8997859	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000231;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8998361	8998967	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8998968	8999045	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8998968	8999045	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999046	8999173	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999174	8999285	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999174	8999285	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999286	8999386	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999387	8999532	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999387	8999532	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999533	8999638	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999639	8999720	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999639	8999720	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999721	9000414	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9000415	9000625	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000231:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9000415	9000437	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000231:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9000435	9000437	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG01358_ch_T0000231;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000231;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000231;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8997811	9000625	100	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_G0000083;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG01358_ch_T0000232;Name=TSPY4
HG01358_chrY	CAT	exon	8997811	8998360	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000232:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8997857	8998360	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000232:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8997857	8997859	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000232;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8998361	8998967	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000232:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8998968	8999045	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000232:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8998968	8999045	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000232:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999046	8999173	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000232:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999174	8999285	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000232:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999174	8999285	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000232:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999286	8999386	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000232:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999387	8999532	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000232:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999387	8999532	.	+	2	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000232:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999533	8999627	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000232:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999628	8999720	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000232:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999628	8999690	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000232:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	8999688	8999690	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000232;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999721	9000414	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000232:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9000415	9000625	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG01358_ch_T0000232;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000232;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000232:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8997811	9000625	100	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_G0000083;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG01358_ch_T0000233;Name=TSPY4
HG01358_chrY	CAT	exon	8997811	8998360	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000233:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8997857	8998360	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000233:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	8997857	8997859	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000233;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8998361	8998967	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000233:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8998968	8999045	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000233:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8998968	8999045	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000233:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999046	8999173	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000233:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999174	8999285	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000233:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999174	8999285	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000233:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999286	8999393	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000233:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999394	8999532	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000233:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999394	8999532	.	+	2	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000233:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999533	8999638	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000233:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999639	8999720	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000233:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	8999639	8999690	.	+	1	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000233:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	8999688	8999690	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000233;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999721	9000414	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000233:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9000415	9000625	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG01358_ch_T0000233;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000233;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000233:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	8997811	9000625	1000	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_G0000083;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=HG01358_ch_T0000234;Name=TSPY4
HG01358_chrY	CAT	exon	8997811	8998360	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8998361	8998967	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8998968	8999045	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999046	8999173	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999174	8999285	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999286	8999393	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999394	8999532	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999533	8999627	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	8999628	8999720	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	8999721	9000414	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9000415	9000625	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG01358_ch_T0000234;gene_id=HG01358_ch_G0000083;Parent=HG01358_ch_T0000234;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000234:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9009893	9015578	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;gene_id=HG01358_ch_G0000084;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000084;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9009893	9015578	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG01358_ch_T0000235;gene_id=HG01358_ch_G0000084;Parent=HG01358_ch_G0000084;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000235;Name=FAM197Y2
HG01358_chrY	CAT	exon	9009893	9009952	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG01358_ch_T0000235;gene_id=HG01358_ch_G0000084;Parent=HG01358_ch_T0000235;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000235:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9009953	9013507	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG01358_ch_T0000235;gene_id=HG01358_ch_G0000084;Parent=HG01358_ch_T0000235;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000235:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9013508	9013666	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG01358_ch_T0000235;gene_id=HG01358_ch_G0000084;Parent=HG01358_ch_T0000235;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000235:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9013667	9015155	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG01358_ch_T0000235;gene_id=HG01358_ch_G0000084;Parent=HG01358_ch_T0000235;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000235:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9015156	9015301	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG01358_ch_T0000235;gene_id=HG01358_ch_G0000084;Parent=HG01358_ch_T0000235;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000235:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9015302	9015387	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG01358_ch_T0000235;gene_id=HG01358_ch_G0000084;Parent=HG01358_ch_T0000235;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000235:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9015388	9015578	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG01358_ch_T0000235;gene_id=HG01358_ch_G0000084;Parent=HG01358_ch_T0000235;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000235:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9018103	9020899	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;gene_id=HG01358_ch_G0000085;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000085;Name=TSPY1
HG01358_chrY	CAT	transcript	9018103	9020899	100	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_G0000085;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01358_ch_T0000236;Name=TSPY1
HG01358_chrY	CAT	exon	9018103	9018634	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000236:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9018149	9018634	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000236:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9018149	9018151	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000236;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9018635	9019241	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000236:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019242	9019319	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000236:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019242	9019319	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000236:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019320	9019447	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000236:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019448	9019559	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000236:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019448	9019559	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000236:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019560	9019660	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000236:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019661	9019806	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000236:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019661	9019806	.	+	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000236:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019807	9019901	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000236:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019902	9019994	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000236:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019902	9019964	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000236:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9019962	9019964	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000236;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019995	9020688	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000236:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9020689	9020899	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000236;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000236:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9018103	9020899	100	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_G0000085;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01358_ch_T0000237;Name=TSPY1
HG01358_chrY	CAT	exon	9018103	9018235	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000237:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9018149	9018235	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000237:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9018149	9018151	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000237;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9018236	9018496	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000237:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9018497	9018634	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000237:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9018497	9018634	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000237:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9018635	9019241	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000237:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019242	9019319	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000237:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019242	9019319	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000237:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019320	9019447	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000237:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019448	9019559	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000237:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019448	9019559	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000237:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019560	9019660	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000237:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019661	9019806	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000237:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019661	9019806	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000237:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019807	9019912	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000237:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019913	9019994	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000237:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019913	9019994	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000237:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019995	9020688	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000237:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9020689	9020899	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000237:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9020689	9020711	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000237:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9020709	9020711	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000237;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000237;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9018103	9020899	100	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_G0000085;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01358_ch_T0000238;Name=TSPY1
HG01358_chrY	CAT	exon	9018103	9018634	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000238:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9018149	9018634	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000238:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9018149	9018151	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000238;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9018635	9019241	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000238:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019242	9019319	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000238:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019242	9019319	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000238:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019320	9019447	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000238:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019448	9019559	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000238:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019448	9019559	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000238:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019560	9019660	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000238:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019661	9019806	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000238:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019661	9019806	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000238:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019807	9019912	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000238:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019913	9019994	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000238:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019913	9019994	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000238:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019995	9020688	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000238:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9020689	9020899	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000238:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9020689	9020711	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000238:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9020709	9020711	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000238;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000238;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000238;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9018103	9020899	100	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_G0000085;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01358_ch_T0000239;Name=TSPY1
HG01358_chrY	CAT	exon	9018103	9018634	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9018149	9018634	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9018149	9018151	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000239;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9018635	9019241	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019242	9019319	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019242	9019319	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019320	9019447	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019448	9019559	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019448	9019559	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019560	9019667	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019668	9019806	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019668	9019806	.	+	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019807	9019912	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019913	9019994	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9019913	9019964	.	+	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9019962	9019964	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000239;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019995	9020688	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9020689	9020899	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000239;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000239:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9018103	9020899	1000	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_G0000085;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=HG01358_ch_T0000240;Name=TSPY1
HG01358_chrY	CAT	exon	9018103	9018634	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000240:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9018635	9019241	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000240:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019242	9019319	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000240:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019320	9019447	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000240:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019448	9019559	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000240:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019560	9019667	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000240:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019668	9019806	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000240:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019807	9019901	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000240:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9019902	9019994	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000240:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9019995	9020688	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000240:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9020689	9020899	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000240;gene_id=HG01358_ch_G0000085;Parent=HG01358_ch_T0000240;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000240:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9030194	9035888	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_159;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;gene_id=HG01358_ch_G0000086;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000086;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9030194	9035888	1000	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01358_ch_T0000241;gene_id=HG01358_ch_G0000086;Parent=HG01358_ch_G0000086;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000241;Name=FAM197Y2
HG01358_chrY	CAT	exon	9030194	9030253	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01358_ch_T0000241;gene_id=HG01358_ch_G0000086;Parent=HG01358_ch_T0000241;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000241:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9030254	9033802	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01358_ch_T0000241;gene_id=HG01358_ch_G0000086;Parent=HG01358_ch_T0000241;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000241:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9033803	9033961	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01358_ch_T0000241;gene_id=HG01358_ch_G0000086;Parent=HG01358_ch_T0000241;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000241:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9033962	9035465	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01358_ch_T0000241;gene_id=HG01358_ch_G0000086;Parent=HG01358_ch_T0000241;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000241:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9035466	9035611	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01358_ch_T0000241;gene_id=HG01358_ch_G0000086;Parent=HG01358_ch_T0000241;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000241:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9035612	9035697	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01358_ch_T0000241;gene_id=HG01358_ch_G0000086;Parent=HG01358_ch_T0000241;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000241:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9035698	9035888	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01358_ch_T0000241;gene_id=HG01358_ch_G0000086;Parent=HG01358_ch_T0000241;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000241:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9038412	9041226	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_160;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;gene_id=HG01358_ch_G0000087;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000087;Name=TSPY4
HG01358_chrY	CAT	transcript	9038412	9041226	100	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_G0000087;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG01358_ch_T0000242;Name=TSPY4
HG01358_chrY	CAT	exon	9038412	9038961	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9038458	9038961	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9038458	9038460	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000242;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9038962	9039568	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039569	9039646	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039569	9039646	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9039647	9039774	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039775	9039886	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039775	9039886	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9039887	9039987	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039988	9040133	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039988	9040133	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9040134	9040239	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9040240	9040321	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9040240	9040321	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9040322	9041015	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9041016	9041226	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000242:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9041016	9041038	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000242:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9041036	9041038	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000242;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000242;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9038412	9041226	100	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_G0000087;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG01358_ch_T0000243;Name=TSPY4
HG01358_chrY	CAT	exon	9038412	9038961	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000243:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9038458	9038961	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000243:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9038458	9038460	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000243;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9038962	9039568	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000243:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039569	9039646	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000243:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039569	9039646	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000243:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9039647	9039774	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000243:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039775	9039886	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000243:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039775	9039886	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000243:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9039887	9039987	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000243:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039988	9040133	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000243:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039988	9040133	.	+	2	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000243:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9040134	9040228	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000243:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9040229	9040321	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000243:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9040229	9040291	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000243:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9040289	9040291	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000243;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9040322	9041015	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000243:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9041016	9041226	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000243;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000243;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000243:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9038412	9041226	100	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_G0000087;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG01358_ch_T0000244;Name=TSPY4
HG01358_chrY	CAT	exon	9038412	9038961	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000244:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9038458	9038961	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000244:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9038458	9038460	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000244;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9038962	9039568	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000244:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039569	9039646	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000244:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039569	9039646	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000244:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9039647	9039774	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000244:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039775	9039886	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000244:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039775	9039886	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000244:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9039887	9039994	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000244:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039995	9040133	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000244:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9039995	9040133	.	+	2	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000244:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9040134	9040239	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000244:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9040240	9040321	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000244:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9040240	9040291	.	+	1	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000244:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9040289	9040291	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000244;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9040322	9041015	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000244:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9041016	9041226	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000244;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000244;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000244:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9038412	9041226	1000	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_G0000087;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=HG01358_ch_T0000245;Name=TSPY4
HG01358_chrY	CAT	exon	9038412	9038961	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000245:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9038962	9039568	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000245:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039569	9039646	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000245:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9039647	9039774	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000245:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039775	9039886	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000245:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9039887	9039994	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000245:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9039995	9040133	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000245:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9040134	9040228	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000245:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9040229	9040321	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000245:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9040322	9041015	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000245:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9041016	9041226	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000245;gene_id=HG01358_ch_G0000087;Parent=HG01358_ch_T0000245;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000245:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9050521	9056107	.	-	.	source_gene_common_name=FAM197Y6;source_gene=hg002_chrY_paternal_217;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;gene_id=HG01358_ch_G0000088;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG01358_ch_G0000088;Name=FAM197Y6
HG01358_chrY	CAT	transcript	9050521	9056107	1000	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01358_ch_T0000246;gene_id=HG01358_ch_G0000088;Parent=HG01358_ch_G0000088;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=HG01358_ch_T0000246;Name=FAM197Y6
HG01358_chrY	CAT	exon	9050521	9050580	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01358_ch_T0000246;gene_id=HG01358_ch_G0000088;Parent=HG01358_ch_T0000246;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG01358_ch_T0000246:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9050581	9054130	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01358_ch_T0000246;gene_id=HG01358_ch_G0000088;Parent=HG01358_ch_T0000246;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG01358_ch_T0000246:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9054131	9054289	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01358_ch_T0000246;gene_id=HG01358_ch_G0000088;Parent=HG01358_ch_T0000246;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG01358_ch_T0000246:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9054290	9055773	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01358_ch_T0000246;gene_id=HG01358_ch_G0000088;Parent=HG01358_ch_T0000246;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG01358_ch_T0000246:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9055774	9055919	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01358_ch_T0000246;gene_id=HG01358_ch_G0000088;Parent=HG01358_ch_T0000246;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG01358_ch_T0000246:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9055920	9056005	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01358_ch_T0000246;gene_id=HG01358_ch_G0000088;Parent=HG01358_ch_T0000246;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG01358_ch_T0000246:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9056006	9056107	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01358_ch_T0000246;gene_id=HG01358_ch_G0000088;Parent=HG01358_ch_T0000246;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG01358_ch_T0000246:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9070808	9076493	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_163;alternative_source_transcripts=hg002_chrY_paternal_175.1;gene_id=HG01358_ch_G0000089;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff,transMap;ID=HG01358_ch_G0000089;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9070808	9076493	1000	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000247;gene_id=HG01358_ch_G0000089;Parent=HG01358_ch_G0000089;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000247;Name=FAM197Y2
HG01358_chrY	CAT	exon	9070808	9070867	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000247;gene_id=HG01358_ch_G0000089;Parent=HG01358_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000247:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9070868	9074411	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000247;gene_id=HG01358_ch_G0000089;Parent=HG01358_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000247:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9074412	9074570	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000247;gene_id=HG01358_ch_G0000089;Parent=HG01358_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000247:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9074571	9076070	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000247;gene_id=HG01358_ch_G0000089;Parent=HG01358_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000247:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9076071	9076216	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000247;gene_id=HG01358_ch_G0000089;Parent=HG01358_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000247:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9076217	9076302	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000247;gene_id=HG01358_ch_G0000089;Parent=HG01358_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000247:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9076303	9076493	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000247;gene_id=HG01358_ch_G0000089;Parent=HG01358_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000247:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9079017	9081813	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_168;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;gene_id=HG01358_ch_G0000090;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000090;Name=TSPY10
HG01358_chrY	CAT	transcript	9079017	9081813	100	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_G0000090;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG01358_ch_T0000248;Name=TSPY10
HG01358_chrY	CAT	exon	9079017	9079548	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9079063	9079548	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9079063	9079065	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000248;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9079549	9080155	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080156	9080233	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080156	9080233	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080234	9080361	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080362	9080473	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080362	9080473	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080474	9080574	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080575	9080720	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080575	9080720	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080721	9080826	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080827	9080908	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080827	9080908	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080909	9081602	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9081603	9081813	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000248:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9081603	9081625	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000248:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9081623	9081625	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000248;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000248;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000248;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9079017	9081813	100	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_G0000090;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG01358_ch_T0000249;Name=TSPY10
HG01358_chrY	CAT	exon	9079017	9079548	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9079063	9079548	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9079063	9079065	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000249;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9079549	9080155	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080156	9080233	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080156	9080233	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080234	9080361	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080362	9080473	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080362	9080473	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080474	9080574	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080575	9080720	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080575	9080720	.	+	2	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080721	9080815	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080816	9080908	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080816	9080878	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9080876	9080878	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000249;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080909	9081602	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9081603	9081813	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000249;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000249;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000249:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9079017	9081813	100	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_G0000090;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG01358_ch_T0000250;Name=TSPY10
HG01358_chrY	CAT	exon	9079017	9079548	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9079063	9079548	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9079063	9079065	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000250;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9079549	9080155	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080156	9080233	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080156	9080233	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080234	9080361	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080362	9080473	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080362	9080473	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080474	9080581	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080582	9080720	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080582	9080720	.	+	2	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080721	9080826	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080827	9080908	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9080827	9080878	.	+	1	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9080876	9080878	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000250;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080909	9081602	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9081603	9081813	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000250;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000250;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000250:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9079017	9081813	1000	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_G0000090;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=HG01358_ch_T0000251;Name=TSPY10
HG01358_chrY	CAT	exon	9079017	9079548	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9079549	9080155	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080156	9080233	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080234	9080361	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080362	9080473	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080474	9080581	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080582	9080720	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080721	9080815	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9080816	9080908	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9080909	9081602	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9081603	9081813	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_176.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000251;gene_id=HG01358_ch_G0000090;Parent=HG01358_ch_T0000251;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000251:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9091076	9096685	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_167;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;gene_id=HG01358_ch_G0000091;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000091;Name=FAM197Y3
HG01358_chrY	CAT	transcript	9091076	9096685	1000	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000252;gene_id=HG01358_ch_G0000091;Parent=HG01358_ch_G0000091;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000252;Name=FAM197Y3
HG01358_chrY	CAT	exon	9091076	9091135	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000252;gene_id=HG01358_ch_G0000091;Parent=HG01358_ch_T0000252;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000252:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9091136	9094686	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000252;gene_id=HG01358_ch_G0000091;Parent=HG01358_ch_T0000252;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000252:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9094687	9094845	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000252;gene_id=HG01358_ch_G0000091;Parent=HG01358_ch_T0000252;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000252:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9094846	9096351	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000252;gene_id=HG01358_ch_G0000091;Parent=HG01358_ch_T0000252;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000252:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9096352	9096497	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000252;gene_id=HG01358_ch_G0000091;Parent=HG01358_ch_T0000252;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000252:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9096498	9096583	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000252;gene_id=HG01358_ch_G0000091;Parent=HG01358_ch_T0000252;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000252:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9096584	9096685	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000252;gene_id=HG01358_ch_G0000091;Parent=HG01358_ch_T0000252;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000252:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9099298	9102094	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_238;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;gene_id=HG01358_ch_G0000092;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01358_ch_G0000092;Name=TSPY10
HG01358_chrY	CAT	transcript	9099298	9102094	100	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_G0000092;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG01358_ch_T0000253;Name=TSPY10
HG01358_chrY	CAT	exon	9099298	9099829	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9099344	9099829	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9099344	9099346	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9099830	9100436	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100437	9100514	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100437	9100514	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9100515	9100642	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100643	9100754	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100643	9100754	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9100755	9100855	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100856	9101001	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100856	9101001	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9101002	9101107	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9101108	9101189	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9101108	9101189	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9101190	9101883	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9101884	9102094	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000253:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9101884	9101906	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000253:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9101904	9101906	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG01358_ch_T0000253;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000253;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9099298	9102094	100	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_G0000092;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG01358_ch_T0000254;Name=TSPY10
HG01358_chrY	CAT	exon	9099298	9099829	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9099344	9099829	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9099344	9099346	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9099830	9100436	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100437	9100514	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100437	9100514	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9100515	9100642	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100643	9100754	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100643	9100754	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9100755	9100855	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100856	9101001	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100856	9101001	.	+	2	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9101002	9101096	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9101097	9101189	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9101097	9101159	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9101157	9101159	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9101190	9101883	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9101884	9102094	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG01358_ch_T0000254;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000254;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000254:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9099298	9102094	100	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_G0000092;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG01358_ch_T0000255;Name=TSPY10
HG01358_chrY	CAT	exon	9099298	9099829	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9099344	9099829	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9099344	9099346	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000255;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9099830	9100436	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100437	9100514	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100437	9100514	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9100515	9100642	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100643	9100754	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100643	9100754	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9100755	9100862	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100863	9101001	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9100863	9101001	.	+	2	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9101002	9101107	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9101108	9101189	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9101108	9101159	.	+	1	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9101157	9101159	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000255;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9101190	9101883	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9101884	9102094	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG01358_ch_T0000255;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000255;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000255:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9099298	9102094	1000	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_G0000092;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=HG01358_ch_T0000256;Name=TSPY10
HG01358_chrY	CAT	exon	9099298	9099829	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9099830	9100436	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100437	9100514	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9100515	9100642	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100643	9100754	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9100755	9100862	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9100863	9101001	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9101002	9101096	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9101097	9101189	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9101190	9101883	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9101884	9102094	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_168.4;transcript_id=HG01358_ch_T0000256;gene_id=HG01358_ch_G0000092;Parent=HG01358_ch_T0000256;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000256:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9111366	9116966	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_189;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;gene_id=HG01358_ch_G0000093;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000093;Name=FAM197Y3
HG01358_chrY	CAT	transcript	9111366	9116966	1000	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG01358_ch_T0000257;gene_id=HG01358_ch_G0000093;Parent=HG01358_ch_G0000093;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000257;Name=FAM197Y3
HG01358_chrY	CAT	exon	9111366	9111425	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG01358_ch_T0000257;gene_id=HG01358_ch_G0000093;Parent=HG01358_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000257:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9111426	9114973	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG01358_ch_T0000257;gene_id=HG01358_ch_G0000093;Parent=HG01358_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000257:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9114974	9115132	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG01358_ch_T0000257;gene_id=HG01358_ch_G0000093;Parent=HG01358_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000257:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9115133	9116632	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG01358_ch_T0000257;gene_id=HG01358_ch_G0000093;Parent=HG01358_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000257:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9116633	9116778	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG01358_ch_T0000257;gene_id=HG01358_ch_G0000093;Parent=HG01358_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000257:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9116779	9116864	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG01358_ch_T0000257;gene_id=HG01358_ch_G0000093;Parent=HG01358_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000257:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9116865	9116966	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG01358_ch_T0000257;gene_id=HG01358_ch_G0000093;Parent=HG01358_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000257:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9119575	9122371	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_192;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;gene_id=HG01358_ch_G0000094;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01358_ch_G0000094;Name=TSPY10
HG01358_chrY	CAT	transcript	9119575	9122371	100	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_G0000094;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG01358_ch_T0000258;Name=TSPY10
HG01358_chrY	CAT	exon	9119575	9120106	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9119621	9120106	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9119621	9119623	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9120107	9120713	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9120714	9120791	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9120714	9120791	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9120792	9120919	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9120920	9121031	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9120920	9121031	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121032	9121132	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9121133	9121278	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9121133	9121278	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121279	9121384	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9121385	9121466	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9121385	9121466	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121467	9122160	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9122161	9122371	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9122161	9122183	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9122181	9122183	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG01358_ch_T0000258;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9119575	9122371	100	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_G0000094;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG01358_ch_T0000259;Name=TSPY10
HG01358_chrY	CAT	exon	9119575	9120106	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9119621	9120106	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9119621	9119623	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9120107	9120713	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9120714	9120791	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9120714	9120791	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9120792	9120919	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9120920	9121031	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9120920	9121031	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121032	9121132	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9121133	9121278	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9121133	9121278	.	+	2	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121279	9121373	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9121374	9121466	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9121374	9121436	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9121434	9121436	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121467	9122160	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9122161	9122371	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG01358_ch_T0000259;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9119575	9122371	100	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_G0000094;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG01358_ch_T0000260;Name=TSPY10
HG01358_chrY	CAT	exon	9119575	9120106	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9119621	9120106	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9119621	9119623	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9120107	9120713	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9120714	9120791	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9120714	9120791	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9120792	9120919	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9120920	9121031	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9120920	9121031	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121032	9121139	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9121140	9121278	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9121140	9121278	.	+	2	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121279	9121384	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9121385	9121466	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9121385	9121436	.	+	1	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9121434	9121436	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121467	9122160	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9122161	9122371	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG01358_ch_T0000260;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000260:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9119575	9122371	1000	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_G0000094;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=HG01358_ch_T0000261;Name=TSPY10
HG01358_chrY	CAT	exon	9119575	9120106	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9120107	9120713	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9120714	9120791	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9120792	9120919	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9120920	9121031	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121032	9121139	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9121140	9121278	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121279	9121373	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9121374	9121466	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9121467	9122160	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9122161	9122371	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG01358_ch_T0000261;gene_id=HG01358_ch_G0000094;Parent=HG01358_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9131647	9137340	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_191;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;gene_id=HG01358_ch_G0000095;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000095;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9131647	9137340	1000	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000262;gene_id=HG01358_ch_G0000095;Parent=HG01358_ch_G0000095;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000262;Name=FAM197Y2
HG01358_chrY	CAT	exon	9131647	9131706	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000262;gene_id=HG01358_ch_G0000095;Parent=HG01358_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000262:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9131707	9135256	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000262;gene_id=HG01358_ch_G0000095;Parent=HG01358_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000262:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9135257	9135415	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000262;gene_id=HG01358_ch_G0000095;Parent=HG01358_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000262:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9135416	9136917	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000262;gene_id=HG01358_ch_G0000095;Parent=HG01358_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000262:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9136918	9137063	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000262;gene_id=HG01358_ch_G0000095;Parent=HG01358_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000262:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9137064	9137149	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000262;gene_id=HG01358_ch_G0000095;Parent=HG01358_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000262:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9137150	9137340	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000262;gene_id=HG01358_ch_G0000095;Parent=HG01358_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000262:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9139864	9142660	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_170;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;gene_id=HG01358_ch_G0000096;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000096;Name=TSPY10
HG01358_chrY	CAT	transcript	9139864	9142660	100	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_G0000096;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG01358_ch_T0000263;Name=TSPY10
HG01358_chrY	CAT	exon	9139864	9140395	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9139910	9140395	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9139910	9139912	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9140396	9141002	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141003	9141080	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141003	9141080	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141081	9141208	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141209	9141320	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141209	9141320	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141321	9141421	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141422	9141567	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141422	9141567	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141568	9141673	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141674	9141755	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141674	9141755	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141756	9142449	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9142450	9142660	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9142450	9142472	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9142470	9142472	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000263;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9139864	9142660	100	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_G0000096;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG01358_ch_T0000264;Name=TSPY10
HG01358_chrY	CAT	exon	9139864	9140395	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9139910	9140395	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9139910	9139912	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9140396	9141002	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141003	9141080	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141003	9141080	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141081	9141208	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141209	9141320	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141209	9141320	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141321	9141421	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141422	9141567	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141422	9141567	.	+	2	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141568	9141662	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141663	9141755	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141663	9141725	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9141723	9141725	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141756	9142449	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9142450	9142660	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000264;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9139864	9142660	100	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_G0000096;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG01358_ch_T0000265;Name=TSPY10
HG01358_chrY	CAT	exon	9139864	9140395	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9139910	9140395	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9139910	9139912	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9140396	9141002	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141003	9141080	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141003	9141080	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141081	9141208	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141209	9141320	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141209	9141320	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141321	9141428	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141429	9141567	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141429	9141567	.	+	2	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141568	9141673	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141674	9141755	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9141674	9141725	.	+	1	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9141723	9141725	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141756	9142449	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9142450	9142660	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000265;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000265:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9139864	9142660	1000	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_G0000096;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=HG01358_ch_T0000266;Name=TSPY10
HG01358_chrY	CAT	exon	9139864	9140395	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9140396	9141002	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141003	9141080	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141081	9141208	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141209	9141320	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141321	9141428	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141429	9141567	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141568	9141662	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9141663	9141755	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9141756	9142449	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9142450	9142660	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000266;gene_id=HG01358_ch_G0000096;Parent=HG01358_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000266:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9151920	9157602	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_193;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;gene_id=HG01358_ch_G0000097;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000097;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9151920	9157602	1000	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000267;gene_id=HG01358_ch_G0000097;Parent=HG01358_ch_G0000097;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000267;Name=FAM197Y2
HG01358_chrY	CAT	exon	9151920	9151979	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000267;gene_id=HG01358_ch_G0000097;Parent=HG01358_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000267:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9151980	9155528	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000267;gene_id=HG01358_ch_G0000097;Parent=HG01358_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000267:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9155529	9155687	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000267;gene_id=HG01358_ch_G0000097;Parent=HG01358_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000267:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9155688	9157179	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000267;gene_id=HG01358_ch_G0000097;Parent=HG01358_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000267:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9157180	9157325	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000267;gene_id=HG01358_ch_G0000097;Parent=HG01358_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000267:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9157326	9157411	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000267;gene_id=HG01358_ch_G0000097;Parent=HG01358_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000267:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9157412	9157602	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000267;gene_id=HG01358_ch_G0000097;Parent=HG01358_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000267:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9160126	9162940	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_194;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;gene_id=HG01358_ch_G0000098;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01358_ch_G0000098;Name=TSPY4
HG01358_chrY	CAT	transcript	9160126	9162940	100	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_G0000098;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG01358_ch_T0000268;Name=TSPY4
HG01358_chrY	CAT	exon	9160126	9160675	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9160172	9160675	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9160172	9160174	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000268;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9160676	9161282	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161283	9161360	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161283	9161360	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161361	9161488	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161489	9161600	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161489	9161600	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161601	9161701	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161702	9161847	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161702	9161847	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161848	9161953	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161954	9162035	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161954	9162035	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9162036	9162729	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9162730	9162940	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000268:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9162730	9162752	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000268:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9162750	9162752	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG01358_ch_T0000268;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000268;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9160126	9162940	100	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_G0000098;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG01358_ch_T0000269;Name=TSPY4
HG01358_chrY	CAT	exon	9160126	9160675	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9160172	9160675	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9160172	9160174	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000269;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9160676	9161282	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161283	9161360	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161283	9161360	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161361	9161488	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161489	9161600	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161489	9161600	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161601	9161701	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161702	9161847	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161702	9161847	.	+	2	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161848	9161942	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161943	9162035	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161943	9162005	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9162003	9162005	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000269;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9162036	9162729	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9162730	9162940	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG01358_ch_T0000269;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000269:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9160126	9162940	100	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_G0000098;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG01358_ch_T0000270;Name=TSPY4
HG01358_chrY	CAT	exon	9160126	9160675	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9160172	9160675	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9160172	9160174	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000270;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9160676	9161282	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161283	9161360	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161283	9161360	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161361	9161488	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161489	9161600	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161489	9161600	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161601	9161708	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161709	9161847	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161709	9161847	.	+	2	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161848	9161953	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161954	9162035	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9161954	9162005	.	+	1	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9162003	9162005	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000270;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9162036	9162729	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9162730	9162940	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG01358_ch_T0000270;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000270:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9160126	9162940	1000	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_G0000098;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=HG01358_ch_T0000271;Name=TSPY4
HG01358_chrY	CAT	exon	9160126	9160675	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9160676	9161282	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161283	9161360	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161361	9161488	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161489	9161600	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161601	9161708	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161709	9161847	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9161848	9161942	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9161943	9162035	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9162036	9162729	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9162730	9162940	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG01358_ch_T0000271;gene_id=HG01358_ch_G0000098;Parent=HG01358_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000271:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9172216	9175983	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_185;gene_id=HG01358_ch_G0000099;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff,transMap_pairwise;ID=HG01358_ch_G0000099;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9172216	9175983	1000	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000272;gene_id=HG01358_ch_G0000099;Parent=HG01358_ch_G0000099;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000272;Name=FAM197Y2
HG01358_chrY	CAT	exon	9172216	9172275	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000272;gene_id=HG01358_ch_G0000099;Parent=HG01358_ch_T0000272;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000272:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9172276	9175824	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000272;gene_id=HG01358_ch_G0000099;Parent=HG01358_ch_T0000272;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000272:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9175825	9175983	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000272;gene_id=HG01358_ch_G0000099;Parent=HG01358_ch_T0000272;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000272:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9180432	9183246	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_206;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;gene_id=HG01358_ch_G0000100;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01358_ch_G0000100;Name=TSPY4
HG01358_chrY	CAT	transcript	9180432	9183246	100	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_G0000100;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG01358_ch_T0000273;Name=TSPY4
HG01358_chrY	CAT	exon	9180432	9180981	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9180478	9180981	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9180478	9180480	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000273;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9180982	9181588	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9181589	9181666	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9181589	9181666	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9181667	9181794	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9181795	9181906	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9181795	9181906	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9181907	9182007	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9182008	9182153	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9182008	9182153	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9182154	9182259	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9182260	9182341	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9182260	9182341	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9182342	9183035	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9183036	9183246	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000273:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9183036	9183058	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000273:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9183056	9183058	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;transcript_id=HG01358_ch_T0000273;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000273;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000273;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9180432	9183246	100	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_G0000100;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG01358_ch_T0000274;Name=TSPY4
HG01358_chrY	CAT	exon	9180432	9180981	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9180478	9180981	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9180478	9180480	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000274;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9180982	9181588	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9181589	9181666	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9181589	9181666	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9181667	9181794	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9181795	9181906	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9181795	9181906	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9181907	9182007	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9182008	9182153	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9182008	9182153	.	+	2	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9182154	9182248	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9182249	9182341	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9182249	9182311	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9182309	9182311	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000274;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9182342	9183035	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9183036	9183246	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;transcript_id=HG01358_ch_T0000274;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000274;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000274:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9180432	9183246	100	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_G0000100;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG01358_ch_T0000275;Name=TSPY4
HG01358_chrY	CAT	exon	9180432	9180981	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9180478	9180981	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9180478	9180480	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000275;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9180982	9181588	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9181589	9181666	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9181589	9181666	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9181667	9181794	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9181795	9181906	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9181795	9181906	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9181907	9182014	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9182015	9182153	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9182015	9182153	.	+	2	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9182154	9182259	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9182260	9182341	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9182260	9182311	.	+	1	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9182309	9182311	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000275;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9182342	9183035	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9183036	9183246	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000275;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000275;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000275:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9180432	9183246	1000	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_G0000100;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=HG01358_ch_T0000276;Name=TSPY4
HG01358_chrY	CAT	exon	9180432	9180981	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000276:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9180982	9181588	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000276:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9181589	9181666	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000276:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9181667	9181794	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000276:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9181795	9181906	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000276:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9181907	9182014	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000276:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9182015	9182153	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000276:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9182154	9182248	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000276:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9182249	9182341	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000276:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9182342	9183035	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000276:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9183036	9183246	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000276;gene_id=HG01358_ch_G0000100;Parent=HG01358_ch_T0000276;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000276:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9192539	9198145	.	-	.	source_gene_common_name=FAM197Y4;source_gene=hg002_chrY_paternal_223;alternative_source_transcripts=hg002_chrY_paternal_177.1;gene_id=HG01358_ch_G0000101;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG01358_ch_G0000101;Name=FAM197Y4
HG01358_chrY	CAT	transcript	9192539	9198145	1000	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000277;gene_id=HG01358_ch_G0000101;Parent=HG01358_ch_G0000101;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=HG01358_ch_T0000277;Name=FAM197Y4
HG01358_chrY	CAT	exon	9192539	9192598	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000277;gene_id=HG01358_ch_G0000101;Parent=HG01358_ch_T0000277;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG01358_ch_T0000277:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9192599	9196152	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000277;gene_id=HG01358_ch_G0000101;Parent=HG01358_ch_T0000277;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG01358_ch_T0000277:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9196153	9196311	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000277;gene_id=HG01358_ch_G0000101;Parent=HG01358_ch_T0000277;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG01358_ch_T0000277:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9196312	9197811	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000277;gene_id=HG01358_ch_G0000101;Parent=HG01358_ch_T0000277;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG01358_ch_T0000277:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9197812	9197957	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000277;gene_id=HG01358_ch_G0000101;Parent=HG01358_ch_T0000277;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG01358_ch_T0000277:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9197958	9198043	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000277;gene_id=HG01358_ch_G0000101;Parent=HG01358_ch_T0000277;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG01358_ch_T0000277:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9198044	9198145	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG01358_ch_T0000277;gene_id=HG01358_ch_G0000101;Parent=HG01358_ch_T0000277;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG01358_ch_T0000277:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9200758	9203554	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;gene_id=HG01358_ch_G0000102;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01358_ch_G0000102;Name=TSPY1
HG01358_chrY	CAT	transcript	9200758	9203554	100	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_G0000102;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01358_ch_T0000278;Name=TSPY1
HG01358_chrY	CAT	exon	9200758	9201289	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9200804	9201289	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9200804	9200806	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000278;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201290	9201896	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9201897	9201974	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9201897	9201974	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201975	9202102	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202103	9202214	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202103	9202214	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202215	9202315	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202316	9202461	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202316	9202461	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202462	9202567	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202568	9202649	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202568	9202649	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202650	9203343	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9203344	9203554	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9203344	9203366	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9203364	9203366	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG01358_ch_T0000278;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000278;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9200758	9203554	100	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_G0000102;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01358_ch_T0000279;Name=TSPY1
HG01358_chrY	CAT	exon	9200758	9201289	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9200804	9201289	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9200804	9200806	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000279;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201290	9201896	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9201897	9201974	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9201897	9201974	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201975	9202102	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202103	9202214	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202103	9202214	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202215	9202315	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202316	9202461	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202316	9202461	.	+	2	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202462	9202556	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202557	9202649	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202557	9202619	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9202617	9202619	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000279;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202650	9203343	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9203344	9203554	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG01358_ch_T0000279;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000279:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9200758	9203554	100	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_G0000102;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01358_ch_T0000280;Name=TSPY1
HG01358_chrY	CAT	exon	9200758	9201289	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9200804	9201289	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9200804	9200806	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201290	9201896	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9201897	9201974	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9201897	9201974	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201975	9202102	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202103	9202214	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202103	9202214	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202215	9202322	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202323	9202461	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202323	9202461	.	+	2	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202462	9202567	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202568	9202649	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202568	9202619	.	+	1	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9202617	9202619	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202650	9203343	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9203344	9203554	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG01358_ch_T0000280;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000280:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9200758	9203554	1000	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_G0000102;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=HG01358_ch_T0000281;Name=TSPY1
HG01358_chrY	CAT	exon	9200758	9201289	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201290	9201896	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9201897	9201974	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201975	9202102	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202103	9202214	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202215	9202322	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202323	9202461	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202462	9202556	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202557	9202649	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202650	9203343	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9203344	9203554	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG01358_ch_T0000281;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000281:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9200758	9203554	100	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_G0000102;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01358_ch_T0000282;Name=TSPY1
HG01358_chrY	CAT	exon	9200758	9200890	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9200804	9200890	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9200804	9200806	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9200891	9201151	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9201152	9201289	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9201152	9201289	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201290	9201896	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9201897	9201974	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9201897	9201974	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9201975	9202102	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202103	9202214	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202103	9202214	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202215	9202315	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202316	9202461	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202316	9202461	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202462	9202567	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9202568	9202649	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9202568	9202649	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9202650	9203343	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9203344	9203554	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000282:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9203344	9203366	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000282:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9203364	9203366	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000282;gene_id=HG01358_ch_G0000102;Parent=HG01358_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9212834	9218450	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_197;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;gene_id=HG01358_ch_G0000103;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000103;Name=FAM197Y3
HG01358_chrY	CAT	transcript	9212834	9218450	1000	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000283;gene_id=HG01358_ch_G0000103;Parent=HG01358_ch_G0000103;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000283;Name=FAM197Y3
HG01358_chrY	CAT	exon	9212834	9212893	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000283;gene_id=HG01358_ch_G0000103;Parent=HG01358_ch_T0000283;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000283:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9212894	9216449	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000283;gene_id=HG01358_ch_G0000103;Parent=HG01358_ch_T0000283;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000283:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9216450	9216608	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000283;gene_id=HG01358_ch_G0000103;Parent=HG01358_ch_T0000283;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000283:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9216609	9218116	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000283;gene_id=HG01358_ch_G0000103;Parent=HG01358_ch_T0000283;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000283:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9218117	9218262	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000283;gene_id=HG01358_ch_G0000103;Parent=HG01358_ch_T0000283;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000283:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9218263	9218348	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000283;gene_id=HG01358_ch_G0000103;Parent=HG01358_ch_T0000283;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000283:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9218349	9218450	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000283;gene_id=HG01358_ch_G0000103;Parent=HG01358_ch_T0000283;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000283:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9233130	9238829	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_207;alternative_source_transcripts=hg002_chrY_paternal_181.1;gene_id=HG01358_ch_G0000104;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000104;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9233130	9238829	1000	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000284;gene_id=HG01358_ch_G0000104;Parent=HG01358_ch_G0000104;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000284;Name=FAM197Y2
HG01358_chrY	CAT	exon	9233130	9233189	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000284;gene_id=HG01358_ch_G0000104;Parent=HG01358_ch_T0000284;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000284:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9233190	9236739	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000284;gene_id=HG01358_ch_G0000104;Parent=HG01358_ch_T0000284;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000284:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9236740	9236898	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000284;gene_id=HG01358_ch_G0000104;Parent=HG01358_ch_T0000284;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000284:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9236899	9238406	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000284;gene_id=HG01358_ch_G0000104;Parent=HG01358_ch_T0000284;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000284:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9238407	9238552	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000284;gene_id=HG01358_ch_G0000104;Parent=HG01358_ch_T0000284;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000284:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9238553	9238638	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000284;gene_id=HG01358_ch_G0000104;Parent=HG01358_ch_T0000284;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000284:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9238639	9238829	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG01358_ch_T0000284;gene_id=HG01358_ch_G0000104;Parent=HG01358_ch_T0000284;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000284:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9241353	9244167	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;gene_id=HG01358_ch_G0000105;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000105;Name=TSPY4
HG01358_chrY	CAT	transcript	9241353	9244167	100	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_G0000105;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG01358_ch_T0000285;Name=TSPY4
HG01358_chrY	CAT	exon	9241353	9241902	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000285:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9241399	9241902	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000285:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9241399	9241401	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000285;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9241903	9242509	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000285:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242510	9242587	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000285:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242510	9242587	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000285:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9242588	9242715	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000285:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242716	9242827	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000285:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242716	9242827	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000285:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9242828	9242928	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000285:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242929	9243074	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000285:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242929	9243074	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000285:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9243075	9243180	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000285:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9243181	9243262	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000285:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9243181	9243262	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000285:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9243263	9243956	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000285:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9243957	9244167	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000285:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9243957	9243979	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000285:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9243977	9243979	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000285;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000285;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000285;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9241353	9244167	100	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_G0000105;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG01358_ch_T0000286;Name=TSPY4
HG01358_chrY	CAT	exon	9241353	9241902	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000286:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9241399	9241902	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000286:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9241399	9241401	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000286;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9241903	9242509	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000286:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242510	9242587	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000286:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242510	9242587	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000286:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9242588	9242715	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000286:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242716	9242827	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000286:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242716	9242827	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000286:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9242828	9242928	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000286:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242929	9243074	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000286:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242929	9243074	.	+	2	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000286:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9243075	9243169	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000286:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9243170	9243262	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000286:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9243170	9243232	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000286:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9243230	9243232	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000286;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9243263	9243956	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000286:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9243957	9244167	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000286;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000286;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000286:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9241353	9244167	100	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_G0000105;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG01358_ch_T0000287;Name=TSPY4
HG01358_chrY	CAT	exon	9241353	9241902	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000287:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9241399	9241902	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000287:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9241399	9241401	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000287;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9241903	9242509	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000287:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242510	9242587	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000287:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242510	9242587	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000287:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9242588	9242715	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000287:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242716	9242827	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000287:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242716	9242827	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000287:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9242828	9242935	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000287:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242936	9243074	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000287:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9242936	9243074	.	+	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000287:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9243075	9243180	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000287:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9243181	9243262	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000287:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9243181	9243232	.	+	1	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000287:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9243230	9243232	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000287;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9243263	9243956	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000287:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9243957	9244167	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000287;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000287;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000287:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9241353	9244167	1000	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_G0000105;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=HG01358_ch_T0000288;Name=TSPY4
HG01358_chrY	CAT	exon	9241353	9241902	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000288:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9241903	9242509	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000288:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242510	9242587	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000288:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9242588	9242715	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000288:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242716	9242827	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000288:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9242828	9242935	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000288:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9242936	9243074	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000288:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9243075	9243169	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000288:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9243170	9243262	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000288:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9243263	9243956	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000288:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9243957	9244167	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000288;gene_id=HG01358_ch_G0000105;Parent=HG01358_ch_T0000288;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000288:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9253454	9259149	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_227;alternative_source_transcripts=hg002_chrY_paternal_183.1;gene_id=HG01358_ch_G0000106;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000106;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9253454	9259149	1000	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000289;gene_id=HG01358_ch_G0000106;Parent=HG01358_ch_G0000106;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000289;Name=FAM197Y2
HG01358_chrY	CAT	exon	9253454	9253513	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000289;gene_id=HG01358_ch_G0000106;Parent=HG01358_ch_T0000289;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000289:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9253514	9257067	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000289;gene_id=HG01358_ch_G0000106;Parent=HG01358_ch_T0000289;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000289:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9257068	9257226	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000289;gene_id=HG01358_ch_G0000106;Parent=HG01358_ch_T0000289;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000289:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9257227	9258726	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000289;gene_id=HG01358_ch_G0000106;Parent=HG01358_ch_T0000289;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000289:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9258727	9258872	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000289;gene_id=HG01358_ch_G0000106;Parent=HG01358_ch_T0000289;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000289:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9258873	9258958	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000289;gene_id=HG01358_ch_G0000106;Parent=HG01358_ch_T0000289;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000289:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9258959	9259149	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG01358_ch_T0000289;gene_id=HG01358_ch_G0000106;Parent=HG01358_ch_T0000289;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000289:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9261673	9264487	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;gene_id=HG01358_ch_G0000107;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=augTM,transMap;ID=HG01358_ch_G0000107;Name=TSPY4
HG01358_chrY	CAT	transcript	9261673	9264487	9980	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_G0000107;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG01358_ch_T0000290;Name=TSPY4
HG01358_chrY	CAT	exon	9261673	9262222	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000290:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9261719	9262222	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000290:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9261719	9261721	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG01358_ch_T0000290;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9262223	9262829	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000290:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9262830	9262907	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000290:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9262830	9262907	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000290:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9262908	9263035	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000290:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9263036	9263147	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000290:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9263036	9263147	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000290:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9263148	9263255	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000290:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9263256	9263394	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000290:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9263256	9263394	.	+	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000290:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9263395	9263500	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000290:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9263501	9263582	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000290:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9263501	9263552	.	+	1	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01358_ch_T0000290:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9263550	9263552	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG01358_ch_T0000290;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9263583	9264276	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01358_ch_T0000290:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9264277	9264487	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000290;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000290;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01358_ch_T0000290:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9261673	9264487	1000	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_G0000107;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=HG01358_ch_T0000291;Name=TSPY4
HG01358_chrY	CAT	exon	9261673	9262222	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000291:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9262223	9262829	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000291:0;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9262830	9262907	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000291:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9262908	9263035	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000291:1;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9263036	9263147	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000291:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9263148	9263255	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000291:2;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9263256	9263394	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000291:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9263395	9263489	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000291:3;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9263490	9263582	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000291:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9263583	9264276	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01358_ch_T0000291:4;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9264277	9264487	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000291;gene_id=HG01358_ch_G0000107;Parent=HG01358_ch_T0000291;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01358_ch_T0000291:5;Name=TSPY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9273759	9279366	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_225;alternative_source_transcripts=hg002_chrY_paternal_203.1;gene_id=HG01358_ch_G0000108;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000108;Name=FAM197Y3
HG01358_chrY	CAT	transcript	9273759	9279366	1000	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG01358_ch_T0000292;gene_id=HG01358_ch_G0000108;Parent=HG01358_ch_G0000108;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000292;Name=FAM197Y3
HG01358_chrY	CAT	exon	9273759	9273818	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG01358_ch_T0000292;gene_id=HG01358_ch_G0000108;Parent=HG01358_ch_T0000292;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000292:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9273819	9277369	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG01358_ch_T0000292;gene_id=HG01358_ch_G0000108;Parent=HG01358_ch_T0000292;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000292:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9277370	9277528	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG01358_ch_T0000292;gene_id=HG01358_ch_G0000108;Parent=HG01358_ch_T0000292;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000292:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9277529	9279032	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG01358_ch_T0000292;gene_id=HG01358_ch_G0000108;Parent=HG01358_ch_T0000292;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000292:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9279033	9279178	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG01358_ch_T0000292;gene_id=HG01358_ch_G0000108;Parent=HG01358_ch_T0000292;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000292:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9279179	9279264	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG01358_ch_T0000292;gene_id=HG01358_ch_G0000108;Parent=HG01358_ch_T0000292;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000292:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9279265	9279366	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG01358_ch_T0000292;gene_id=HG01358_ch_G0000108;Parent=HG01358_ch_T0000292;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000292:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9281977	9284773	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_226;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;gene_id=HG01358_ch_G0000109;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01358_ch_G0000109;Name=TSPY10
HG01358_chrY	CAT	transcript	9281977	9284773	100	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_G0000109;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG01358_ch_T0000293;Name=TSPY10
HG01358_chrY	CAT	exon	9281977	9282508	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9282023	9282508	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9282023	9282025	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9282509	9283115	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283116	9283193	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283116	9283193	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283194	9283321	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283322	9283433	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283322	9283433	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283434	9283534	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283535	9283680	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283535	9283680	.	+	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283681	9283786	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283787	9283868	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283787	9283868	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283869	9284562	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9284563	9284773	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000293:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9284563	9284585	.	+	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000293:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9284583	9284585	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG01358_ch_T0000293;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000293;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9281977	9284773	100	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_G0000109;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG01358_ch_T0000294;Name=TSPY10
HG01358_chrY	CAT	exon	9281977	9282508	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9282023	9282508	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9282023	9282025	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000294;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9282509	9283115	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283116	9283193	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283116	9283193	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283194	9283321	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283322	9283433	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283322	9283433	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283434	9283534	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283535	9283680	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283535	9283680	.	+	2	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283681	9283775	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283776	9283868	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283776	9283838	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9283836	9283838	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000294;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283869	9284562	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9284563	9284773	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG01358_ch_T0000294;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000294;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000294:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9281977	9284773	100	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_G0000109;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG01358_ch_T0000295;Name=TSPY10
HG01358_chrY	CAT	exon	9281977	9282508	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000295:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9282023	9282508	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000295:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9282023	9282025	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000295;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9282509	9283115	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000295:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283116	9283193	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000295:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283116	9283193	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000295:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283194	9283321	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000295:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283322	9283433	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000295:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283322	9283433	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000295:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283434	9283541	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000295:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283542	9283680	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000295:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283542	9283680	.	+	2	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000295:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283681	9283786	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000295:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283787	9283868	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000295:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9283787	9283838	.	+	1	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000295:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9283836	9283838	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000295;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283869	9284562	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000295:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9284563	9284773	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG01358_ch_T0000295;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000295;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000295:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9281977	9284773	1000	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_G0000109;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=HG01358_ch_T0000296;Name=TSPY10
HG01358_chrY	CAT	exon	9281977	9282508	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000296:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9282509	9283115	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000296:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283116	9283193	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000296:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283194	9283321	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000296:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283322	9283433	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000296:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283434	9283541	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000296:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283542	9283680	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000296:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283681	9283775	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000296:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9283776	9283868	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000296:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9283869	9284562	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000296:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9284563	9284773	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG01358_ch_T0000296;gene_id=HG01358_ch_G0000109;Parent=HG01358_ch_T0000296;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000296:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9294042	9299732	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_209;gene_id=HG01358_ch_G0000110;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000110;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9294042	9299732	1000	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000297;gene_id=HG01358_ch_G0000110;Parent=HG01358_ch_G0000110;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000297;Name=FAM197Y2
HG01358_chrY	CAT	exon	9294042	9294101	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000297;gene_id=HG01358_ch_G0000110;Parent=HG01358_ch_T0000297;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000297:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9294102	9297652	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000297;gene_id=HG01358_ch_G0000110;Parent=HG01358_ch_T0000297;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000297:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9297653	9297811	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000297;gene_id=HG01358_ch_G0000110;Parent=HG01358_ch_T0000297;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000297:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9297812	9299309	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000297;gene_id=HG01358_ch_G0000110;Parent=HG01358_ch_T0000297;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000297:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9299310	9299455	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000297;gene_id=HG01358_ch_G0000110;Parent=HG01358_ch_T0000297;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000297:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9299456	9299541	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000297;gene_id=HG01358_ch_G0000110;Parent=HG01358_ch_T0000297;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000297:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9299542	9299732	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000297;gene_id=HG01358_ch_G0000110;Parent=HG01358_ch_T0000297;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000297:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9302256	9305053	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;gene_id=HG01358_ch_G0000111;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01358_ch_G0000111;Name=TSPY10
HG01358_chrY	CAT	transcript	9302256	9305053	100	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_G0000111;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG01358_ch_T0000298;Name=TSPY10
HG01358_chrY	CAT	exon	9302256	9302787	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000298:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9302302	9302787	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000298:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9302302	9302304	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000298;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9302788	9303394	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000298:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303395	9303472	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000298:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303395	9303472	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000298:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303473	9303600	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000298:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303601	9303712	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000298:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303601	9303712	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000298:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303713	9303813	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000298:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303814	9303959	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000298:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303814	9303959	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000298:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303960	9304065	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000298:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9304066	9304147	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000298:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9304066	9304147	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000298:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9304148	9304841	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000298:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9304842	9305053	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000298:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9304842	9304864	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000298:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9304862	9304864	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG01358_ch_T0000298;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000298;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000298;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9302256	9305053	100	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_G0000111;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG01358_ch_T0000299;Name=TSPY10
HG01358_chrY	CAT	exon	9302256	9302787	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000299:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9302302	9302787	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000299:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9302302	9302304	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000299;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9302788	9303394	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000299:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303395	9303472	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000299:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303395	9303472	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000299:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303473	9303600	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000299:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303601	9303712	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000299:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303601	9303712	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000299:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303713	9303813	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000299:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303814	9303959	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000299:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303814	9303959	.	+	2	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000299:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303960	9304054	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000299:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9304055	9304147	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000299:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9304055	9304117	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000299:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9304115	9304117	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000299;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9304148	9304841	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000299:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9304842	9305053	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG01358_ch_T0000299;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000299;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000299:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9302256	9305053	100	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_G0000111;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG01358_ch_T0000300;Name=TSPY10
HG01358_chrY	CAT	exon	9302256	9302787	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000300:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9302302	9302787	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000300:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9302302	9302304	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000300;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9302788	9303394	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000300:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303395	9303472	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000300:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303395	9303472	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000300:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303473	9303600	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000300:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303601	9303712	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000300:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303601	9303712	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000300:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303713	9303820	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000300:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303821	9303959	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000300:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9303821	9303959	.	+	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000300:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303960	9304065	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000300:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9304066	9304147	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000300:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9304066	9304117	.	+	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000300:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9304115	9304117	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000300;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9304148	9304841	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000300:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9304842	9305053	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG01358_ch_T0000300;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000300;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000300:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9302256	9305053	1000	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_G0000111;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=HG01358_ch_T0000301;Name=TSPY10
HG01358_chrY	CAT	exon	9302256	9302787	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000301:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9302788	9303394	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000301:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303395	9303472	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000301:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303473	9303600	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000301:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303601	9303712	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000301:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303713	9303820	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000301:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9303821	9303959	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000301:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9303960	9304054	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000301:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9304055	9304147	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000301:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9304148	9304841	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000301:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9304842	9305053	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG01358_ch_T0000301;gene_id=HG01358_ch_G0000111;Parent=HG01358_ch_T0000301;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000301:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9314357	9320041	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_233;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;gene_id=HG01358_ch_G0000112;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000112;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9314357	9320041	1000	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG01358_ch_T0000302;gene_id=HG01358_ch_G0000112;Parent=HG01358_ch_G0000112;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000302;Name=FAM197Y2
HG01358_chrY	CAT	exon	9314357	9314416	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG01358_ch_T0000302;gene_id=HG01358_ch_G0000112;Parent=HG01358_ch_T0000302;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000302:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9314417	9317963	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG01358_ch_T0000302;gene_id=HG01358_ch_G0000112;Parent=HG01358_ch_T0000302;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000302:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9317964	9318122	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG01358_ch_T0000302;gene_id=HG01358_ch_G0000112;Parent=HG01358_ch_T0000302;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000302:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9318123	9319618	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG01358_ch_T0000302;gene_id=HG01358_ch_G0000112;Parent=HG01358_ch_T0000302;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000302:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9319619	9319764	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG01358_ch_T0000302;gene_id=HG01358_ch_G0000112;Parent=HG01358_ch_T0000302;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000302:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9319765	9319850	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG01358_ch_T0000302;gene_id=HG01358_ch_G0000112;Parent=HG01358_ch_T0000302;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000302:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9319851	9320041	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG01358_ch_T0000302;gene_id=HG01358_ch_G0000112;Parent=HG01358_ch_T0000302;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000302:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9322566	9325362	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;gene_id=HG01358_ch_G0000113;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01358_ch_G0000113;Name=TSPY1
HG01358_chrY	CAT	transcript	9322566	9325362	100	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_G0000113;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01358_ch_T0000303;Name=TSPY1
HG01358_chrY	CAT	exon	9322566	9323097	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000303:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9322612	9323097	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000303:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9322612	9322614	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000303;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323098	9323704	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000303:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323705	9323782	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000303:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9323705	9323782	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000303:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323783	9323910	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000303:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323911	9324022	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000303:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9323911	9324022	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000303:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324023	9324123	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000303:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324124	9324269	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000303:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9324124	9324269	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000303:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324270	9324375	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000303:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324376	9324457	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000303:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9324376	9324457	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000303:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324458	9325151	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000303:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9325152	9325362	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000303:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9325152	9325174	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000303:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9325172	9325174	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG01358_ch_T0000303;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000303;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000303;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9322566	9325362	100	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_G0000113;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01358_ch_T0000304;Name=TSPY1
HG01358_chrY	CAT	exon	9322566	9323097	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000304:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9322612	9323097	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000304:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9322612	9322614	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000304;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323098	9323704	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000304:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323705	9323782	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000304:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9323705	9323782	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000304:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323783	9323910	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000304:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323911	9324022	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000304:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9323911	9324022	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000304:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324023	9324123	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000304:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324124	9324269	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000304:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9324124	9324269	.	+	2	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000304:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324270	9324364	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000304:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324365	9324457	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000304:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9324365	9324427	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000304:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9324425	9324427	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000304;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324458	9325151	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000304:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9325152	9325362	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG01358_ch_T0000304;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000304;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000304:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9322566	9325362	100	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_G0000113;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01358_ch_T0000305;Name=TSPY1
HG01358_chrY	CAT	exon	9322566	9323097	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000305:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9322612	9323097	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000305:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9322612	9322614	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000305;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323098	9323704	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000305:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323705	9323782	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000305:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9323705	9323782	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000305:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323783	9323910	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000305:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323911	9324022	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000305:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9323911	9324022	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000305:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324023	9324130	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000305:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324131	9324269	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000305:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9324131	9324269	.	+	2	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000305:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324270	9324375	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000305:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324376	9324457	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000305:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9324376	9324427	.	+	1	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000305:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9324425	9324427	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000305;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324458	9325151	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000305:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9325152	9325362	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG01358_ch_T0000305;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000305;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000305:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9322566	9325362	1000	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_G0000113;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=HG01358_ch_T0000306;Name=TSPY1
HG01358_chrY	CAT	exon	9322566	9323097	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000306:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323098	9323704	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000306:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323705	9323782	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000306:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323783	9323910	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000306:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323911	9324022	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000306:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324023	9324130	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000306:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324131	9324269	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000306:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324270	9324364	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000306:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324365	9324457	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000306:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324458	9325151	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000306:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9325152	9325362	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG01358_ch_T0000306;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000306;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000306:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9322566	9325362	100	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_G0000113;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01358_ch_T0000307;Name=TSPY1
HG01358_chrY	CAT	exon	9322566	9322698	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000307:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9322612	9322698	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000307:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9322612	9322614	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000307;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9322699	9322959	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000307:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9322960	9323097	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000307:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9322960	9323097	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000307:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323098	9323704	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000307:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323705	9323782	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000307:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9323705	9323782	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000307:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9323783	9323910	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000307:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9323911	9324022	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000307:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9323911	9324022	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000307:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324023	9324123	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000307:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324124	9324269	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000307:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9324124	9324269	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000307:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324270	9324375	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000307:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9324376	9324457	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000307:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9324376	9324457	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000307:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9324458	9325151	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000307:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9325152	9325362	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000307:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9325152	9325174	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000307:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9325172	9325174	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000307;gene_id=HG01358_ch_G0000113;Parent=HG01358_ch_T0000307;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000307;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9334675	9340363	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_229;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;gene_id=HG01358_ch_G0000114;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000114;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9334675	9340363	1000	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG01358_ch_T0000308;gene_id=HG01358_ch_G0000114;Parent=HG01358_ch_G0000114;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000308;Name=FAM197Y2
HG01358_chrY	CAT	exon	9334675	9334734	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG01358_ch_T0000308;gene_id=HG01358_ch_G0000114;Parent=HG01358_ch_T0000308;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000308:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9334735	9338283	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG01358_ch_T0000308;gene_id=HG01358_ch_G0000114;Parent=HG01358_ch_T0000308;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000308:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9338284	9338442	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG01358_ch_T0000308;gene_id=HG01358_ch_G0000114;Parent=HG01358_ch_T0000308;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000308:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9338443	9339940	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG01358_ch_T0000308;gene_id=HG01358_ch_G0000114;Parent=HG01358_ch_T0000308;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000308:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9339941	9340086	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG01358_ch_T0000308;gene_id=HG01358_ch_G0000114;Parent=HG01358_ch_T0000308;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000308:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9340087	9340172	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG01358_ch_T0000308;gene_id=HG01358_ch_G0000114;Parent=HG01358_ch_T0000308;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000308:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9340173	9340363	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG01358_ch_T0000308;gene_id=HG01358_ch_G0000114;Parent=HG01358_ch_T0000308;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000308:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9342887	9345683	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_214;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;gene_id=HG01358_ch_G0000115;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01358_ch_G0000115;Name=TSPY1
HG01358_chrY	CAT	transcript	9342887	9345683	100	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_G0000115;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG01358_ch_T0000309;Name=TSPY1
HG01358_chrY	CAT	exon	9342887	9343418	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000309:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9342933	9343418	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000309:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9342933	9342935	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000309;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9343419	9344025	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000309:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344026	9344103	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000309:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344026	9344103	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000309:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344104	9344231	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000309:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344232	9344343	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000309:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344232	9344343	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000309:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344344	9344444	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000309:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344445	9344590	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000309:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344445	9344590	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000309:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344591	9344696	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000309:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344697	9344778	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000309:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344697	9344778	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000309:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344779	9345472	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000309:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9345473	9345683	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000309:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9345473	9345495	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000309:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9345493	9345495	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG01358_ch_T0000309;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000309;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000309;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9342887	9345683	100	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_G0000115;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG01358_ch_T0000310;Name=TSPY1
HG01358_chrY	CAT	exon	9342887	9343418	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000310:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9342933	9343418	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000310:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9342933	9342935	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000310;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9343419	9344025	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000310:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344026	9344103	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000310:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344026	9344103	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000310:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344104	9344231	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000310:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344232	9344343	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000310:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344232	9344343	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000310:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344344	9344444	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000310:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344445	9344590	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000310:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344445	9344590	.	+	2	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000310:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344591	9344685	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000310:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344686	9344778	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000310:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344686	9344748	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000310:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9344746	9344748	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000310;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344779	9345472	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000310:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9345473	9345683	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG01358_ch_T0000310;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000310;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000310:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9342887	9345683	100	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_G0000115;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG01358_ch_T0000311;Name=TSPY1
HG01358_chrY	CAT	exon	9342887	9343418	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000311:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9342933	9343418	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000311:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9342933	9342935	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000311;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9343419	9344025	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000311:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344026	9344103	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000311:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344026	9344103	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000311:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344104	9344231	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000311:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344232	9344343	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000311:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344232	9344343	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000311:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344344	9344451	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000311:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344452	9344590	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000311:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344452	9344590	.	+	2	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000311:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344591	9344696	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000311:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344697	9344778	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000311:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344697	9344748	.	+	1	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000311:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9344746	9344748	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000311;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344779	9345472	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000311:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9345473	9345683	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01358_ch_T0000311;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000311;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000311:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9342887	9345683	100	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_G0000115;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG01358_ch_T0000312;Name=TSPY1
HG01358_chrY	CAT	exon	9342887	9343019	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000312:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9342933	9343019	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000312:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9342933	9342935	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000312;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9343020	9343280	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000312:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9343281	9343418	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000312:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9343281	9343418	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000312:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9343419	9344025	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000312:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344026	9344103	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000312:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344026	9344103	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000312:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344104	9344231	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000312:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344232	9344343	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000312:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344232	9344343	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000312:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344344	9344444	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000312:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344445	9344590	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000312:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344445	9344590	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000312:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344591	9344696	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000312:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344697	9344778	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000312:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9344697	9344778	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000312:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344779	9345472	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000312:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9345473	9345683	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000312:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9345473	9345495	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000312:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9345493	9345495	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000312;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000312;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9342887	9345683	1000	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_G0000115;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=HG01358_ch_T0000313;Name=TSPY1
HG01358_chrY	CAT	exon	9342887	9343418	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000313:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9343419	9344025	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000313:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344026	9344103	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000313:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344104	9344231	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000313:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344232	9344343	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000313:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344344	9344451	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000313:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344452	9344590	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000313:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344591	9344685	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000313:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9344686	9344778	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000313:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9344779	9345472	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000313:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9345473	9345683	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01358_ch_T0000313;gene_id=HG01358_ch_G0000115;Parent=HG01358_ch_T0000313;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000313:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9354951	9360652	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_195;gene_id=HG01358_ch_G0000116;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff,transMap;ID=HG01358_ch_G0000116;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9354951	9360652	1000	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=299.64;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000314;gene_id=HG01358_ch_G0000116;Parent=HG01358_ch_G0000116;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000314;Name=FAM197Y2
HG01358_chrY	CAT	exon	9354951	9355010	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=299.64;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000314;gene_id=HG01358_ch_G0000116;Parent=HG01358_ch_T0000314;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000314:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9355011	9358560	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=299.64;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000314;gene_id=HG01358_ch_G0000116;Parent=HG01358_ch_T0000314;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000314:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9358561	9358719	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=299.64;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000314;gene_id=HG01358_ch_G0000116;Parent=HG01358_ch_T0000314;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000314:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9358720	9360229	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=299.64;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000314;gene_id=HG01358_ch_G0000116;Parent=HG01358_ch_T0000314;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000314:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9360230	9360375	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=299.64;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000314;gene_id=HG01358_ch_G0000116;Parent=HG01358_ch_T0000314;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000314:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9360376	9360461	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=299.64;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000314;gene_id=HG01358_ch_G0000116;Parent=HG01358_ch_T0000314;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000314:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9360462	9360652	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=299.64;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000314;gene_id=HG01358_ch_G0000116;Parent=HG01358_ch_T0000314;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000314:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9363176	9365972	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;gene_id=HG01358_ch_G0000117;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01358_ch_G0000117;Name=TSPY1
HG01358_chrY	CAT	transcript	9363176	9365972	9980	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_G0000117;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG01358_ch_T0000315;Name=TSPY1
HG01358_chrY	CAT	exon	9363176	9363707	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000315:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9363222	9363707	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000315:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9363222	9363224	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000315;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9363708	9364314	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000315:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364315	9364392	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000315:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364315	9364392	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000315:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364393	9364520	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000315:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364521	9364632	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000315:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364521	9364632	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000315:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364633	9364733	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000315:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364734	9364879	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000315:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364734	9364879	.	+	2	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000315:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364880	9364974	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000315:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364975	9365067	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000315:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364975	9365037	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000315:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9365035	9365037	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000315;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9365068	9365761	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000315:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9365762	9365972	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_212.2;transcript_id=HG01358_ch_T0000315;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000315;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000315:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9363176	9365972	9970	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_G0000117;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG01358_ch_T0000316;Name=TSPY1
HG01358_chrY	CAT	exon	9363176	9363308	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000316:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9363222	9363308	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000316:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9363222	9363224	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000316;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9363309	9363569	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000316:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9363570	9363707	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000316:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9363570	9363707	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000316:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9363708	9364314	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000316:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364315	9364392	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000316:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364315	9364392	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000316:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364393	9364520	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000316:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364521	9364632	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000316:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364521	9364632	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000316:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364633	9364733	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000316:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364734	9364879	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000316:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364734	9364879	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000316:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364880	9364985	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000316:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364986	9365067	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000316:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364986	9365067	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000316:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9365068	9365761	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000316:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9365762	9365972	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000316:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9365762	9365784	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000316:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9365782	9365784	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG01358_ch_T0000316;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000316;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000316;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9363176	9365972	9980	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_G0000117;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG01358_ch_T0000317;Name=TSPY1
HG01358_chrY	CAT	exon	9363176	9363707	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000317:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9363222	9363707	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000317:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9363222	9363224	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000317;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9363708	9364314	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000317:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364315	9364392	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000317:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364315	9364392	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000317:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364393	9364520	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000317:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364521	9364632	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000317:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364521	9364632	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000317:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364633	9364733	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000317:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364734	9364879	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000317:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364734	9364879	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000317:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364880	9364985	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000317:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364986	9365067	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000317:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364986	9365067	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000317:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9365068	9365761	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000317:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9365762	9365972	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000317:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9365762	9365784	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000317:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9365782	9365784	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_212.1;transcript_id=HG01358_ch_T0000317;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000317;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000317;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9363176	9365972	9980	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_G0000117;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG01358_ch_T0000318;Name=TSPY1
HG01358_chrY	CAT	exon	9363176	9363707	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9363222	9363707	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9363222	9363224	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000318;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9363708	9364314	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364315	9364392	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364315	9364392	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364393	9364520	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364521	9364632	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364521	9364632	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364633	9364740	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364741	9364879	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364741	9364879	.	+	2	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364880	9364985	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364986	9365067	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9364986	9365037	.	+	1	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9365035	9365037	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000318;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9365068	9365761	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9365762	9365972	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_212.3;transcript_id=HG01358_ch_T0000318;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000318;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000318:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9363176	9365972	1000	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_G0000117;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=HG01358_ch_T0000319;Name=TSPY1
HG01358_chrY	CAT	exon	9363176	9363707	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000319:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9363708	9364314	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000319:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364315	9364392	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000319:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364393	9364520	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000319:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364521	9364632	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000319:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364633	9364740	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000319:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364741	9364879	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000319:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9364880	9364974	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000319:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9364975	9365067	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000319:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9365068	9365761	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000319:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9365762	9365972	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_212.4;transcript_id=HG01358_ch_T0000319;gene_id=HG01358_ch_G0000117;Parent=HG01358_ch_T0000319;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000319:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9375243	9380844	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_201;alternative_source_transcripts=hg002_chrY_paternal_197.1;gene_id=HG01358_ch_G0000118;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000118;Name=FAM197Y3
HG01358_chrY	CAT	transcript	9375243	9380844	1000	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000320;gene_id=HG01358_ch_G0000118;Parent=HG01358_ch_G0000118;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000320;Name=FAM197Y3
HG01358_chrY	CAT	exon	9375243	9375302	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000320;gene_id=HG01358_ch_G0000118;Parent=HG01358_ch_T0000320;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000320:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9375303	9378853	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000320;gene_id=HG01358_ch_G0000118;Parent=HG01358_ch_T0000320;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000320:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9378854	9379012	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000320;gene_id=HG01358_ch_G0000118;Parent=HG01358_ch_T0000320;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000320:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9379013	9380510	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000320;gene_id=HG01358_ch_G0000118;Parent=HG01358_ch_T0000320;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000320:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9380511	9380656	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000320;gene_id=HG01358_ch_G0000118;Parent=HG01358_ch_T0000320;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000320:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9380657	9380742	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000320;gene_id=HG01358_ch_G0000118;Parent=HG01358_ch_T0000320;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000320:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9380743	9380844	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01358_ch_T0000320;gene_id=HG01358_ch_G0000118;Parent=HG01358_ch_T0000320;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000320:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9383458	9386254	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;gene_id=HG01358_ch_G0000119;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01358_ch_G0000119;Name=TSPY1
HG01358_chrY	CAT	transcript	9383458	9386254	10000	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_G0000119;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01358_ch_T0000321;Name=TSPY1
HG01358_chrY	CAT	exon	9383458	9383989	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000321:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9383504	9383989	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000321:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9383504	9383506	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000321;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9383990	9384596	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000321:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384597	9384674	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000321:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9384597	9384674	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000321:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384675	9384802	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000321:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384803	9384914	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000321:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9384803	9384914	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000321:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384915	9385015	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000321:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385016	9385161	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000321:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9385016	9385161	.	+	2	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000321:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385162	9385256	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000321:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385257	9385349	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000321:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9385257	9385319	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000321:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9385317	9385319	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000321;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385350	9386043	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000321:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9386044	9386254	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_214.1;transcript_id=HG01358_ch_T0000321;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000321;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000321:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9383458	9386254	10000	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_G0000119;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01358_ch_T0000322;Name=TSPY1
HG01358_chrY	CAT	exon	9383458	9383590	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9383504	9383590	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9383504	9383506	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000322;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9383591	9383851	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9383852	9383989	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9383852	9383989	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9383990	9384596	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384597	9384674	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9384597	9384674	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384675	9384802	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384803	9384914	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9384803	9384914	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384915	9385015	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385016	9385161	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9385016	9385161	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385162	9385267	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385268	9385349	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000322:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9385268	9385349	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000322:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385350	9386043	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000322:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9386044	9386254	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000322:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9386044	9386066	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000322:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9386064	9386066	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_214.2;transcript_id=HG01358_ch_T0000322;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000322;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000322;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9383458	9386254	10000	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_G0000119;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01358_ch_T0000323;Name=TSPY1
HG01358_chrY	CAT	exon	9383458	9383989	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000323:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9383504	9383989	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000323:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9383504	9383506	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000323;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9383990	9384596	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000323:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384597	9384674	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000323:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9384597	9384674	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000323:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384675	9384802	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000323:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384803	9384914	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000323:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9384803	9384914	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000323:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384915	9385015	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000323:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385016	9385161	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000323:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9385016	9385161	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000323:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385162	9385267	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000323:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385268	9385349	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000323:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9385268	9385349	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000323:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385350	9386043	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000323:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9386044	9386254	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000323:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9386044	9386066	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000323:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9386064	9386066	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_214.3;transcript_id=HG01358_ch_T0000323;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000323;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000323;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9383458	9386254	10000	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_G0000119;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01358_ch_T0000324;Name=TSPY1
HG01358_chrY	CAT	exon	9383458	9383989	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9383504	9383989	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9383504	9383506	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000324;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9383990	9384596	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384597	9384674	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9384597	9384674	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384675	9384802	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384803	9384914	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9384803	9384914	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384915	9385022	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385023	9385161	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9385023	9385161	.	+	2	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385162	9385267	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385268	9385349	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9385268	9385319	.	+	1	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9385317	9385319	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000324;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385350	9386043	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9386044	9386254	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_214.4;transcript_id=HG01358_ch_T0000324;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000324;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000324:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9383458	9386254	1000	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_G0000119;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=HG01358_ch_T0000325;Name=TSPY1
HG01358_chrY	CAT	exon	9383458	9383989	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000325:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9383990	9384596	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000325:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384597	9384674	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000325:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384675	9384802	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000325:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9384803	9384914	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000325:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9384915	9385022	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000325:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385023	9385161	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000325:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385162	9385256	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000325:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9385257	9385349	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000325:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9385350	9386043	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000325:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9386044	9386254	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_214.5;transcript_id=HG01358_ch_T0000325;gene_id=HG01358_ch_G0000119;Parent=HG01358_ch_T0000325;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000325:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9403750	9406547	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_218;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;gene_id=HG01358_ch_G0000120;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01358_ch_G0000120;Name=TSPY10
HG01358_chrY	CAT	transcript	9403750	9406547	100	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_G0000120;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG01358_ch_T0000326;Name=TSPY10
HG01358_chrY	CAT	exon	9403750	9404281	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000326:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9403796	9404281	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000326:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9403796	9403798	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000326;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9404282	9404888	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000326:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9404889	9404966	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000326:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9404889	9404966	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000326:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9404967	9405094	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000326:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405095	9405206	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000326:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405095	9405206	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000326:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405207	9405307	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000326:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405308	9405453	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000326:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405308	9405453	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000326:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405454	9405559	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000326:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405560	9405641	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000326:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405560	9405641	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000326:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405642	9406335	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000326:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9406336	9406547	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000326:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9406336	9406358	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000326:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9406356	9406358	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG01358_ch_T0000326;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000326;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000326;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9403750	9406547	100	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_G0000120;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG01358_ch_T0000327;Name=TSPY10
HG01358_chrY	CAT	exon	9403750	9404281	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000327:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9403796	9404281	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000327:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9403796	9403798	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000327;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9404282	9404888	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000327:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9404889	9404966	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000327:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9404889	9404966	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000327:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9404967	9405094	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000327:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405095	9405206	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000327:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405095	9405206	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000327:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405207	9405307	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000327:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405308	9405453	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000327:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405308	9405453	.	+	2	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000327:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405454	9405548	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000327:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405549	9405641	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000327:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405549	9405611	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000327:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9405609	9405611	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000327;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405642	9406335	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000327:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9406336	9406547	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG01358_ch_T0000327;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000327;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000327:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9403750	9406547	100	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_G0000120;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG01358_ch_T0000328;Name=TSPY10
HG01358_chrY	CAT	exon	9403750	9404281	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000328:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9403796	9404281	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000328:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9403796	9403798	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000328;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9404282	9404888	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000328:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9404889	9404966	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000328:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9404889	9404966	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000328:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9404967	9405094	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000328:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405095	9405206	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000328:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405095	9405206	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000328:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405207	9405314	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000328:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405315	9405453	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000328:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405315	9405453	.	+	2	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000328:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405454	9405559	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000328:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405560	9405641	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000328:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9405560	9405611	.	+	1	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000328:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9405609	9405611	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000328;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405642	9406335	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000328:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9406336	9406547	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG01358_ch_T0000328;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000328;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000328:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9403750	9406547	1000	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_G0000120;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=HG01358_ch_T0000329;Name=TSPY10
HG01358_chrY	CAT	exon	9403750	9404281	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000329:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9404282	9404888	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000329:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9404889	9404966	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000329:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9404967	9405094	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000329:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405095	9405206	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000329:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405207	9405314	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000329:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405315	9405453	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000329:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405454	9405548	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000329:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9405549	9405641	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000329:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9405642	9406335	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000329:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9406336	9406547	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG01358_ch_T0000329;gene_id=HG01358_ch_G0000120;Parent=HG01358_ch_T0000329;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000329:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9415852	9421540	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_235;gene_id=HG01358_ch_G0000121;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000121;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9415852	9421540	1000	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000330;gene_id=HG01358_ch_G0000121;Parent=HG01358_ch_G0000121;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000330;Name=FAM197Y2
HG01358_chrY	CAT	exon	9415852	9415911	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000330;gene_id=HG01358_ch_G0000121;Parent=HG01358_ch_T0000330;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000330:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9415912	9419462	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000330;gene_id=HG01358_ch_G0000121;Parent=HG01358_ch_T0000330;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000330:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9419463	9419621	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000330;gene_id=HG01358_ch_G0000121;Parent=HG01358_ch_T0000330;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000330:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9419622	9421117	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000330;gene_id=HG01358_ch_G0000121;Parent=HG01358_ch_T0000330;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000330:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9421118	9421263	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000330;gene_id=HG01358_ch_G0000121;Parent=HG01358_ch_T0000330;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000330:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9421264	9421349	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000330;gene_id=HG01358_ch_G0000121;Parent=HG01358_ch_T0000330;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000330:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9421350	9421540	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01358_ch_T0000330;gene_id=HG01358_ch_G0000121;Parent=HG01358_ch_T0000330;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000330:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9424065	9426861	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;gene_id=HG01358_ch_G0000122;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01358_ch_G0000122;Name=TSPY1
HG01358_chrY	CAT	transcript	9424065	9426861	100	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_G0000122;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01358_ch_T0000331;Name=TSPY1
HG01358_chrY	CAT	exon	9424065	9424596	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000331:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9424111	9424596	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000331:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9424111	9424113	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000331;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9424597	9425203	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000331:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425204	9425281	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000331:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425204	9425281	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000331:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425282	9425409	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000331:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425410	9425521	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000331:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425410	9425521	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000331:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425522	9425622	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000331:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425623	9425768	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000331:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425623	9425768	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000331:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425769	9425874	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000331:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425875	9425956	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000331:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425875	9425956	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000331:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425957	9426650	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000331:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9426651	9426861	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000331:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9426651	9426673	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000331:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9426671	9426673	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG01358_ch_T0000331;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000331;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9424065	9426861	100	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_G0000122;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01358_ch_T0000332;Name=TSPY1
HG01358_chrY	CAT	exon	9424065	9424596	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9424111	9424596	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9424111	9424113	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000332;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9424597	9425203	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425204	9425281	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425204	9425281	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425282	9425409	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425410	9425521	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425410	9425521	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425522	9425622	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425623	9425768	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425623	9425768	.	+	2	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425769	9425863	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425864	9425956	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425864	9425926	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9425924	9425926	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000332;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425957	9426650	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9426651	9426861	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG01358_ch_T0000332;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000332:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9424065	9426861	100	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_G0000122;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01358_ch_T0000333;Name=TSPY1
HG01358_chrY	CAT	exon	9424065	9424596	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9424111	9424596	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9424111	9424113	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000333;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9424597	9425203	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425204	9425281	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425204	9425281	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425282	9425409	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425410	9425521	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425410	9425521	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425522	9425629	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425630	9425768	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425630	9425768	.	+	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425769	9425874	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425875	9425956	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425875	9425926	.	+	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9425924	9425926	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000333;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425957	9426650	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9426651	9426861	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG01358_ch_T0000333;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000333:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9424065	9426861	100	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_G0000122;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01358_ch_T0000334;Name=TSPY1
HG01358_chrY	CAT	exon	9424065	9424197	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9424111	9424197	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9424111	9424113	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000334;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9424198	9424458	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9424459	9424596	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9424459	9424596	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9424597	9425203	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425204	9425281	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425204	9425281	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425282	9425409	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425410	9425521	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425410	9425521	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425522	9425622	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425623	9425768	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425623	9425768	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425769	9425874	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425875	9425956	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000334:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9425875	9425956	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000334:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425957	9426650	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000334:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9426651	9426861	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000334:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9426651	9426673	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000334:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9426671	9426673	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01358_ch_T0000334;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000334;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9424065	9426861	1000	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_G0000122;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=HG01358_ch_T0000335;Name=TSPY1
HG01358_chrY	CAT	exon	9424065	9424596	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9424597	9425203	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425204	9425281	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425282	9425409	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425410	9425521	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425522	9425629	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425630	9425768	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425769	9425863	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9425864	9425956	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9425957	9426650	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9426651	9426861	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG01358_ch_T0000335;gene_id=HG01358_ch_G0000122;Parent=HG01358_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000335:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9436154	9441840	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_221;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;gene_id=HG01358_ch_G0000123;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01358_ch_G0000123;Name=FAM197Y2
HG01358_chrY	CAT	transcript	9436154	9441840	1000	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG01358_ch_T0000336;gene_id=HG01358_ch_G0000123;Parent=HG01358_ch_G0000123;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=HG01358_ch_T0000336;Name=FAM197Y2
HG01358_chrY	CAT	exon	9436154	9436213	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG01358_ch_T0000336;gene_id=HG01358_ch_G0000123;Parent=HG01358_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000336:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9436214	9439762	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG01358_ch_T0000336;gene_id=HG01358_ch_G0000123;Parent=HG01358_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000336:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9439763	9439921	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG01358_ch_T0000336;gene_id=HG01358_ch_G0000123;Parent=HG01358_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000336:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9439922	9441417	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG01358_ch_T0000336;gene_id=HG01358_ch_G0000123;Parent=HG01358_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000336:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9441418	9441563	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG01358_ch_T0000336;gene_id=HG01358_ch_G0000123;Parent=HG01358_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000336:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9441564	9441649	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG01358_ch_T0000336;gene_id=HG01358_ch_G0000123;Parent=HG01358_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG01358_ch_T0000336:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9441650	9441840	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG01358_ch_T0000336;gene_id=HG01358_ch_G0000123;Parent=HG01358_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG01358_ch_T0000336:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9444364	9447178	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_220.2;gene_id=HG01358_ch_G0000124;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG01358_ch_G0000124;Name=TSPY1
HG01358_chrY	CAT	transcript	9444364	9447178	9970	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_G0000124;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01358_ch_T0000337;Name=TSPY1
HG01358_chrY	CAT	exon	9444364	9444496	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000337:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9444410	9444496	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000337:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9444410	9444412	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000337;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9444497	9444775	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000337:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9444776	9444913	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000337:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9444776	9444913	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000337:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9444914	9445520	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000337:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445521	9445598	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000337:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9445521	9445598	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000337:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9445599	9445726	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000337:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445727	9445838	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000337:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9445727	9445838	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000337:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9445839	9445939	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000337:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445940	9446085	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000337:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9445940	9446085	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000337:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9446086	9446191	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000337:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9446192	9446273	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000337:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9446192	9446273	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000337:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9446274	9446967	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000337:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9446968	9447178	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000337:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9446968	9446990	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000337:6;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9446988	9446990	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000337;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000337;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9444364	9447178	9880	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_G0000124;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01358_ch_T0000338;Name=TSPY1
HG01358_chrY	CAT	exon	9444364	9444913	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000338:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9444410	9444913	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000338:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9444410	9444412	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01358_ch_T0000338;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9444914	9445520	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000338:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445521	9445598	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000338:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9445521	9445598	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000338:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9445599	9445726	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000338:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445727	9445838	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000338:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9445727	9445838	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000338:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9445839	9445946	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000338:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445947	9446085	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000338:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9445947	9446085	.	+	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000338:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9446086	9446191	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000338:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9446192	9446273	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000338:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9446192	9446243	.	+	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01358_ch_T0000338:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9446241	9446243	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01358_ch_T0000338;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9446274	9446967	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01358_ch_T0000338:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9446968	9447178	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.514;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000338;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01358_ch_T0000338:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9444364	9447178	1000	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_G0000124;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=HG01358_ch_T0000339;Name=TSPY1
HG01358_chrY	CAT	exon	9444364	9444913	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000339:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9444914	9445520	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000339:0;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445521	9445598	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000339:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9445599	9445726	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000339:1;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445727	9445838	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000339:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9445839	9445946	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000339:2;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9445947	9446085	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000339:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9446086	9446180	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000339:3;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9446181	9446273	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000339:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9446274	9446967	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01358_ch_T0000339:4;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9446968	9447178	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000339;gene_id=HG01358_ch_G0000124;Parent=HG01358_ch_T0000339;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01358_ch_T0000339:5;Name=TSPY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9456460	9462048	.	-	.	source_gene_common_name=FAM197Y7;source_gene=hg002_chrY_paternal_203;gene_id=HG01358_ch_G0000125;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG01358_ch_G0000125;Name=FAM197Y7
HG01358_chrY	CAT	transcript	9456460	9462048	1000	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01358_ch_T0000340;gene_id=HG01358_ch_G0000125;Parent=HG01358_ch_G0000125;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=HG01358_ch_T0000340;Name=FAM197Y7
HG01358_chrY	CAT	exon	9456460	9456519	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01358_ch_T0000340;gene_id=HG01358_ch_G0000125;Parent=HG01358_ch_T0000340;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG01358_ch_T0000340:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9456520	9460068	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01358_ch_T0000340;gene_id=HG01358_ch_G0000125;Parent=HG01358_ch_T0000340;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG01358_ch_T0000340:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9460069	9460227	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01358_ch_T0000340;gene_id=HG01358_ch_G0000125;Parent=HG01358_ch_T0000340;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG01358_ch_T0000340:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9460228	9461714	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01358_ch_T0000340;gene_id=HG01358_ch_G0000125;Parent=HG01358_ch_T0000340;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG01358_ch_T0000340:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9461715	9461860	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01358_ch_T0000340;gene_id=HG01358_ch_G0000125;Parent=HG01358_ch_T0000340;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG01358_ch_T0000340:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9461861	9461946	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01358_ch_T0000340;gene_id=HG01358_ch_G0000125;Parent=HG01358_ch_T0000340;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG01358_ch_T0000340:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9461947	9462048	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01358_ch_T0000340;gene_id=HG01358_ch_G0000125;Parent=HG01358_ch_T0000340;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG01358_ch_T0000340:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9464661	9467475	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_222.3;gene_id=HG01358_ch_G0000126;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=augTM,transMap;ID=HG01358_ch_G0000126;Name=TSPY10
HG01358_chrY	CAT	transcript	9464661	9467475	9890	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_G0000126;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG01358_ch_T0000341;Name=TSPY10
HG01358_chrY	CAT	exon	9464661	9465210	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000341:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9464707	9465210	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000341:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9464707	9464709	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000341;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9465211	9465817	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000341:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9465818	9465895	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000341:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9465818	9465895	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000341:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9465896	9466023	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000341:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9466024	9466135	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000341:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9466024	9466135	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000341:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9466136	9466243	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000341:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9466244	9466382	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000341:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9466244	9466382	.	+	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000341:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9466383	9466488	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000341:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9466489	9466570	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000341:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9466489	9466540	.	+	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000341:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9466538	9466540	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000341;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9466571	9467264	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000341:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9467265	9467475	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=297.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000341;gene_id=HG01358_ch_G0000126;Parent=HG01358_ch_T0000341;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000341:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9476733	9482321	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_211;alternative_source_transcripts=hg002_chrY_paternal_223.1;gene_id=HG01358_ch_G0000127;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000127;Name=FAM197Y3
HG01358_chrY	CAT	transcript	9476733	9482321	1000	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG01358_ch_T0000342;gene_id=HG01358_ch_G0000127;Parent=HG01358_ch_G0000127;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000342;Name=FAM197Y3
HG01358_chrY	CAT	exon	9476733	9476792	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG01358_ch_T0000342;gene_id=HG01358_ch_G0000127;Parent=HG01358_ch_T0000342;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000342:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9476793	9480341	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG01358_ch_T0000342;gene_id=HG01358_ch_G0000127;Parent=HG01358_ch_T0000342;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000342:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9480342	9480500	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG01358_ch_T0000342;gene_id=HG01358_ch_G0000127;Parent=HG01358_ch_T0000342;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000342:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9480501	9481987	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG01358_ch_T0000342;gene_id=HG01358_ch_G0000127;Parent=HG01358_ch_T0000342;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000342:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9481988	9482133	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG01358_ch_T0000342;gene_id=HG01358_ch_G0000127;Parent=HG01358_ch_T0000342;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000342:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9482134	9482219	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG01358_ch_T0000342;gene_id=HG01358_ch_G0000127;Parent=HG01358_ch_T0000342;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000342:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9482220	9482321	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG01358_ch_T0000342;gene_id=HG01358_ch_G0000127;Parent=HG01358_ch_T0000342;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000342:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9484934	9487748	.	+	.	source_gene_common_name=TSPY10P;source_gene=hg002_chrY_paternal_236;gene_id=HG01358_ch_G0000128;gene_biotype=pseudogene;gene_name=TSPY10P;gene_sources=augTM,transMap;ID=HG01358_ch_G0000128;Name=TSPY10P
HG01358_chrY	CAT	transcript	9484934	9487748	1000	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_G0000128;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG01358_ch_T0000343;Name=TSPY10P
HG01358_chrY	CAT	exon	9484934	9485483	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000343:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9484980	9485483	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01358_ch_T0000343:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9484980	9484982	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG01358_ch_T0000343;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9485484	9486090	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000343:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9486091	9486168	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000343:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9486091	9486168	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01358_ch_T0000343:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9486169	9486296	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000343:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9486297	9486408	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000343:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9486297	9486408	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01358_ch_T0000343:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9486409	9486509	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000343:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9486510	9486655	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000343:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9486510	9486544	.	+	2	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01358_ch_T0000343:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9486656	9486761	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000343:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9486762	9486843	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000343:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9486844	9487537	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000343:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9487538	9487748	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000343;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000343;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000343:5;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9484934	9487748	1000	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_G0000128;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG01358_ch_T0000344;Name=TSPY10P
HG01358_chrY	CAT	exon	9484934	9485483	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000344:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9484980	9485483	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01358_ch_T0000344:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9484980	9484982	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG01358_ch_T0000344;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9485484	9486090	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000344:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9486091	9486168	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000344:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9486091	9486168	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01358_ch_T0000344:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9486169	9486296	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000344:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9486297	9486408	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000344:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9486297	9486408	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01358_ch_T0000344:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9486409	9486509	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000344:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9486510	9486655	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000344:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9486510	9486544	.	+	2	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01358_ch_T0000344:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9486656	9486750	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000344:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9486751	9486843	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000344:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9486844	9487537	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01358_ch_T0000344:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9487538	9487748	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.573;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000344;gene_id=HG01358_ch_G0000128;Parent=HG01358_ch_T0000344;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01358_ch_T0000344:5;Name=TSPY10P;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9497018	9502627	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_187;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;gene_id=HG01358_ch_G0000129;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01358_ch_G0000129;Name=FAM197Y3
HG01358_chrY	CAT	transcript	9497018	9502627	1000	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;transcript_id=HG01358_ch_T0000345;gene_id=HG01358_ch_G0000129;Parent=HG01358_ch_G0000129;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000345;Name=FAM197Y3
HG01358_chrY	CAT	exon	9497018	9497077	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;transcript_id=HG01358_ch_T0000345;gene_id=HG01358_ch_G0000129;Parent=HG01358_ch_T0000345;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000345:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9497078	9500628	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;transcript_id=HG01358_ch_T0000345;gene_id=HG01358_ch_G0000129;Parent=HG01358_ch_T0000345;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000345:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9500629	9500787	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;transcript_id=HG01358_ch_T0000345;gene_id=HG01358_ch_G0000129;Parent=HG01358_ch_T0000345;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000345:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9500788	9502293	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;transcript_id=HG01358_ch_T0000345;gene_id=HG01358_ch_G0000129;Parent=HG01358_ch_T0000345;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000345:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9502294	9502439	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;transcript_id=HG01358_ch_T0000345;gene_id=HG01358_ch_G0000129;Parent=HG01358_ch_T0000345;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000345:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9502440	9502525	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;transcript_id=HG01358_ch_T0000345;gene_id=HG01358_ch_G0000129;Parent=HG01358_ch_T0000345;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000345:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9502526	9502627	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_225.1;transcript_id=HG01358_ch_T0000345;gene_id=HG01358_ch_G0000129;Parent=HG01358_ch_T0000345;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000345:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9505236	9508032	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_212;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;gene_id=HG01358_ch_G0000130;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01358_ch_G0000130;Name=TSPY10
HG01358_chrY	CAT	transcript	9505236	9508032	100	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_G0000130;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01358_ch_T0000346;Name=TSPY10
HG01358_chrY	CAT	exon	9505236	9505767	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000346:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9505282	9505767	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000346:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9505282	9505284	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000346;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9505768	9506374	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000346:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506375	9506452	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000346:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506375	9506452	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000346:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506453	9506580	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000346:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506581	9506692	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000346:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506581	9506692	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000346:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506693	9506793	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000346:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506794	9506939	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000346:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506794	9506939	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000346:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506940	9507045	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000346:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9507046	9507127	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000346:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9507046	9507127	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000346:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9507128	9507821	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000346:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9507822	9508032	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000346:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9507822	9507844	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000346:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9507842	9507844	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_226.1;transcript_id=HG01358_ch_T0000346;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000346;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9505236	9508032	100	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_G0000130;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01358_ch_T0000347;Name=TSPY10
HG01358_chrY	CAT	exon	9505236	9505767	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000347:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9505282	9505767	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000347:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9505282	9505284	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000347;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9505768	9506374	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000347:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506375	9506452	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000347:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506375	9506452	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000347:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506453	9506580	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000347:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506581	9506692	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000347:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506581	9506692	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000347:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506693	9506793	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000347:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506794	9506939	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000347:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506794	9506939	.	+	2	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000347:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506940	9507034	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000347:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9507035	9507127	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000347:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9507035	9507097	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000347:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9507095	9507097	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000347;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9507128	9507821	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000347:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9507822	9508032	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_226.2;transcript_id=HG01358_ch_T0000347;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000347;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000347:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9505236	9508032	100	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_G0000130;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01358_ch_T0000348;Name=TSPY10
HG01358_chrY	CAT	exon	9505236	9505767	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000348:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9505282	9505767	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000348:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9505282	9505284	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01358_ch_T0000348;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9505768	9506374	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000348:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506375	9506452	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000348:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506375	9506452	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000348:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506453	9506580	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000348:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506581	9506692	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000348:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506581	9506692	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000348:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506693	9506800	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000348:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506801	9506939	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000348:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9506801	9506939	.	+	2	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000348:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506940	9507045	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000348:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9507046	9507127	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000348:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9507046	9507097	.	+	1	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01358_ch_T0000348:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9507095	9507097	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01358_ch_T0000348;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9507128	9507821	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01358_ch_T0000348:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9507822	9508032	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_226.3;transcript_id=HG01358_ch_T0000348;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000348;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01358_ch_T0000348:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9505236	9508032	1000	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_G0000130;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=HG01358_ch_T0000349;Name=TSPY10
HG01358_chrY	CAT	exon	9505236	9505767	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000349:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9505768	9506374	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000349:0;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506375	9506452	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000349:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506453	9506580	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000349:1;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506581	9506692	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000349:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506693	9506800	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000349:2;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9506801	9506939	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000349:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9506940	9507034	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000349:3;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9507035	9507127	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000349:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9507128	9507821	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01358_ch_T0000349:4;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9507822	9508032	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_226.4;transcript_id=HG01358_ch_T0000349;gene_id=HG01358_ch_G0000130;Parent=HG01358_ch_T0000349;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01358_ch_T0000349:5;Name=TSPY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9517299	9522903	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_239;gene_id=HG01358_ch_G0000131;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=transMap,transMap_pairwise;ID=HG01358_ch_G0000131;Name=FAM197Y3
HG01358_chrY	CAT	transcript	9517299	9522903	1000	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=299.786;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000350;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_G0000131;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000350;Name=FAM197Y3
HG01358_chrY	CAT	exon	9517299	9517358	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000350;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000350;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000350:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9517359	9520908	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000350;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000350;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000350:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9520909	9521067	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000350;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000350;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000350:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9521068	9522569	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000350;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000350;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000350:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9522570	9522715	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000350;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000350;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000350:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9522716	9522801	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000350;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000350;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000350:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9522802	9522903	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000350;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000350;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000350:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9522570	9522903	1000	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000351;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_G0000131;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=HG01358_ch_T0000351;Name=FAM197Y3
HG01358_chrY	CAT	exon	9522570	9522715	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000351;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000351;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000351:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9522716	9522801	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000351;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000351;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01358_ch_T0000351:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9522802	9522903	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01358_ch_T0000351;gene_id=HG01358_ch_G0000131;Parent=HG01358_ch_T0000351;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01358_ch_T0000351:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9525516	9528328	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_240;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;gene_id=HG01358_ch_G0000132;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000132;Name=TSPY9
HG01358_chrY	CAT	transcript	9525516	9528328	100	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_G0000132;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG01358_ch_T0000352;Name=TSPY9
HG01358_chrY	CAT	exon	9525516	9526065	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000352:0;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9525562	9526065	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000352:0;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9525562	9525564	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG01358_ch_T0000352;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9526066	9526672	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000352:0;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9526673	9526750	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000352:1;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9526673	9526750	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000352:1;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9526751	9526878	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000352:1;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9526879	9526990	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000352:2;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9526879	9526990	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000352:2;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9526991	9527091	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000352:2;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9527092	9527237	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000352:3;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9527092	9527237	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000352:3;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9527238	9527343	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000352:3;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9527344	9527425	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000352:4;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9527344	9527425	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000352:4;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9527426	9528117	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000352:4;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9528118	9528328	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000352:5;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9528118	9528140	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000352:5;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9528138	9528140	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000352;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000352;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG01358_ch_T0000352;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	9525516	9528328	100	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_G0000132;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG01358_ch_T0000353;Name=TSPY9
HG01358_chrY	CAT	exon	9525516	9526065	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000353:0;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9525562	9526065	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000353:0;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9525562	9525564	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG01358_ch_T0000353;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9526066	9526672	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000353:0;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9526673	9526750	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000353:1;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9526673	9526750	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000353:1;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9526751	9526878	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000353:1;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9526879	9526990	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000353:2;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9526879	9526990	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000353:2;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9526991	9527091	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000353:2;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9527092	9527237	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000353:3;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9527092	9527237	.	+	2	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000353:3;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9527238	9527332	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000353:3;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9527333	9527425	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000353:4;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9527333	9527395	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01358_ch_T0000353:4;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9527393	9527395	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG01358_ch_T0000353;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9527426	9528117	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01358_ch_T0000353:4;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9528118	9528328	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000353;gene_id=HG01358_ch_G0000132;Parent=HG01358_ch_T0000353;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01358_ch_T0000353:5;Name=TSPY9;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9608382	9612814	.	-	.	source_gene_common_name=RBMY3AP;source_gene=hg002_chrY_paternal_242;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;gene_id=HG01358_ch_G0000133;gene_biotype=transcribed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG01358_ch_G0000133;Name=RBMY3AP
HG01358_chrY	CAT	transcript	9608382	9612814	1000	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01358_ch_T0000354;gene_id=HG01358_ch_G0000133;Parent=HG01358_ch_G0000133;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=HG01358_ch_T0000354;Name=RBMY3AP
HG01358_chrY	CAT	exon	9608382	9608532	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01358_ch_T0000354;gene_id=HG01358_ch_G0000133;Parent=HG01358_ch_T0000354;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG01358_ch_T0000354:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9608533	9612442	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01358_ch_T0000354;gene_id=HG01358_ch_G0000133;Parent=HG01358_ch_T0000354;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG01358_ch_T0000354:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9612443	9612544	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01358_ch_T0000354;gene_id=HG01358_ch_G0000133;Parent=HG01358_ch_T0000354;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG01358_ch_T0000354:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9612545	9612750	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01358_ch_T0000354;gene_id=HG01358_ch_G0000133;Parent=HG01358_ch_T0000354;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG01358_ch_T0000354:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9612751	9612814	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01358_ch_T0000354;gene_id=HG01358_ch_G0000133;Parent=HG01358_ch_T0000354;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG01358_ch_T0000354:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9688763	9691362	.	+	.	source_gene_common_name=TTTY8;source_gene=hg002_chrY_paternal_245;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;gene_id=HG01358_ch_G0000134;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG01358_ch_G0000134;Name=TTTY8
HG01358_chrY	CAT	transcript	9688763	9691362	1000	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01358_ch_T0000355;gene_id=HG01358_ch_G0000134;Parent=HG01358_ch_G0000134;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=HG01358_ch_T0000355;Name=TTTY8
HG01358_chrY	CAT	exon	9688763	9688898	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01358_ch_T0000355;gene_id=HG01358_ch_G0000134;Parent=HG01358_ch_T0000355;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG01358_ch_T0000355:0;Name=TTTY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9688899	9689375	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01358_ch_T0000355;gene_id=HG01358_ch_G0000134;Parent=HG01358_ch_T0000355;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG01358_ch_T0000355:0;Name=TTTY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9689376	9689580	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01358_ch_T0000355;gene_id=HG01358_ch_G0000134;Parent=HG01358_ch_T0000355;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG01358_ch_T0000355:1;Name=TTTY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9689581	9691172	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01358_ch_T0000355;gene_id=HG01358_ch_G0000134;Parent=HG01358_ch_T0000355;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG01358_ch_T0000355:1;Name=TTTY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9691173	9691362	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01358_ch_T0000355;gene_id=HG01358_ch_G0000134;Parent=HG01358_ch_T0000355;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG01358_ch_T0000355:2;Name=TTTY8;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9704487	9712925	.	-	.	source_gene_common_name=TTTY7B;source_gene=hg002_chrY_paternal_246;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;gene_id=HG01358_ch_G0000135;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG01358_ch_G0000135;Name=TTTY7B
HG01358_chrY	CAT	transcript	9704487	9712925	1000	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_G0000135;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=HG01358_ch_T0000356;Name=TTTY7B
HG01358_chrY	CAT	exon	9704487	9704732	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01358_ch_T0000356:0;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9704733	9706207	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01358_ch_T0000356:0;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9706208	9706321	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01358_ch_T0000356:1;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9706322	9708238	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01358_ch_T0000356:1;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9708239	9708715	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01358_ch_T0000356:2;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9708716	9709403	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01358_ch_T0000356:2;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9709404	9709478	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01358_ch_T0000356:3;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9709479	9711785	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01358_ch_T0000356:3;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9711786	9711947	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01358_ch_T0000356:4;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9711948	9712888	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01358_ch_T0000356:4;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9712889	9712925	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01358_ch_T0000356;gene_id=HG01358_ch_G0000135;Parent=HG01358_ch_T0000356;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01358_ch_T0000356:5;Name=TTTY7B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9715316	9718959	.	-	.	source_gene_common_name=TTTY21B;source_gene=hg002_chrY_paternal_82;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;gene_id=HG01358_ch_G0000136;gene_biotype=lncRNA;gene_name=TTTY21B;gene_sources=liftoff;ID=HG01358_ch_G0000136;Name=TTTY21B
HG01358_chrY	CAT	transcript	9715316	9718959	1000	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG01358_ch_T0000357;gene_id=HG01358_ch_G0000136;Parent=HG01358_ch_G0000136;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=HG01358_ch_T0000357;Name=TTTY21B
HG01358_chrY	CAT	exon	9715316	9715420	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG01358_ch_T0000357;gene_id=HG01358_ch_G0000136;Parent=HG01358_ch_T0000357;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG01358_ch_T0000357:0;Name=TTTY21B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9715421	9718757	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG01358_ch_T0000357;gene_id=HG01358_ch_G0000136;Parent=HG01358_ch_T0000357;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=intron:HG01358_ch_T0000357:0;Name=TTTY21B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9718758	9718959	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG01358_ch_T0000357;gene_id=HG01358_ch_G0000136;Parent=HG01358_ch_T0000357;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG01358_ch_T0000357:1;Name=TTTY21B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9733949	9756139	.	+	.	source_gene_common_name=TTTY2B;source_gene=hg002_chrY_paternal_81;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;gene_id=HG01358_ch_G0000137;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG01358_ch_G0000137;Name=TTTY2B
HG01358_chrY	CAT	transcript	9733949	9756139	1000	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_G0000137;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=HG01358_ch_T0000358;Name=TTTY2B
HG01358_chrY	CAT	exon	9733949	9734153	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01358_ch_T0000358:0;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9734154	9739986	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01358_ch_T0000358:0;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9739987	9740064	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01358_ch_T0000358:1;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9740065	9742540	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01358_ch_T0000358:1;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9742541	9742627	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01358_ch_T0000358:2;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9742628	9750011	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01358_ch_T0000358:2;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9750012	9750160	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01358_ch_T0000358:3;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9750161	9750852	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01358_ch_T0000358:3;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9750853	9751009	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01358_ch_T0000358:4;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9751010	9753839	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01358_ch_T0000358:4;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9753840	9753918	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01358_ch_T0000358:5;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9753919	9754038	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01358_ch_T0000358:5;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9754039	9754236	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01358_ch_T0000358:6;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9754237	9755459	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01358_ch_T0000358:6;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9755460	9756139	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01358_ch_T0000358;gene_id=HG01358_ch_G0000137;Parent=HG01358_ch_T0000358;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01358_ch_T0000358:7;Name=TTTY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9750819	9771982	.	-	.	source_gene_common_name=TTTY1;source_gene=hg002_chrY_paternal_80;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;gene_id=HG01358_ch_G0000138;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG01358_ch_G0000138;Name=TTTY1
HG01358_chrY	CAT	transcript	9750819	9771982	1000	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_G0000138;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=HG01358_ch_T0000359;Name=TTTY1
HG01358_chrY	CAT	exon	9750819	9751076	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01358_ch_T0000359:0;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9751077	9758657	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG01358_ch_T0000359:0;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9758658	9758795	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01358_ch_T0000359:1;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9758796	9761151	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG01358_ch_T0000359:1;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9761152	9761260	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01358_ch_T0000359:2;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9761261	9768123	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG01358_ch_T0000359:2;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9768124	9768283	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01358_ch_T0000359:3;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9768284	9771707	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG01358_ch_T0000359:3;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9771708	9771982	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01358_ch_T0000359;gene_id=HG01358_ch_G0000138;Parent=HG01358_ch_T0000359;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01358_ch_T0000359:4;Name=TTTY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9792453	9795760	.	+	.	source_gene_common_name=LOC107987342;source_gene=hg002_chrY_paternal_79;gene_id=HG01358_ch_G0000139;gene_biotype=lncRNA;gene_name=LOC107987342;gene_sources=liftoff;ID=HG01358_ch_G0000139;Name=LOC107987342
HG01358_chrY	CAT	transcript	9792453	9795760	1000	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=HG01358_ch_T0000360;gene_id=HG01358_ch_G0000139;Parent=HG01358_ch_G0000139;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=HG01358_ch_T0000360;Name=LOC107987342
HG01358_chrY	CAT	exon	9792453	9792631	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=HG01358_ch_T0000360;gene_id=HG01358_ch_G0000139;Parent=HG01358_ch_T0000360;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG01358_ch_T0000360:0;Name=LOC107987342;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9792632	9793007	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=HG01358_ch_T0000360;gene_id=HG01358_ch_G0000139;Parent=HG01358_ch_T0000360;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG01358_ch_T0000360:0;Name=LOC107987342;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9793008	9793080	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=HG01358_ch_T0000360;gene_id=HG01358_ch_G0000139;Parent=HG01358_ch_T0000360;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG01358_ch_T0000360:1;Name=LOC107987342;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9793081	9795611	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=HG01358_ch_T0000360;gene_id=HG01358_ch_G0000139;Parent=HG01358_ch_T0000360;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG01358_ch_T0000360:1;Name=LOC107987342;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9795612	9795760	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=HG01358_ch_T0000360;gene_id=HG01358_ch_G0000139;Parent=HG01358_ch_T0000360;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG01358_ch_T0000360:2;Name=LOC107987342;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9798816	9810908	.	+	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;gene_id=HG01358_ch_G0000140;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG01358_ch_G0000140;Name=TTTY22
HG01358_chrY	CAT	transcript	9798816	9810908	1000	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_G0000140;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=HG01358_ch_T0000361;Name=TTTY22
HG01358_chrY	CAT	exon	9798816	9798970	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01358_ch_T0000361:0;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9798971	9802436	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01358_ch_T0000361:0;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9802437	9802548	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01358_ch_T0000361:1;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9802549	9806973	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01358_ch_T0000361:1;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9806974	9807048	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01358_ch_T0000361:2;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9807049	9807733	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01358_ch_T0000361:2;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9807734	9807772	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01358_ch_T0000361:3;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9807773	9810862	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01358_ch_T0000361:3;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9810863	9810908	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG01358_ch_T0000361;gene_id=HG01358_ch_G0000140;Parent=HG01358_ch_T0000361;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01358_ch_T0000361:4;Name=TTTY22;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9810978	9815180	.	+	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_77;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;gene_id=HG01358_ch_G0000141;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG01358_ch_G0000141;Name=LINC00280
HG01358_chrY	CAT	transcript	9810978	9815180	1000	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01358_ch_T0000362;gene_id=HG01358_ch_G0000141;Parent=HG01358_ch_G0000141;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=HG01358_ch_T0000362;Name=LINC00280
HG01358_chrY	CAT	exon	9810978	9811063	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01358_ch_T0000362;gene_id=HG01358_ch_G0000141;Parent=HG01358_ch_T0000362;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG01358_ch_T0000362:0;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9811064	9813564	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01358_ch_T0000362;gene_id=HG01358_ch_G0000141;Parent=HG01358_ch_T0000362;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG01358_ch_T0000362:0;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9813565	9813707	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01358_ch_T0000362;gene_id=HG01358_ch_G0000141;Parent=HG01358_ch_T0000362;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG01358_ch_T0000362:1;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9813708	9814961	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01358_ch_T0000362;gene_id=HG01358_ch_G0000141;Parent=HG01358_ch_T0000362;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG01358_ch_T0000362:1;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9814962	9815180	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01358_ch_T0000362;gene_id=HG01358_ch_G0000141;Parent=HG01358_ch_T0000362;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG01358_ch_T0000362:2;Name=LINC00280;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9905705	9905852	.	-	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;gene_id=HG01358_ch_G0000142;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=transMap_pairwise;ID=HG01358_ch_G0000142;Name=TSPY2
HG01358_chrY	CAT	transcript	9905705	9905852	10000	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG01358_ch_T0000363;gene_id=HG01358_ch_G0000142;Parent=HG01358_ch_G0000142;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG01358_ch_T0000363;Name=TSPY2
HG01358_chrY	CAT	exon	9905705	9905852	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG01358_ch_T0000363;gene_id=HG01358_ch_G0000142;Parent=HG01358_ch_T0000363;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01358_ch_T0000363:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	9905705	9905806	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG01358_ch_T0000363;gene_id=HG01358_ch_G0000142;Parent=HG01358_ch_T0000363;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01358_ch_T0000363:0;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	9905705	9905707	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG01358_ch_T0000363;gene_id=HG01358_ch_G0000142;Parent=HG01358_ch_T0000363;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG01358_ch_T0000363;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	9905804	9905806	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG01358_ch_T0000363;gene_id=HG01358_ch_G0000142;Parent=HG01358_ch_T0000363;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG01358_ch_T0000363;Name=TSPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	9908465	9909629	.	+	.	source_gene_common_name=TTTY23;source_gene=hg002_chrY_paternal_73;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;gene_id=HG01358_ch_G0000143;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG01358_ch_G0000143;Name=TTTY23
HG01358_chrY	CAT	transcript	9908465	9909629	1000	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01358_ch_T0000364;gene_id=HG01358_ch_G0000143;Parent=HG01358_ch_G0000143;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=HG01358_ch_T0000364;Name=TTTY23
HG01358_chrY	CAT	exon	9908465	9908521	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01358_ch_T0000364;gene_id=HG01358_ch_G0000143;Parent=HG01358_ch_T0000364;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG01358_ch_T0000364:0;Name=TTTY23;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9908522	9908634	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01358_ch_T0000364;gene_id=HG01358_ch_G0000143;Parent=HG01358_ch_T0000364;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG01358_ch_T0000364:0;Name=TTTY23;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9908635	9908780	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01358_ch_T0000364;gene_id=HG01358_ch_G0000143;Parent=HG01358_ch_T0000364;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG01358_ch_T0000364:1;Name=TTTY23;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	9908781	9909320	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01358_ch_T0000364;gene_id=HG01358_ch_G0000143;Parent=HG01358_ch_T0000364;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG01358_ch_T0000364:1;Name=TTTY23;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	9909321	9909629	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01358_ch_T0000364;gene_id=HG01358_ch_G0000143;Parent=HG01358_ch_T0000364;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG01358_ch_T0000364:2;Name=TTTY23;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	11015299	11018313	.	-	.	source_gene_common_name=LOC124904996;source_gene=hg002_chrY_paternal_275;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;gene_id=HG01358_ch_G0000144;gene_biotype=lncRNA;gene_name=LOC124904996;gene_sources=liftoff;ID=HG01358_ch_G0000144;Name=LOC124904996
HG01358_chrY	CAT	transcript	11015299	11018313	1000	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG01358_ch_T0000365;gene_id=HG01358_ch_G0000144;Parent=HG01358_ch_G0000144;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=HG01358_ch_T0000365;Name=LOC124904996
HG01358_chrY	CAT	exon	11015299	11016564	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG01358_ch_T0000365;gene_id=HG01358_ch_G0000144;Parent=HG01358_ch_T0000365;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG01358_ch_T0000365:0;Name=LOC124904996;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	11016565	11017891	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG01358_ch_T0000365;gene_id=HG01358_ch_G0000144;Parent=HG01358_ch_T0000365;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=intron:HG01358_ch_T0000365:0;Name=LOC124904996;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	11017892	11018313	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG01358_ch_T0000365;gene_id=HG01358_ch_G0000144;Parent=HG01358_ch_T0000365;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG01358_ch_T0000365:1;Name=LOC124904996;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	11100864	11109221	.	-	.	source_gene_common_name=LOC105379273;source_gene=hg002_chrY_paternal_284;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;gene_id=HG01358_ch_G0000145;gene_biotype=lncRNA;gene_name=LOC105379273;gene_sources=liftoff;ID=HG01358_ch_G0000145;Name=LOC105379273
HG01358_chrY	CAT	transcript	11100864	11109221	1000	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01358_ch_T0000366;gene_id=HG01358_ch_G0000145;Parent=HG01358_ch_G0000145;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=HG01358_ch_T0000366;Name=LOC105379273
HG01358_chrY	CAT	exon	11100864	11100905	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01358_ch_T0000366;gene_id=HG01358_ch_G0000145;Parent=HG01358_ch_T0000366;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG01358_ch_T0000366:0;Name=LOC105379273;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	11100906	11106967	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01358_ch_T0000366;gene_id=HG01358_ch_G0000145;Parent=HG01358_ch_T0000366;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG01358_ch_T0000366:0;Name=LOC105379273;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	11106968	11107026	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01358_ch_T0000366;gene_id=HG01358_ch_G0000145;Parent=HG01358_ch_T0000366;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG01358_ch_T0000366:1;Name=LOC105379273;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	11107027	11109161	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01358_ch_T0000366;gene_id=HG01358_ch_G0000145;Parent=HG01358_ch_T0000366;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG01358_ch_T0000366:1;Name=LOC105379273;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	11109162	11109221	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01358_ch_T0000366;gene_id=HG01358_ch_G0000145;Parent=HG01358_ch_T0000366;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG01358_ch_T0000366:2;Name=LOC105379273;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13001369	13008983	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;gene_id=HG01358_ch_G0000146;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=liftoff;ID=HG01358_ch_G0000146;Name=LOC112268312
HG01358_chrY	CAT	transcript	13001369	13007920	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000367;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_G0000146;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01358_ch_T0000367;Name=LOC112268312
HG01358_chrY	CAT	exon	13001369	13001458	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000367;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000367;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000367:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13001459	13001644	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000367;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000367;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000367:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13001645	13001806	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000367;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000367;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000367:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13001807	13007784	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000367;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000367;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000367:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13007785	13007920	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000367;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000367;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000367:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13001369	13008983	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000368;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_G0000146;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01358_ch_T0000368;Name=LOC112268312
HG01358_chrY	CAT	exon	13001369	13001458	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000368;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000368;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000368:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13001459	13001644	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000368;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000368;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000368:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13001645	13001806	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000368;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000368;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000368:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13001807	13007784	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000368;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000368;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000368:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13007785	13008983	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000368;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000368;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000368:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13001492	13008983	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000369;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_G0000146;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01358_ch_T0000369;Name=LOC112268312
HG01358_chrY	CAT	exon	13001492	13001510	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000369;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000369:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13001511	13001644	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000369;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000369:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13001645	13001806	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000369;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000369:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13001807	13007784	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000369;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000369:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13007785	13008983	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG01358_ch_T0000369;gene_id=HG01358_ch_G0000146;Parent=HG01358_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000369:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13044169	13053103	.	-	.	source_gene_common_name=LOC107987343;source_gene=hg002_chrY_paternal_305;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;gene_id=HG01358_ch_G0000147;gene_biotype=lncRNA;gene_name=LOC107987343;gene_sources=liftoff;ID=HG01358_ch_G0000147;Name=LOC107987343
HG01358_chrY	CAT	transcript	13044169	13053103	1000	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01358_ch_T0000370;gene_id=HG01358_ch_G0000147;Parent=HG01358_ch_G0000147;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=HG01358_ch_T0000370;Name=LOC107987343
HG01358_chrY	CAT	exon	13044169	13045561	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01358_ch_T0000370;gene_id=HG01358_ch_G0000147;Parent=HG01358_ch_T0000370;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG01358_ch_T0000370:0;Name=LOC107987343;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13045562	13048123	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01358_ch_T0000370;gene_id=HG01358_ch_G0000147;Parent=HG01358_ch_T0000370;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG01358_ch_T0000370:0;Name=LOC107987343;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13048124	13048250	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01358_ch_T0000370;gene_id=HG01358_ch_G0000147;Parent=HG01358_ch_T0000370;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG01358_ch_T0000370:1;Name=LOC107987343;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13048251	13051207	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01358_ch_T0000370;gene_id=HG01358_ch_G0000147;Parent=HG01358_ch_T0000370;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG01358_ch_T0000370:1;Name=LOC107987343;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13051208	13053103	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01358_ch_T0000370;gene_id=HG01358_ch_G0000147;Parent=HG01358_ch_T0000370;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG01358_ch_T0000370:2;Name=LOC107987343;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13095707	13111181	.	-	.	source_gene_common_name=GYG2P1;source_gene=hg002_chrY_paternal_306;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;gene_id=HG01358_ch_G0000148;gene_biotype=transcribed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG01358_ch_G0000148;Name=GYG2P1
HG01358_chrY	CAT	transcript	13095707	13111181	1000	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_G0000148;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=HG01358_ch_T0000371;Name=GYG2P1
HG01358_chrY	CAT	exon	13095707	13096091	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01358_ch_T0000371:0;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13096092	13096386	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG01358_ch_T0000371:0;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13096387	13096528	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01358_ch_T0000371:1;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13096529	13096783	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG01358_ch_T0000371:1;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13096784	13096900	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01358_ch_T0000371:2;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13096901	13109906	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG01358_ch_T0000371:2;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13109907	13110045	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01358_ch_T0000371:3;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13110046	13111140	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG01358_ch_T0000371:3;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13111141	13111181	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01358_ch_T0000371;gene_id=HG01358_ch_G0000148;Parent=HG01358_ch_T0000371;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01358_ch_T0000371:4;Name=GYG2P1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13351101	13353269	.	-	.	source_gene_common_name=LOC112268311;source_gene=hg002_chrY_paternal_311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;gene_id=HG01358_ch_G0000149;gene_biotype=lncRNA;gene_name=LOC112268311;gene_sources=liftoff;ID=HG01358_ch_G0000149;Name=LOC112268311
HG01358_chrY	CAT	transcript	13351101	13353269	1000	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG01358_ch_T0000372;gene_id=HG01358_ch_G0000149;Parent=HG01358_ch_G0000149;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG01358_ch_T0000372;Name=LOC112268311
HG01358_chrY	CAT	exon	13351101	13352537	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG01358_ch_T0000372;gene_id=HG01358_ch_G0000149;Parent=HG01358_ch_T0000372;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG01358_ch_T0000372:0;Name=LOC112268311;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13352538	13353146	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG01358_ch_T0000372;gene_id=HG01358_ch_G0000149;Parent=HG01358_ch_T0000372;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG01358_ch_T0000372:0;Name=LOC112268311;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13353147	13353269	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG01358_ch_T0000372;gene_id=HG01358_ch_G0000149;Parent=HG01358_ch_T0000372;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG01358_ch_T0000372:1;Name=LOC112268311;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13351101	13353278	1000	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG01358_ch_T0000373;gene_id=HG01358_ch_G0000149;Parent=HG01358_ch_G0000149;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG01358_ch_T0000373;Name=LOC112268311
HG01358_chrY	CAT	exon	13351101	13352537	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG01358_ch_T0000373;gene_id=HG01358_ch_G0000149;Parent=HG01358_ch_T0000373;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG01358_ch_T0000373:0;Name=LOC112268311;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13352538	13353089	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG01358_ch_T0000373;gene_id=HG01358_ch_G0000149;Parent=HG01358_ch_T0000373;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG01358_ch_T0000373:0;Name=LOC112268311;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13353090	13353278	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG01358_ch_T0000373;gene_id=HG01358_ch_G0000149;Parent=HG01358_ch_T0000373;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG01358_ch_T0000373:1;Name=LOC112268311;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13352138	13382018	.	+	.	source_gene_common_name=TTTY15;source_gene=hg002_chrY_paternal_312;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;gene_id=HG01358_ch_G0000150;gene_biotype=lncRNA;gene_name=TTTY15;gene_sources=liftoff;ID=HG01358_ch_G0000150;Name=TTTY15
HG01358_chrY	CAT	transcript	13352138	13382018	1000	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01358_ch_T0000374;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_G0000150;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01358_ch_T0000374;Name=TTTY15
HG01358_chrY	CAT	exon	13352138	13352492	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01358_ch_T0000374;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000374;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000374:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13352493	13354425	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01358_ch_T0000374;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000374;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000374:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13354426	13354472	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01358_ch_T0000374;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000374;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000374:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13354473	13376297	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01358_ch_T0000374;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000374;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000374:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13376298	13376391	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01358_ch_T0000374;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000374;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000374:2;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13376392	13377248	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01358_ch_T0000374;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000374;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000374:2;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13377249	13382018	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01358_ch_T0000374;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000374;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000374:3;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13352138	13382018	1000	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01358_ch_T0000375;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_G0000150;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01358_ch_T0000375;Name=TTTY15
HG01358_chrY	CAT	exon	13352138	13352492	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01358_ch_T0000375;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000375;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000375:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13352493	13376297	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01358_ch_T0000375;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000375;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000375:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13376298	13376391	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01358_ch_T0000375;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000375;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000375:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13376392	13377248	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01358_ch_T0000375;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000375;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000375:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13377249	13382018	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01358_ch_T0000375;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000375;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000375:2;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13352138	13382018	1000	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01358_ch_T0000376;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_G0000150;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01358_ch_T0000376;Name=TTTY15
HG01358_chrY	CAT	exon	13352138	13352492	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01358_ch_T0000376;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000376;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000376:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13352493	13376297	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01358_ch_T0000376;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000376;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000376:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13376298	13376391	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01358_ch_T0000376;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000376;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000376:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13376392	13377469	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01358_ch_T0000376;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000376;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000376:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13377470	13382018	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01358_ch_T0000376;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000376;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000376:2;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13352138	13382018	1000	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01358_ch_T0000377;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_G0000150;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01358_ch_T0000377;Name=TTTY15
HG01358_chrY	CAT	exon	13352138	13352492	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01358_ch_T0000377;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000377;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000377:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13352493	13354425	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01358_ch_T0000377;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000377;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000377:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13354426	13354472	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01358_ch_T0000377;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000377;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000377:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13354473	13376297	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01358_ch_T0000377;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000377;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000377:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13376298	13376391	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01358_ch_T0000377;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000377;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000377:2;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13376392	13377469	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01358_ch_T0000377;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000377;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000377:2;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13377470	13382018	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01358_ch_T0000377;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000377;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000377:3;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13352138	13382018	1000	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01358_ch_T0000378;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_G0000150;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01358_ch_T0000378;Name=TTTY15
HG01358_chrY	CAT	exon	13352138	13352492	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01358_ch_T0000378;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000378;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000378:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13352493	13354425	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01358_ch_T0000378;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000378;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000378:0;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13354426	13354472	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01358_ch_T0000378;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000378;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000378:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13354473	13376297	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01358_ch_T0000378;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000378;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000378:1;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13376298	13376391	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01358_ch_T0000378;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000378;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000378:2;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13376392	13380110	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01358_ch_T0000378;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000378;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01358_ch_T0000378:2;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13380111	13382018	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01358_ch_T0000378;gene_id=HG01358_ch_G0000150;Parent=HG01358_ch_T0000378;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01358_ch_T0000378:3;Name=TTTY15;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13391016	13550626	.	+	.	source_gene_common_name=USP9Y;source_gene=hg002_chrY_paternal_313;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;gene_id=HG01358_ch_G0000151;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000151;Name=USP9Y
HG01358_chrY	CAT	transcript	13391016	13550626	100	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_G0000151;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG01358_ch_T0000379;Name=USP9Y
HG01358_chrY	CAT	exon	13391016	13391840	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13391841	13398418	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13398419	13398478	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13398479	13399172	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13399173	13399328	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13399233	13399328	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	13399233	13399235	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG01358_ch_T0000379;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13399329	13410373	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13410374	13410522	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13410374	13410522	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13410523	13411892	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13411893	13411972	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13411893	13411972	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13411973	13414897	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13414898	13415010	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13414898	13415010	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13415011	13416359	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13416360	13416578	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13416360	13416578	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13416579	13425396	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13425397	13425512	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13425397	13425512	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13425513	13425782	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13425783	13426034	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13425783	13426034	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13426035	13426195	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13426196	13426334	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13426196	13426334	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13426335	13427941	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13427942	13428094	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13427942	13428094	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13428095	13429309	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13429310	13429414	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13429310	13429414	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13429415	13446976	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13446977	13447183	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13446977	13447183	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13447184	13448290	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13448291	13448427	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13448291	13448427	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13448428	13450268	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13450269	13450402	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13450269	13450402	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13450403	13460852	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13460853	13460940	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13460853	13460940	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13460941	13463367	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13463368	13463710	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13463368	13463710	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13463711	13465255	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13465256	13465351	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13465256	13465351	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13465352	13466433	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13466434	13466645	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13466434	13466645	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13466646	13467803	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13467804	13468044	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13467804	13468044	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13468045	13468390	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13468391	13468540	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13468391	13468540	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13468541	13469310	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13469311	13469431	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13469311	13469431	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13469432	13475987	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13475988	13476118	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13475988	13476118	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13476119	13476306	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13476307	13476585	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13476307	13476585	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13476586	13480191	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13480192	13480317	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13480192	13480317	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13480318	13481283	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13481284	13481409	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13481284	13481409	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13481410	13482816	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13482817	13482986	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13482817	13482986	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13482987	13499964	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13499965	13500073	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13499965	13500073	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13500074	13500457	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13500458	13500604	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13500458	13500604	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13500605	13501420	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13501421	13501567	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13501421	13501567	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13501568	13502615	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13502616	13502838	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13502616	13502838	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13502839	13505909	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13505910	13506130	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13505910	13506130	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13506131	13508205	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13508206	13508396	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13508206	13508396	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13508397	13523474	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13523475	13523648	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13523475	13523648	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13523649	13527697	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13527698	13527839	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13527698	13527839	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13527840	13529650	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13529651	13530401	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13529651	13530401	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13530402	13530796	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13530797	13530920	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13530797	13530920	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13530921	13532026	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13532027	13532252	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13532027	13532252	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13532253	13532850	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13532851	13532980	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13532851	13532980	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13532981	13536119	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13536120	13536305	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13536120	13536305	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13536306	13536719	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13536720	13536940	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13536720	13536940	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13536941	13537025	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13537026	13537114	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13537026	13537114	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13537115	13546126	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13546127	13546283	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13546127	13546283	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13546284	13546419	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13546420	13546632	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:43;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13546420	13546632	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13546633	13547352	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:43;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13547353	13547448	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:44;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13547353	13547448	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13547449	13549065	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000379:44;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13549066	13550626	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000379:45;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13549066	13549203	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000379:43;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	13549201	13549203	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000379;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000379;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG01358_ch_T0000379;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13397638	13550626	100	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_G0000151;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG01358_ch_T0000380;Name=USP9Y
HG01358_chrY	CAT	exon	13397638	13397666	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13397667	13398418	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13398419	13398478	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13398479	13399172	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13399173	13399328	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13399233	13399328	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	13399233	13399235	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG01358_ch_T0000380;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13399329	13410373	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13410374	13410522	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13410374	13410522	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13410523	13411892	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13411893	13411972	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13411893	13411972	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13411973	13414897	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13414898	13415010	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13414898	13415010	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13415011	13416359	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13416360	13416578	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13416360	13416578	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13416579	13425396	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13425397	13425512	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13425397	13425512	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13425513	13425782	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13425783	13426034	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13425783	13426034	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13426035	13426195	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13426196	13426334	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13426196	13426334	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13426335	13427941	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13427942	13428094	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13427942	13428094	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13428095	13429309	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13429310	13429414	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13429310	13429414	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13429415	13446976	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13446977	13447183	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13446977	13447183	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13447184	13448290	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13448291	13448427	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13448291	13448427	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13448428	13450268	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13450269	13450402	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13450269	13450402	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13450403	13460852	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13460853	13460940	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13460853	13460940	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13460941	13463367	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13463368	13463710	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13463368	13463710	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13463711	13465255	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13465256	13465351	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13465256	13465351	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13465352	13466433	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13466434	13466645	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13466434	13466645	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13466646	13467803	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13467804	13468044	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13467804	13468044	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13468045	13468390	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13468391	13468540	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13468391	13468540	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13468541	13469310	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13469311	13469431	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13469311	13469431	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13469432	13475987	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13475988	13476118	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13475988	13476118	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13476119	13476306	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13476307	13476585	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13476307	13476585	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13476586	13480191	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13480192	13480317	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13480192	13480317	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13480318	13481283	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13481284	13481409	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13481284	13481409	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13481410	13482816	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13482817	13482986	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13482817	13482986	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13482987	13499964	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13499965	13500073	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13499965	13500073	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13500074	13500457	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13500458	13500604	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13500458	13500604	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13500605	13501420	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13501421	13501567	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13501421	13501567	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13501568	13502615	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13502616	13502838	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13502616	13502838	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13502839	13505909	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13505910	13506130	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13505910	13506130	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13506131	13508205	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13508206	13508396	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13508206	13508396	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13508397	13523474	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13523475	13523648	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13523475	13523648	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13523649	13527697	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13527698	13527839	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13527698	13527839	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13527840	13529650	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13529651	13530401	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13529651	13530401	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13530402	13530796	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13530797	13530920	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13530797	13530920	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13530921	13532026	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13532027	13532252	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13532027	13532252	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13532253	13532850	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13532851	13532980	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13532851	13532980	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13532981	13536119	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13536120	13536305	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13536120	13536305	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13536306	13536719	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13536720	13536940	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13536720	13536940	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13536941	13537025	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13537026	13537114	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13537026	13537114	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13537115	13546126	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13546127	13546283	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13546127	13546283	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13546284	13546419	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13546420	13546632	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:43;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13546420	13546632	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13546633	13547352	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:43;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13547353	13547448	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:44;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13547353	13547448	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13547449	13549065	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000380:44;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13549066	13550626	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000380:45;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13549066	13549203	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000380:43;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	13549201	13549203	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000380;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000380;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG01358_ch_T0000380;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13399241	13550626	100	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_G0000151;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG01358_ch_T0000381;Name=USP9Y
HG01358_chrY	CAT	exon	13399241	13399328	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13399329	13404423	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13404424	13404574	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13404575	13410373	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13410374	13410522	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13410512	13410522	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:0;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	13410512	13410514	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG01358_ch_T0000381;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13410523	13411892	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13411893	13411972	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13411893	13411972	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:1;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13411973	13414897	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13414898	13415010	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13414898	13415010	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:2;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13415011	13416359	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13416360	13416578	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13416360	13416578	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:3;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13416579	13425396	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13425397	13425512	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13425397	13425512	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:4;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13425513	13425782	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13425783	13426034	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13425783	13426034	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:5;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13426035	13426195	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13426196	13426334	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13426196	13426334	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:6;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13426335	13427941	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13427942	13428094	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13427942	13428094	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:7;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13428095	13429309	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13429310	13429414	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13429310	13429414	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:8;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13429415	13446976	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13446977	13447183	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13446977	13447183	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:9;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13447184	13448290	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13448291	13448427	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13448291	13448427	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:10;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13448428	13450268	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13450269	13450402	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13450269	13450402	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:11;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13450403	13460852	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13460853	13460940	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13460853	13460940	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:12;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13460941	13463367	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13463368	13463710	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13463368	13463710	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:13;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13463711	13465255	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13465256	13465351	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13465256	13465351	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:14;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13465352	13466433	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13466434	13466645	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13466434	13466645	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:15;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13466646	13467803	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13467804	13468044	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13467804	13468044	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:16;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13468045	13468390	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13468391	13468540	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13468391	13468540	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:17;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13468541	13469310	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13469311	13469431	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13469311	13469431	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:18;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13469432	13475987	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13475988	13476118	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13475988	13476118	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:19;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13476119	13476306	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13476307	13476585	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13476307	13476585	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:20;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13476586	13480191	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13480192	13480317	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13480192	13480317	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:21;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13480318	13481283	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13481284	13481409	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13481284	13481409	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:22;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13481410	13482816	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13482817	13482986	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13482817	13482986	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:23;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13482987	13499964	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13499965	13500073	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13499965	13500073	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:24;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13500074	13500457	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13500458	13500604	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13500458	13500604	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:25;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13500605	13501420	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13501421	13501567	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13501421	13501567	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:26;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13501568	13502615	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13502616	13502838	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13502616	13502838	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:27;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13502839	13505909	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13505910	13506130	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13505910	13506130	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:28;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13506131	13508205	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13508206	13508396	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13508206	13508396	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:29;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13508397	13523474	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13523475	13523648	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13523475	13523648	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:30;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13523649	13527697	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13527698	13527839	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13527698	13527839	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:31;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13527840	13529650	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13529651	13530401	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13529651	13530401	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:32;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13530402	13530796	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13530797	13530920	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13530797	13530920	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:33;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13530921	13532026	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13532027	13532252	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13532027	13532252	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:34;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13532253	13532850	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13532851	13532980	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13532851	13532980	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:35;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13532981	13536119	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13536120	13536305	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13536120	13536305	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:36;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13536306	13536719	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13536720	13536940	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13536720	13536940	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:37;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13536941	13537025	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13537026	13537114	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13537026	13537114	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:38;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13537115	13546126	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13546127	13546283	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13546127	13546283	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:39;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13546284	13546419	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13546420	13546632	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13546420	13546632	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:40;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13546633	13547352	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13547353	13547448	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:43;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13547353	13547448	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:41;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13547449	13549065	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01358_ch_T0000381:43;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13549066	13550626	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01358_ch_T0000381:44;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13549066	13549203	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01358_ch_T0000381:42;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	13549201	13549203	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000381;gene_id=HG01358_ch_G0000151;Parent=HG01358_ch_T0000381;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG01358_ch_T0000381;Name=USP9Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13594654	13610264	.	+	.	source_gene_common_name=DDX3Y;source_gene=hg002_chrY_paternal_315;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;gene_id=HG01358_ch_G0000152;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff,augTM,transMap;ID=HG01358_ch_G0000152;Name=DDX3Y
HG01358_chrY	CAT	transcript	13594654	13610264	1000	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_G0000152;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01358_ch_T0000382;Name=DDX3Y
HG01358_chrY	CAT	exon	13594654	13594767	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13594768	13597322	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13597323	13597380	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13597381	13599145	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13599146	13599193	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13599194	13601624	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13601625	13601754	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13601755	13602512	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13602513	13602848	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13602849	13603503	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13603504	13603639	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13603640	13604349	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604350	13605013	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605014	13605415	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605416	13605560	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605561	13605668	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605669	13605813	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605814	13606046	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606047	13606420	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606421	13606692	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606693	13606846	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606847	13607188	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607189	13607328	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13607329	13607828	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000382:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607829	13610264	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000382;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000382;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000382:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13594654	13610264	1000	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_G0000152;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01358_ch_T0000383;Name=DDX3Y
HG01358_chrY	CAT	exon	13594654	13594767	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13594768	13597322	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13597323	13597380	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13597381	13599145	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13599146	13599193	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13599194	13601624	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13601625	13601754	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13601755	13602512	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13602513	13602848	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13602849	13603503	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13603504	13603639	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13603640	13604349	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604350	13604435	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13604436	13604669	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604670	13604768	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13604769	13604852	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604853	13605013	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605014	13605415	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605416	13605560	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605561	13605668	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605669	13605813	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605814	13606046	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606047	13606420	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606421	13606692	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606693	13606846	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606847	13607188	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607189	13607328	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13607329	13607828	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000383:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607829	13610264	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000383;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000383;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000383:14;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13594654	13610264	1000	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_G0000152;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01358_ch_T0000384;Name=DDX3Y
HG01358_chrY	CAT	exon	13594654	13594767	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13594768	13597322	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13597323	13597380	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13597381	13599145	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13599146	13599193	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13599194	13602512	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13602513	13602848	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13602849	13603503	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13603504	13603639	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13603640	13604349	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604350	13605013	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605014	13605415	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605416	13605560	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605561	13605668	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605669	13605813	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605814	13606046	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606047	13606420	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606421	13606692	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606693	13606846	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606847	13607188	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607189	13607328	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13607329	13607828	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000384:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607829	13610264	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000384;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000384;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000384:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13594654	13610264	1000	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_G0000152;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01358_ch_T0000385;Name=DDX3Y
HG01358_chrY	CAT	exon	13594654	13594767	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13594768	13597322	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13597323	13597380	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13597381	13599145	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13599146	13599193	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13599194	13601624	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13601625	13601754	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13601755	13602512	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13602513	13602848	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13602849	13603503	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13603504	13603639	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13603640	13604349	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604350	13605013	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605014	13605415	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605416	13605560	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605561	13605668	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605669	13605813	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605814	13606046	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606047	13606420	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606421	13606761	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606762	13606846	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606847	13607188	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607189	13607328	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13607329	13607828	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000385:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607829	13610264	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000385;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000385;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000385:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13594654	13610264	1000	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_G0000152;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01358_ch_T0000386;Name=DDX3Y
HG01358_chrY	CAT	exon	13594654	13594767	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13594768	13597322	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13597323	13597380	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13597381	13599145	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13599146	13599193	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13599194	13601624	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13601625	13601754	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13601755	13602512	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13602513	13602848	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13602849	13603503	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13603504	13603639	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13603640	13604349	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604350	13604435	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13604436	13604669	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604670	13604768	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13604769	13604869	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604870	13605013	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605014	13605415	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605416	13605560	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605561	13605668	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605669	13605813	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605814	13606046	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606047	13606420	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606421	13606692	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606693	13606846	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606847	13607188	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607189	13607328	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13607329	13607828	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000386:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607829	13610264	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000386;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000386;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000386:14;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13595491	13610264	1000	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_G0000152;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01358_ch_T0000387;Name=DDX3Y
HG01358_chrY	CAT	exon	13595491	13595601	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13595602	13597322	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13597323	13597380	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13597381	13599145	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13599146	13599193	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13599194	13601624	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13601625	13601754	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13601755	13602512	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13602513	13602848	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13602849	13603503	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13603504	13603639	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13603640	13604349	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604350	13604435	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13604436	13604669	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604670	13604768	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13604769	13604852	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604853	13605013	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605014	13605415	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605416	13605560	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605561	13605668	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605669	13605813	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605814	13606046	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606047	13606420	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606421	13606692	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606693	13606846	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606847	13607188	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607189	13607328	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13607329	13607828	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000387:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607829	13610264	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000387;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000387;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000387:14;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13595491	13610264	1000	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_G0000152;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01358_ch_T0000388;Name=DDX3Y
HG01358_chrY	CAT	exon	13595491	13595601	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13595602	13597322	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13597323	13597380	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13597381	13599145	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13599146	13599193	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13599194	13601624	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13601625	13601754	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13601755	13602512	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13602513	13602848	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13602849	13603503	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13603504	13603639	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13603640	13604349	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604350	13605013	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605014	13605415	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605416	13605560	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605561	13605668	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605669	13605813	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605814	13606046	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606047	13606420	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606421	13606692	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606693	13606846	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606847	13607188	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607189	13607328	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13607329	13607828	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000388:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607829	13610264	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000388;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000388;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000388:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13597355	13610264	9960	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_G0000152;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=HG01358_ch_T0000389;Name=DDX3Y
HG01358_chrY	CAT	exon	13597355	13597380	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13597381	13599145	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13599146	13599193	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13599194	13602512	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13602513	13602848	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13602849	13603503	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13603504	13603639	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13603519	13603639	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	13603519	13603521	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=start_codon:HG01358_ch_T0000389;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13603640	13604349	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604350	13604435	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13604350	13604435	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13604436	13604669	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604670	13604768	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13604670	13604768	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13604769	13604852	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13604853	13605013	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13604853	13605013	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605014	13605415	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605416	13605560	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13605416	13605560	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605561	13605668	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13605669	13605813	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13605669	13605813	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13605814	13606046	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606047	13606228	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13606047	13606228	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606229	13606302	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606303	13606420	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13606303	13606420	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606421	13606692	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13606693	13606846	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13606693	13606846	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13606847	13607188	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607189	13607328	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13607189	13607328	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13607329	13607828	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01358_ch_T0000389:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13607829	13610264	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01358_ch_T0000389:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	13607829	13607908	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01358_ch_T0000389:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	13607906	13607908	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000389;gene_id=HG01358_ch_G0000152;Parent=HG01358_ch_T0000389;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=stop_codon:HG01358_ch_T0000389;Name=DDX3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13801112	13815428	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;alternative_source_transcripts=hg002_chrY_paternal_318.1;gene_id=HG01358_ch_G0000153;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=transMap;ID=HG01358_ch_G0000153;Name=LOC112268312
HG01358_chrY	CAT	transcript	13801112	13808695	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG01358_ch_T0000390;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_G0000153;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01358_ch_T0000390;Name=LOC112268312
HG01358_chrY	CAT	exon	13801112	13801200	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG01358_ch_T0000390;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000390;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000390:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13801201	13801386	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG01358_ch_T0000390;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000390;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000390:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13801387	13801549	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG01358_ch_T0000390;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000390;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000390:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13801550	13807496	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG01358_ch_T0000390;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000390;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000390:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13807497	13808695	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG01358_ch_T0000390;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000390;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000390:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13801112	13815428	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG01358_ch_T0000391;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_G0000153;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01358_ch_T0000391;Name=LOC112268312
HG01358_chrY	CAT	exon	13801112	13801200	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG01358_ch_T0000391;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000391;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000391:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13801201	13801386	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG01358_ch_T0000391;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000391;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000391:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13801387	13801549	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG01358_ch_T0000391;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000391;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000391:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13801550	13807496	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG01358_ch_T0000391;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000391;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000391:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13807497	13807633	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG01358_ch_T0000391;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000391;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000391:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13807634	13815061	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG01358_ch_T0000391;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000391;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000391:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13815062	13815428	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG01358_ch_T0000391;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000391;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000391:3;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13801234	13808695	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG01358_ch_T0000392;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_G0000153;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01358_ch_T0000392;Name=LOC112268312
HG01358_chrY	CAT	exon	13801234	13801252	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG01358_ch_T0000392;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000392;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000392:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13801253	13801386	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG01358_ch_T0000392;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000392;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000392:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13801387	13801549	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG01358_ch_T0000392;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000392;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000392:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13801550	13807496	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG01358_ch_T0000392;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000392;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01358_ch_T0000392:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13807497	13808695	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG01358_ch_T0000392;gene_id=HG01358_ch_G0000153;Parent=HG01358_ch_T0000392;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01358_ch_T0000392:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	13923680	14170448	.	-	.	source_gene_common_name=UTY;source_gene=hg002_chrY_paternal_321;alternative_source_transcripts=hg002_chrY_paternal_321.4;gene_id=HG01358_ch_G0000154;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,augTM,transMap;ID=HG01358_ch_G0000154;Name=UTY
HG01358_chrY	CAT	transcript	13923680	14169811	1000	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000393;Name=UTY
HG01358_chrY	CAT	exon	13923680	13924611	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13924612	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000393:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14169811	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000393;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000393:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000394;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000394:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000394;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000394:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000395;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14093568	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14093569	14093674	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14093675	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000395:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000395;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000395:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000396;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995437	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995438	13995505	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995506	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059045	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059046	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14093568	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14093569	14093674	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14093675	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000396:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000396;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000396:29;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000397;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14024002	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14024003	14024125	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14024126	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000397:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000397;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000397:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000398;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14045159	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045160	14045313	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045314	14045422	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045423	14045488	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045489	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000398:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000398;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000398:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000399;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14025585	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14025586	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000399:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000399;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000399:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000400;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000400:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000400;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000400:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000401;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14165680	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14165681	14165803	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14165804	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000401:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000401;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000401:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000402;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14025585	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14025586	14045159	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045160	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000402:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000402;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000402:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000403;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13968025	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13968026	13968130	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13968131	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050265	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050266	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000403:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000403;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000403:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000404;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048095	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048096	14048231	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048232	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000404:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000404;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000404:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000405;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048095	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048096	14048306	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048307	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000405:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000405;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000405:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000406;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995437	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995438	13995505	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995506	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050265	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050266	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000406:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000406;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000406:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000407;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14045159	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045160	14045313	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045314	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000407:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000407;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000407:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000408;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995437	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995438	13995505	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995506	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000408:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000408;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000408:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000409;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000409:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000409;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000409:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000410;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000410:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000410;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000410:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000411;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000411:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000411;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000411:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000412;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989785	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989786	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048338	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048339	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14089723	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14089724	14089837	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14089838	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000412:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000412;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000412:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000413;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989785	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989786	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048306	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048307	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000413:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000413;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000413:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000414;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995270	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995271	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14089723	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14089724	14089837	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14089838	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000414:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000414;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000414:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000415;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13993966	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13993967	13993995	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13993996	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016127	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016128	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14093568	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14093569	14093674	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14093675	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000415:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000415;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000415:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000416;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989761	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989762	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14044877	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14044878	14045159	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045160	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:29;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000416:29;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000416;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000416:30;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000417;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048306	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048307	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000417:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000417;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000417:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000418;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000418:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000418;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000418:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000419;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016127	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016128	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14093568	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14093569	14093674	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14093675	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000419:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000419;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000419:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000420;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000420:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000420;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000420:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000421;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989785	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989786	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000421:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000421;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000421:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000422;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14089723	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14089724	14089837	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14089838	14093568	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14093569	14093674	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14093675	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000422:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000422;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000422:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000423;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000423:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000423;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000423:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000424;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000424:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000424;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000424:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000425;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14025585	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14025586	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000425:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000425;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000425:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000426;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044570	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044571	14044618	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14044619	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000426:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000426;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000426:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000427;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14012886	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14012887	14013153	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013154	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000427:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000427;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000427:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000428;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989761	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989762	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000428;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000428:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000429;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989785	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989786	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14045159	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045160	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14129472	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14129473	14129552	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14129553	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000429:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000429;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000429:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000430;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14045159	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045160	14045313	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045314	14045422	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045423	14045488	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045489	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048338	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048339	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000430:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000430;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000430:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000431;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016127	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016128	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000431;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000432;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059045	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059046	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000432;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000432:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000433;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044570	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044571	14044618	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14044619	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048338	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048339	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000433:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000433;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000433:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000434;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940786	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940787	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048306	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048307	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000434:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000434;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000434:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000435;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059045	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059046	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14093568	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14093569	14093674	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14093675	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000435;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000436;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000436;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000437;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016127	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016128	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14093568	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14093569	14093674	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14093675	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000437;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000437:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000438;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995437	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995438	13995505	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995506	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000438;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000438:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000439;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13968025	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13968026	13968130	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13968131	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000439:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000439;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000439:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000440;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14025585	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14025586	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000440:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000440;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000440:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000441;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048306	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048307	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000441:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000441;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000441:28;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000442;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14093568	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14093569	14093674	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14093675	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000442:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000442;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000442:27;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000443;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000443;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000443:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13938164	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000444;Name=UTY
HG01358_chrY	CAT	exon	13938164	13939667	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13939668	13940801	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13940802	13940972	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13940973	13950062	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13950063	13950189	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13950190	13987491	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13987492	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049728	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049729	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000444;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000444:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13987294	14169811	1000	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000445;Name=UTY
HG01358_chrY	CAT	exon	13987294	13987633	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13987634	13988741	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13988742	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989761	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989762	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14169811	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000445;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13988875	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000446;Name=UTY
HG01358_chrY	CAT	exon	13988875	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989761	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989762	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044570	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044571	14044618	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14044619	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000446;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000446:26;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	13988911	14170448	1000	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_G0000154;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01358_ch_T0000447;Name=UTY
HG01358_chrY	CAT	exon	13988911	13988929	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13988930	13989761	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13989762	13989853	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13989854	13992661	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13992662	13992776	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13992777	13995183	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995184	13995332	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13995333	13995822	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	13995823	13996035	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	13996036	14013339	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14013340	14013545	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14013546	14014385	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14014386	14014491	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14014492	14016005	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14016006	14016135	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14016136	14025347	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14025348	14026120	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14026121	14044787	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14044788	14045183	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045184	14045707	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14045708	14045803	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14045804	14047661	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14047662	14047754	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14047755	14048248	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048249	14048404	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14048405	14048872	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14048873	14049007	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049008	14049551	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14049552	14049771	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14049772	14050214	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14050215	14050313	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14050314	14056051	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14056052	14056178	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14056179	14059040	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14059041	14059134	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14059135	14083644	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14083645	14083679	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14083680	14086703	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14086704	14086758	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14086759	14100778	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14100779	14100899	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14100900	14104520	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14104521	14104579	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14104580	14138794	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14138795	14138844	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14138845	14159898	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14159899	14160007	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14160008	14169031	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169032	14169095	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14169096	14169291	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01358_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14169292	14170448	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01358_ch_T0000447;gene_id=HG01358_ch_G0000154;Parent=HG01358_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01358_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	14168955	14168992	.	+	.	source_gene_common_name=MIR12120;source_gene=hg002_chrY_paternal_323;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;gene_id=HG01358_ch_G0000155;gene_biotype=miRNA;gene_name=MIR12120;gene_sources=liftoff;ID=HG01358_ch_G0000155;Name=MIR12120
HG01358_chrY	CAT	transcript	14168955	14169044	1000	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG01358_ch_T0000448;gene_id=HG01358_ch_G0000155;Parent=HG01358_ch_G0000155;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG01358_ch_T0000448;Name=MIR12120
HG01358_chrY	CAT	exon	14168955	14169044	.	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG01358_ch_T0000448;gene_id=HG01358_ch_G0000155;Parent=HG01358_ch_T0000448;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG01358_ch_T0000448:0;Name=MIR12120;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	14168967	14168992	1000	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG01358_ch_T0000449;gene_id=HG01358_ch_G0000155;Parent=HG01358_ch_G0000155;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG01358_ch_T0000449;Name=MIR12120
HG01358_chrY	CAT	exon	14168967	14168992	.	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG01358_ch_T0000449;gene_id=HG01358_ch_G0000155;Parent=HG01358_ch_T0000449;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG01358_ch_T0000449:0;Name=MIR12120;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	14393648	14395773	.	+	.	source_gene_common_name=TMSB4Y;source_gene=hg002_chrY_paternal_324;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;gene_id=HG01358_ch_G0000156;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG01358_ch_G0000156;Name=TMSB4Y
HG01358_chrY	CAT	transcript	14393648	14395773	100	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01358_ch_T0000450;gene_id=HG01358_ch_G0000156;Parent=HG01358_ch_G0000156;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=HG01358_ch_T0000450;Name=TMSB4Y
HG01358_chrY	CAT	exon	14393648	14394184	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01358_ch_T0000450;gene_id=HG01358_ch_G0000156;Parent=HG01358_ch_T0000450;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG01358_ch_T0000450:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	14394085	14394184	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01358_ch_T0000450;gene_id=HG01358_ch_G0000156;Parent=HG01358_ch_T0000450;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG01358_ch_T0000450:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	14394085	14394087	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01358_ch_T0000450;gene_id=HG01358_ch_G0000156;Parent=HG01358_ch_T0000450;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=start_codon:HG01358_ch_T0000450;Name=TMSB4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14394185	14394973	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01358_ch_T0000450;gene_id=HG01358_ch_G0000156;Parent=HG01358_ch_T0000450;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=intron:HG01358_ch_T0000450:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14394974	14395773	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01358_ch_T0000450;gene_id=HG01358_ch_G0000156;Parent=HG01358_ch_T0000450;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG01358_ch_T0000450:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	14394974	14395008	.	+	2	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01358_ch_T0000450;gene_id=HG01358_ch_G0000156;Parent=HG01358_ch_T0000450;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG01358_ch_T0000450:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	14395006	14395008	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01358_ch_T0000450;gene_id=HG01358_ch_G0000156;Parent=HG01358_ch_T0000450;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=stop_codon:HG01358_ch_T0000450;Name=TMSB4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	14675540	14676241	.	-	.	source_gene_common_name=VCY;source_gene=hg002_chrY_paternal_327;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;gene_id=HG01358_ch_G0000157;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000157;Name=VCY
HG01358_chrY	CAT	transcript	14675540	14676241	100	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000451;gene_id=HG01358_ch_G0000157;Parent=HG01358_ch_G0000157;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=HG01358_ch_T0000451;Name=VCY
HG01358_chrY	CAT	exon	14675540	14675914	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000451;gene_id=HG01358_ch_G0000157;Parent=HG01358_ch_T0000451;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG01358_ch_T0000451:0;Name=VCY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	14675639	14675914	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000451;gene_id=HG01358_ch_G0000157;Parent=HG01358_ch_T0000451;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG01358_ch_T0000451:0;Name=VCY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	14675639	14675641	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000451;gene_id=HG01358_ch_G0000157;Parent=HG01358_ch_T0000451;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=stop_codon:HG01358_ch_T0000451;Name=VCY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14675915	14676106	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000451;gene_id=HG01358_ch_G0000157;Parent=HG01358_ch_T0000451;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=intron:HG01358_ch_T0000451:0;Name=VCY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14676107	14676241	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000451;gene_id=HG01358_ch_G0000157;Parent=HG01358_ch_T0000451;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG01358_ch_T0000451:1;Name=VCY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	14676107	14676208	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000451;gene_id=HG01358_ch_G0000157;Parent=HG01358_ch_T0000451;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG01358_ch_T0000451:1;Name=VCY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	14676206	14676208	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000451;gene_id=HG01358_ch_G0000157;Parent=HG01358_ch_T0000451;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=start_codon:HG01358_ch_T0000451;Name=VCY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	14745986	14746717	.	+	.	source_gene_common_name=VCY1B;source_gene=hg002_chrY_paternal_328;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;gene_id=HG01358_ch_G0000158;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000158;Name=VCY1B
HG01358_chrY	CAT	transcript	14745986	14746717	100	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000452;gene_id=HG01358_ch_G0000158;Parent=HG01358_ch_G0000158;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=HG01358_ch_T0000452;Name=VCY1B
HG01358_chrY	CAT	exon	14745986	14746150	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000452;gene_id=HG01358_ch_G0000158;Parent=HG01358_ch_T0000452;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG01358_ch_T0000452:0;Name=VCY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	14746049	14746150	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000452;gene_id=HG01358_ch_G0000158;Parent=HG01358_ch_T0000452;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG01358_ch_T0000452:0;Name=VCY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	14746049	14746051	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000452;gene_id=HG01358_ch_G0000158;Parent=HG01358_ch_T0000452;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=start_codon:HG01358_ch_T0000452;Name=VCY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	14746151	14746342	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000452;gene_id=HG01358_ch_G0000158;Parent=HG01358_ch_T0000452;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=intron:HG01358_ch_T0000452:0;Name=VCY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	14746343	14746717	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000452;gene_id=HG01358_ch_G0000158;Parent=HG01358_ch_T0000452;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG01358_ch_T0000452:1;Name=VCY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	14746343	14746618	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000452;gene_id=HG01358_ch_G0000158;Parent=HG01358_ch_T0000452;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG01358_ch_T0000452:1;Name=VCY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	14746616	14746618	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000452;gene_id=HG01358_ch_G0000158;Parent=HG01358_ch_T0000452;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=stop_codon:HG01358_ch_T0000452;Name=VCY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	15212454	15535485	.	+	.	source_gene_common_name=NLGN4Y;source_gene=hg002_chrY_paternal_331;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;gene_id=HG01358_ch_G0000159;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000159;Name=NLGN4Y
HG01358_chrY	CAT	transcript	15212454	15423384	100	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000453;Name=NLGN4Y
HG01358_chrY	CAT	exon	15212454	15212779	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000453:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15212780	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000453:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000453:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000453:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000453;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000453:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000453:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000453:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000453:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000453:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000453:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15423286	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000453:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15423287	15423384	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000453:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15423287	15423372	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000453:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15423370	15423372	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000453;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000453;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15212454	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000454;Name=NLGN4Y
HG01358_chrY	CAT	exon	15212454	15212779	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000454:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15212780	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000454:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000454:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000454:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000454:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412984	15413104	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000454:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15412984	15412986	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000454;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000454:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000454:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000454:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000454:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000454:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000454:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000454:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000454:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000454:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000454;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000454;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15212454	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000455;Name=NLGN4Y
HG01358_chrY	CAT	exon	15212454	15212779	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000455:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15212780	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000455:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000455:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000455:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000455;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000455:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000455:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000455:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000455:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000455:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000455:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000455:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000455:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000455:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000455:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000455:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000455:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000455:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000455:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000455:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000455;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000455;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15212454	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000456;Name=NLGN4Y
HG01358_chrY	CAT	exon	15212454	15212779	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000456:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15212780	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000456:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000456:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000456:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000456;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000456:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000456:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000456:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000456:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000456:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000456:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000456:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000456:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000456:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000456:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000456:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000456:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000456;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000456;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15212454	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000457;Name=NLGN4Y
HG01358_chrY	CAT	exon	15212454	15213410	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000457:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15213411	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000457:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000457:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000457:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000457;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000457:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000457:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000457:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000457:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000457:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000457:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000457:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000457:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000457:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000457:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000457:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000457:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000457:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000457:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000457:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000457;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000457;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15213584	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000458;Name=NLGN4Y
HG01358_chrY	CAT	exon	15213584	15213736	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000458:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15213737	15311858	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000458:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311859	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000458:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000458:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000458;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000458:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000458:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000458:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000458:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000458:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000458:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000458:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000458:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000458:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000458:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000458:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000458:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000458;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000458;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000458;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15213810	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000459;Name=NLGN4Y
HG01358_chrY	CAT	exon	15213810	15214122	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000459:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214123	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000459:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000459:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000459:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000459;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000459:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000459:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000459:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000459:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000459:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000459:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000459:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000459:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000459:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000459:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000459:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000459:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000459:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000459:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000459:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000459;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000459;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000459;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15213810	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000460;Name=NLGN4Y
HG01358_chrY	CAT	exon	15213810	15214122	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000460:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214123	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000460:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000460:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000460:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000460;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000460:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000460:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000460:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000460:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000460:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000460:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000460:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000460:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000460:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000460:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000460:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000460:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000460;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000460;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000460;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15423384	100	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000461;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214774	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000461:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214775	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000461:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000461:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000461:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000461;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000461:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000461:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000461:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000461:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000461:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000461:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15423286	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000461:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15423287	15423384	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000461:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15423287	15423372	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000461:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15423370	15423372	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000461;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000461;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000461;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000462;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214774	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000462:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214775	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000462:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000462:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000462:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000462;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000462:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000462:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000462:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000462:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000462:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000462:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000462:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000462:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000462:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000462:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000462:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000462:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000462:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000462:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000462:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000462;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000462;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000462;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000463;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214546	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000463:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214547	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000463:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000463:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000463:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000463;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000463:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000463:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000463:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000463:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000463:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000463:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000463:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000463:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000463:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000463:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000463:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000463:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000463:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000463:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000463:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000463;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000463;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000463;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000464;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214774	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000464:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214775	15274011	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000464:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15274012	15274113	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000464:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15274114	15277447	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000464:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15277448	15277552	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000464:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15277553	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000464:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000464:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000464:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000464;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000464:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000464:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000464:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000464:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000464:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000464:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000464:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000464:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000464:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000464:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000464:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000464:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000464;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000464;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000464;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000465;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214546	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000465:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214547	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000465:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000465:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000465:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000465;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000465:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000465:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000465:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000465:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000465:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000465:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000465:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000465:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000465:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000465:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000465:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000465:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000465;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000465;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000465;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000466;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214395	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000466:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214396	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000466:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000466:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000466:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000466;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000466:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000466:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000466:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000466:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000466:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000466:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000466:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000466:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000466:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000466:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000466:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000466:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000466;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000466;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000466;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000467;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214774	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000467:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214775	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000467:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000467:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000467:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000467;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000467:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000467:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000467:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000467:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000467:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000467:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000467:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000467:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000467:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000467:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000467:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000467:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000467;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000467;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000467;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000468;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214774	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000468:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214775	15250429	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000468:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15250430	15250509	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000468:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15250510	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000468:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000468:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000468:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000468;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000468:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000468:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000468:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000468:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000468:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000468:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000468:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000468:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000468:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000468:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000468:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000468:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000468:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000468:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000468:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000468;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000468;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000468;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000469;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214395	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000469:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214396	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000469:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000469:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000469:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000469;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000469:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000469:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000469:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000469:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000469:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000469:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000469:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000469:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000469:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000469:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000469:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000469:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000469:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000469:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000469:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000469;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000469;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000469;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000470;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214774	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000470:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214775	15250429	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000470:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15250430	15250509	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000470:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15250510	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000470:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000470:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000470:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000470;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000470:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000470:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000470:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000470:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000470:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000470:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000470:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000470:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000470:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000470:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000470:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000470:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000470;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000470;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000470;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15214367	15423384	100	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000471;Name=NLGN4Y
HG01358_chrY	CAT	exon	15214367	15214546	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000471:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15214547	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000471:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000471:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000471:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000471;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000471:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000471:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000471:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000471:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000471:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000471:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15423286	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000471:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15423287	15423384	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000471:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15423287	15423372	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000471:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15423370	15423372	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000471;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000471;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000471;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15243572	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000472;Name=NLGN4Y
HG01358_chrY	CAT	exon	15243572	15250509	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000472:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15250510	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000472:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000472:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000472:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000472;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000472:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000472:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000472:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000472:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000472:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000472:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000472:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000472:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000472:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000472:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000472:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000472:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000472:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000472:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000472:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000472;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000472;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000472;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15272427	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000473;Name=NLGN4Y
HG01358_chrY	CAT	exon	15272427	15274129	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000473:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15274130	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000473:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000473:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000473:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000473;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000473:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000473:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000473:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000473:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000473:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000473:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000473:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000473:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000473:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000473:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000473:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000473:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000473:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000473:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000473:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000473;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000473;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000473;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15272427	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000474;Name=NLGN4Y
HG01358_chrY	CAT	exon	15272427	15274129	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000474:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15274130	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000474:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000474:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000474:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000474;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000474:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000474:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000474:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000474:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000474:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000474:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000474:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000474:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000474:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000474:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000474:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000474:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000474;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000474;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000474;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15277448	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000475;Name=NLGN4Y
HG01358_chrY	CAT	exon	15277448	15277552	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000475:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15277553	15311846	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000475:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000475:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000475:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000475;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000475:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000475:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000475:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000475:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000475:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000475:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000475:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000475:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000475:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000475:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000475:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000475:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000475:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000475:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000475:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000475;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000475;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000475;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15311847	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000476;Name=NLGN4Y
HG01358_chrY	CAT	exon	15311847	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000476:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15390872	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000476:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15390873	15390966	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000476:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15390930	15390966	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000476:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15390930	15390932	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000476;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15390967	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000476:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000476:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000476:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000476:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000476:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000476:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000476:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000476:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000476:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000476:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000476:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000476:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000476:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000476:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000476:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000476;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000476;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000476;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15311859	15423384	100	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000477;Name=NLGN4Y
HG01358_chrY	CAT	exon	15311859	15312429	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000477:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15311958	15312429	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000477:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15311958	15311960	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000477;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15312430	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000477:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000477:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15409293	15409352	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000477:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000477:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000477:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412952	15413104	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000477:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15423286	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000477:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15423287	15423384	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000477:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15423287	15423372	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000477:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15423370	15423372	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000477;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000477;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000477;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	15394621	15535485	100	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_G0000159;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01358_ch_T0000478;Name=NLGN4Y
HG01358_chrY	CAT	exon	15394621	15394641	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000478:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15394642	15409292	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000478:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15409293	15409352	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000478:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15409353	15412951	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000478:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15412952	15413104	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000478:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15412984	15413104	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000478:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	15412984	15412986	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01358_ch_T0000478;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15413105	15514018	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000478:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15514019	15514204	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000478:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15514019	15514204	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000478:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15514205	15519560	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000478:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15519561	15520350	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000478:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15519561	15520350	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000478:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15520351	15530243	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01358_ch_T0000478:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15530244	15535485	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01358_ch_T0000478:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	15530244	15531093	.	+	1	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01358_ch_T0000478:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	15531091	15531093	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000478;gene_id=HG01358_ch_G0000159;Parent=HG01358_ch_T0000478;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01358_ch_T0000478;Name=NLGN4Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	15483474	15493864	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=hg002_chrY_paternal_333;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;gene_id=HG01358_ch_G0000160;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG01358_ch_G0000160;Name=NLGN4Y-AS1
HG01358_chrY	CAT	transcript	15483474	15493864	1000	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01358_ch_T0000479;gene_id=HG01358_ch_G0000160;Parent=HG01358_ch_G0000160;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=HG01358_ch_T0000479;Name=NLGN4Y-AS1
HG01358_chrY	CAT	exon	15483474	15483819	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01358_ch_T0000479;gene_id=HG01358_ch_G0000160;Parent=HG01358_ch_T0000479;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG01358_ch_T0000479:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15483820	15488453	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01358_ch_T0000479;gene_id=HG01358_ch_G0000160;Parent=HG01358_ch_T0000479;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG01358_ch_T0000479:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15488454	15488541	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01358_ch_T0000479;gene_id=HG01358_ch_G0000160;Parent=HG01358_ch_T0000479;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG01358_ch_T0000479:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15488542	15491107	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01358_ch_T0000479;gene_id=HG01358_ch_G0000160;Parent=HG01358_ch_T0000479;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG01358_ch_T0000479:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15491108	15491176	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01358_ch_T0000479;gene_id=HG01358_ch_G0000160;Parent=HG01358_ch_T0000479;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG01358_ch_T0000479:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15491177	15493835	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01358_ch_T0000479;gene_id=HG01358_ch_G0000160;Parent=HG01358_ch_T0000479;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG01358_ch_T0000479:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	15493836	15493864	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01358_ch_T0000479;gene_id=HG01358_ch_G0000160;Parent=HG01358_ch_T0000479;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG01358_ch_T0000479:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	15936922	16054948	.	-	.	source_gene_common_name=LOC107987355;source_gene=hg002_chrY_paternal_336;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;gene_id=HG01358_ch_G0000161;gene_biotype=lncRNA;gene_name=LOC107987355;gene_sources=liftoff;ID=HG01358_ch_G0000161;Name=LOC107987355
HG01358_chrY	CAT	transcript	15936922	16054948	1000	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01358_ch_T0000480;gene_id=HG01358_ch_G0000161;Parent=HG01358_ch_G0000161;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=HG01358_ch_T0000480;Name=LOC107987355
HG01358_chrY	CAT	exon	15936922	15936994	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01358_ch_T0000480;gene_id=HG01358_ch_G0000161;Parent=HG01358_ch_T0000480;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG01358_ch_T0000480:0;Name=LOC107987355;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	15936995	16038481	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01358_ch_T0000480;gene_id=HG01358_ch_G0000161;Parent=HG01358_ch_T0000480;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG01358_ch_T0000480:0;Name=LOC107987355;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	16038482	16038704	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01358_ch_T0000480;gene_id=HG01358_ch_G0000161;Parent=HG01358_ch_T0000480;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG01358_ch_T0000480:1;Name=LOC107987355;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	16038705	16054862	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01358_ch_T0000480;gene_id=HG01358_ch_G0000161;Parent=HG01358_ch_T0000480;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG01358_ch_T0000480:1;Name=LOC107987355;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	16054863	16054948	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01358_ch_T0000480;gene_id=HG01358_ch_G0000161;Parent=HG01358_ch_T0000480;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG01358_ch_T0000480:2;Name=LOC107987355;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	16828184	16828315	.	-	.	source_gene_common_name=LOC124900508;source_gene=hg002_chrY_paternal_339;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;gene_id=HG01358_ch_G0000162;gene_biotype=snoRNA;gene_name=LOC124900508;gene_sources=liftoff;ID=HG01358_ch_G0000162;Name=LOC124900508
HG01358_chrY	CAT	transcript	16828184	16828315	1000	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG01358_ch_T0000481;gene_id=HG01358_ch_G0000162;Parent=HG01358_ch_G0000162;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=HG01358_ch_T0000481;Name=LOC124900508
HG01358_chrY	CAT	exon	16828184	16828315	.	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG01358_ch_T0000481;gene_id=HG01358_ch_G0000162;Parent=HG01358_ch_T0000481;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=exon:HG01358_ch_T0000481:0;Name=LOC124900508;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18190883	18206667	.	+	.	source_gene_common_name=FAM41AY2;source_gene=hg002_chrY_paternal_344;alternative_source_transcripts=hg002_chrY_paternal_344.1;gene_id=HG01358_ch_G0000163;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG01358_ch_G0000163;Name=FAM41AY2
HG01358_chrY	CAT	transcript	18190883	18206667	1000	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_G0000163;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=HG01358_ch_T0000482;Name=FAM41AY2
HG01358_chrY	CAT	exon	18190883	18191040	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18191041	18191635	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18191636	18191685	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18191686	18203022	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18203023	18203151	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18203152	18203398	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18203399	18203492	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18203493	18204085	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18204086	18204256	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18204257	18204365	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18204366	18204459	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18204460	18204733	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18204734	18204943	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18204944	18205236	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18205237	18205424	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18205425	18205636	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18205637	18205858	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18205859	18205940	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01358_ch_T0000482:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18205941	18206667	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG01358_ch_T0000482;gene_id=HG01358_ch_G0000163;Parent=HG01358_ch_T0000482;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01358_ch_T0000482:9;Name=FAM41AY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18244071	18253332	.	-	.	source_gene_common_name=LOC105377217;source_gene=hg002_chrY_paternal_346;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;gene_id=HG01358_ch_G0000164;gene_biotype=lncRNA;gene_name=LOC105377217;gene_sources=liftoff;ID=HG01358_ch_G0000164;Name=LOC105377217
HG01358_chrY	CAT	transcript	18244071	18253332	1000	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01358_ch_T0000483;gene_id=HG01358_ch_G0000164;Parent=HG01358_ch_G0000164;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=HG01358_ch_T0000483;Name=LOC105377217
HG01358_chrY	CAT	exon	18244071	18245937	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01358_ch_T0000483;gene_id=HG01358_ch_G0000164;Parent=HG01358_ch_T0000483;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG01358_ch_T0000483:0;Name=LOC105377217;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18245938	18246647	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01358_ch_T0000483;gene_id=HG01358_ch_G0000164;Parent=HG01358_ch_T0000483;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG01358_ch_T0000483:0;Name=LOC105377217;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18246648	18246776	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01358_ch_T0000483;gene_id=HG01358_ch_G0000164;Parent=HG01358_ch_T0000483;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG01358_ch_T0000483:1;Name=LOC105377217;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18246777	18247990	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01358_ch_T0000483;gene_id=HG01358_ch_G0000164;Parent=HG01358_ch_T0000483;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG01358_ch_T0000483:1;Name=LOC105377217;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18247991	18253332	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01358_ch_T0000483;gene_id=HG01358_ch_G0000164;Parent=HG01358_ch_T0000483;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG01358_ch_T0000483:2;Name=LOC105377217;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18265112	18269401	.	-	.	source_gene_common_name=FAM224A;source_gene=hg002_chrY_paternal_349;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;gene_id=HG01358_ch_G0000165;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=HG01358_ch_G0000165;Name=FAM224A
HG01358_chrY	CAT	transcript	18265112	18269401	1000	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01358_ch_T0000484;gene_id=HG01358_ch_G0000165;Parent=HG01358_ch_G0000165;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=HG01358_ch_T0000484;Name=FAM224A
HG01358_chrY	CAT	exon	18265112	18265295	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01358_ch_T0000484;gene_id=HG01358_ch_G0000165;Parent=HG01358_ch_T0000484;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG01358_ch_T0000484:0;Name=FAM224A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18265296	18266630	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01358_ch_T0000484;gene_id=HG01358_ch_G0000165;Parent=HG01358_ch_T0000484;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG01358_ch_T0000484:0;Name=FAM224A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18266631	18266748	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01358_ch_T0000484;gene_id=HG01358_ch_G0000165;Parent=HG01358_ch_T0000484;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG01358_ch_T0000484:1;Name=FAM224A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18266749	18269243	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01358_ch_T0000484;gene_id=HG01358_ch_G0000165;Parent=HG01358_ch_T0000484;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG01358_ch_T0000484:1;Name=FAM224A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18269244	18269401	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01358_ch_T0000484;gene_id=HG01358_ch_G0000165;Parent=HG01358_ch_T0000484;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG01358_ch_T0000484:2;Name=FAM224A;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18378437	18379237	.	-	.	source_gene_common_name=LOC105377219;source_gene=hg002_chrY_paternal_352;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;gene_id=HG01358_ch_G0000166;gene_biotype=lncRNA;gene_name=LOC105377219;gene_sources=liftoff;ID=HG01358_ch_G0000166;Name=LOC105377219
HG01358_chrY	CAT	transcript	18378437	18379237	1000	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01358_ch_T0000485;gene_id=HG01358_ch_G0000166;Parent=HG01358_ch_G0000166;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=HG01358_ch_T0000485;Name=LOC105377219
HG01358_chrY	CAT	exon	18378437	18378893	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01358_ch_T0000485;gene_id=HG01358_ch_G0000166;Parent=HG01358_ch_T0000485;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG01358_ch_T0000485:0;Name=LOC105377219;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18378894	18378981	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01358_ch_T0000485;gene_id=HG01358_ch_G0000166;Parent=HG01358_ch_T0000485;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG01358_ch_T0000485:0;Name=LOC105377219;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18378982	18379067	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01358_ch_T0000485;gene_id=HG01358_ch_G0000166;Parent=HG01358_ch_T0000485;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG01358_ch_T0000485:1;Name=LOC105377219;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18379068	18379154	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01358_ch_T0000485;gene_id=HG01358_ch_G0000166;Parent=HG01358_ch_T0000485;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG01358_ch_T0000485:1;Name=LOC105377219;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18379155	18379237	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01358_ch_T0000485;gene_id=HG01358_ch_G0000166;Parent=HG01358_ch_T0000485;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG01358_ch_T0000485:2;Name=LOC105377219;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18382855	18389715	.	-	.	source_gene_common_name=LOC124905303;source_gene=hg002_chrY_paternal_353;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;gene_id=HG01358_ch_G0000167;gene_biotype=lncRNA;gene_name=LOC124905303;gene_sources=liftoff;ID=HG01358_ch_G0000167;Name=LOC124905303
HG01358_chrY	CAT	transcript	18382855	18389715	1000	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01358_ch_T0000486;gene_id=HG01358_ch_G0000167;Parent=HG01358_ch_G0000167;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=HG01358_ch_T0000486;Name=LOC124905303
HG01358_chrY	CAT	exon	18382855	18386799	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01358_ch_T0000486;gene_id=HG01358_ch_G0000167;Parent=HG01358_ch_T0000486;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG01358_ch_T0000486:0;Name=LOC124905303;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18386800	18386887	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01358_ch_T0000486;gene_id=HG01358_ch_G0000167;Parent=HG01358_ch_T0000486;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG01358_ch_T0000486:0;Name=LOC124905303;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18386888	18387636	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01358_ch_T0000486;gene_id=HG01358_ch_G0000167;Parent=HG01358_ch_T0000486;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG01358_ch_T0000486:1;Name=LOC124905303;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18387637	18387723	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01358_ch_T0000486;gene_id=HG01358_ch_G0000167;Parent=HG01358_ch_T0000486;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG01358_ch_T0000486:1;Name=LOC124905303;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18387724	18389715	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01358_ch_T0000486;gene_id=HG01358_ch_G0000167;Parent=HG01358_ch_T0000486;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG01358_ch_T0000486:2;Name=LOC124905303;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18458900	18460480	.	-	.	source_gene_common_name=XKRY2;source_gene=hg002_chrY_paternal_380;alternative_source_transcripts=hg002_chrY_paternal_358.1;gene_id=HG01358_ch_G0000168;gene_biotype=transcribed_pseudogene;gene_name=XKRY2;gene_sources=liftoff;ID=HG01358_ch_G0000168;Name=XKRY2
HG01358_chrY	CAT	transcript	18458900	18460480	1000	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1;transcript_id=HG01358_ch_T0000487;gene_id=HG01358_ch_G0000168;Parent=HG01358_ch_G0000168;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=HG01358_ch_T0000487;Name=XKRY2
HG01358_chrY	CAT	exon	18458900	18460480	.	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1;transcript_id=HG01358_ch_T0000487;gene_id=HG01358_ch_G0000168;Parent=HG01358_ch_T0000487;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=exon:HG01358_ch_T0000487:0;Name=XKRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18615656	18622516	.	+	.	source_gene_common_name=LOC124905302;source_gene=hg002_chrY_paternal_385;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;gene_id=HG01358_ch_G0000169;gene_biotype=lncRNA;gene_name=LOC124905302;gene_sources=liftoff;ID=HG01358_ch_G0000169;Name=LOC124905302
HG01358_chrY	CAT	transcript	18615656	18622516	1000	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01358_ch_T0000488;gene_id=HG01358_ch_G0000169;Parent=HG01358_ch_G0000169;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=HG01358_ch_T0000488;Name=LOC124905302
HG01358_chrY	CAT	exon	18615656	18617647	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01358_ch_T0000488;gene_id=HG01358_ch_G0000169;Parent=HG01358_ch_T0000488;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG01358_ch_T0000488:0;Name=LOC124905302;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18617648	18617734	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01358_ch_T0000488;gene_id=HG01358_ch_G0000169;Parent=HG01358_ch_T0000488;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG01358_ch_T0000488:0;Name=LOC124905302;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18617735	18618483	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01358_ch_T0000488;gene_id=HG01358_ch_G0000169;Parent=HG01358_ch_T0000488;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG01358_ch_T0000488:1;Name=LOC124905302;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18618484	18618571	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01358_ch_T0000488;gene_id=HG01358_ch_G0000169;Parent=HG01358_ch_T0000488;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG01358_ch_T0000488:1;Name=LOC124905302;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18618572	18622516	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01358_ch_T0000488;gene_id=HG01358_ch_G0000169;Parent=HG01358_ch_T0000488;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG01358_ch_T0000488:2;Name=LOC124905302;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18626134	18626934	.	+	.	source_gene_common_name=LOC105377218;source_gene=hg002_chrY_paternal_386;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;gene_id=HG01358_ch_G0000170;gene_biotype=lncRNA;gene_name=LOC105377218;gene_sources=liftoff;ID=HG01358_ch_G0000170;Name=LOC105377218
HG01358_chrY	CAT	transcript	18626134	18626934	1000	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01358_ch_T0000489;gene_id=HG01358_ch_G0000170;Parent=HG01358_ch_G0000170;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=HG01358_ch_T0000489;Name=LOC105377218
HG01358_chrY	CAT	exon	18626134	18626216	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01358_ch_T0000489;gene_id=HG01358_ch_G0000170;Parent=HG01358_ch_T0000489;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG01358_ch_T0000489:0;Name=LOC105377218;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18626217	18626303	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01358_ch_T0000489;gene_id=HG01358_ch_G0000170;Parent=HG01358_ch_T0000489;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG01358_ch_T0000489:0;Name=LOC105377218;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18626304	18626389	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01358_ch_T0000489;gene_id=HG01358_ch_G0000170;Parent=HG01358_ch_T0000489;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG01358_ch_T0000489:1;Name=LOC105377218;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18626390	18626477	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01358_ch_T0000489;gene_id=HG01358_ch_G0000170;Parent=HG01358_ch_T0000489;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG01358_ch_T0000489:1;Name=LOC105377218;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18626478	18626934	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01358_ch_T0000489;gene_id=HG01358_ch_G0000170;Parent=HG01358_ch_T0000489;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG01358_ch_T0000489:2;Name=LOC105377218;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18735997	18740288	.	+	.	source_gene_common_name=FAM224B;source_gene=hg002_chrY_paternal_389;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;gene_id=HG01358_ch_G0000171;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG01358_ch_G0000171;Name=FAM224B
HG01358_chrY	CAT	transcript	18735997	18740288	1000	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01358_ch_T0000490;gene_id=HG01358_ch_G0000171;Parent=HG01358_ch_G0000171;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=HG01358_ch_T0000490;Name=FAM224B
HG01358_chrY	CAT	exon	18735997	18736133	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01358_ch_T0000490;gene_id=HG01358_ch_G0000171;Parent=HG01358_ch_T0000490;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG01358_ch_T0000490:0;Name=FAM224B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18736134	18738628	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01358_ch_T0000490;gene_id=HG01358_ch_G0000171;Parent=HG01358_ch_T0000490;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG01358_ch_T0000490:0;Name=FAM224B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18738629	18738746	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01358_ch_T0000490;gene_id=HG01358_ch_G0000171;Parent=HG01358_ch_T0000490;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG01358_ch_T0000490:1;Name=FAM224B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18738747	18740081	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01358_ch_T0000490;gene_id=HG01358_ch_G0000171;Parent=HG01358_ch_T0000490;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG01358_ch_T0000490:1;Name=FAM224B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18740082	18740288	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01358_ch_T0000490;gene_id=HG01358_ch_G0000171;Parent=HG01358_ch_T0000490;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG01358_ch_T0000490:2;Name=FAM224B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18756612	18761306	.	+	.	source_gene_common_name=LOC105377220;source_gene=hg002_chrY_paternal_391;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;gene_id=HG01358_ch_G0000172;gene_biotype=lncRNA;gene_name=LOC105377220;gene_sources=liftoff;ID=HG01358_ch_G0000172;Name=LOC105377220
HG01358_chrY	CAT	transcript	18756612	18761306	1000	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01358_ch_T0000491;gene_id=HG01358_ch_G0000172;Parent=HG01358_ch_G0000172;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=HG01358_ch_T0000491;Name=LOC105377220
HG01358_chrY	CAT	exon	18756612	18757386	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01358_ch_T0000491;gene_id=HG01358_ch_G0000172;Parent=HG01358_ch_T0000491;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG01358_ch_T0000491:0;Name=LOC105377220;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18757387	18758600	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01358_ch_T0000491;gene_id=HG01358_ch_G0000172;Parent=HG01358_ch_T0000491;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG01358_ch_T0000491:0;Name=LOC105377220;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18758601	18758729	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01358_ch_T0000491;gene_id=HG01358_ch_G0000172;Parent=HG01358_ch_T0000491;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG01358_ch_T0000491:1;Name=LOC105377220;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18758730	18759439	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01358_ch_T0000491;gene_id=HG01358_ch_G0000172;Parent=HG01358_ch_T0000491;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG01358_ch_T0000491:1;Name=LOC105377220;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18759440	18761306	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01358_ch_T0000491;gene_id=HG01358_ch_G0000172;Parent=HG01358_ch_T0000491;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG01358_ch_T0000491:2;Name=LOC105377220;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18798710	18814486	.	-	.	source_gene_common_name=FAM41AY1;source_gene=hg002_chrY_paternal_394;alternative_source_transcripts=hg002_chrY_paternal_394.1;gene_id=HG01358_ch_G0000173;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=HG01358_ch_G0000173;Name=FAM41AY1
HG01358_chrY	CAT	transcript	18798710	18814486	1000	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_G0000173;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=HG01358_ch_T0000492;Name=FAM41AY1
HG01358_chrY	CAT	exon	18798710	18799436	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18799437	18799518	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18799519	18799740	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18799741	18799952	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18799953	18800140	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18800141	18800433	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18800434	18800643	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18800644	18800917	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18800918	18801011	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18801012	18801120	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18801121	18801291	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18801292	18801884	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18801885	18801978	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18801979	18802225	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18802226	18802354	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18802355	18813683	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18813684	18813733	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18813734	18814328	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01358_ch_T0000492:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18814329	18814486	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG01358_ch_T0000492;gene_id=HG01358_ch_G0000173;Parent=HG01358_ch_T0000492;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01358_ch_T0000492:9;Name=FAM41AY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18895944	18896105	.	+	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=HG01358_ch_G0000174;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=HG01358_ch_G0000174;Name=LOC124905307
HG01358_chrY	CAT	transcript	18895944	18896105	1000	+	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG01358_ch_T0000493;gene_id=HG01358_ch_G0000174;Parent=HG01358_ch_G0000174;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=HG01358_ch_T0000493;Name=LOC124905307
HG01358_chrY	CAT	exon	18895944	18896105	.	+	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG01358_ch_T0000493;gene_id=HG01358_ch_G0000174;Parent=HG01358_ch_T0000493;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:HG01358_ch_T0000493:0;Name=LOC124905307;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18939061	18998403	.	+	.	source_gene_common_name=HSFY1;source_gene=hg002_chrY_paternal_403;alternative_source_transcripts=hg002_chrY_paternal_403.1;gene_id=HG01358_ch_G0000175;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000175;Name=HSFY1
HG01358_chrY	CAT	transcript	18939061	18958011	100	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_G0000175;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG01358_ch_T0000494;Name=HSFY1
HG01358_chrY	CAT	exon	18939061	18939255	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000494:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18939230	18939255	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000494:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	18939230	18939232	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG01358_ch_T0000494;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18939256	18956451	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01358_ch_T0000494:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18956452	18956719	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000494:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18956452	18956719	.	+	1	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000494:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18956720	18957197	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01358_ch_T0000494:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18957198	18958011	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000494:2;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18957198	18957890	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000494:2;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	18957888	18957890	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000494;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000494;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG01358_ch_T0000494;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	18956100	18958011	100	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_G0000175;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG01358_ch_T0000495;Name=HSFY1
HG01358_chrY	CAT	exon	18956100	18956353	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000495:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18956343	18956353	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000495:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	18956343	18956345	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG01358_ch_T0000495;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18956354	18956451	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01358_ch_T0000495:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18956452	18956719	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000495:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18956452	18956719	.	+	1	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000495:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18956720	18957197	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01358_ch_T0000495:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18957198	18958011	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000495:2;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18957198	18957890	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000495:2;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	18957888	18957890	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000495;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000495;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG01358_ch_T0000495;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	18956110	18998403	100	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000496;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_G0000175;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG01358_ch_T0000496;Name=HSFY1
HG01358_chrY	CAT	exon	18956110	18956719	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000496;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000496;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000496:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18956207	18956719	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000496;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000496;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000496:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	18956207	18956209	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000496;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000496;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG01358_ch_T0000496;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18956720	18997975	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000496;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000496;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01358_ch_T0000496:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18997976	18998403	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000496;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000496;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000496:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18997976	18998074	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000496;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000496;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000496:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	18998072	18998074	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000496;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000496;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG01358_ch_T0000496;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	18956110	18961497	1000	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000497;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_G0000175;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG01358_ch_T0000497;Name=HSFY1
HG01358_chrY	CAT	exon	18956110	18956719	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000497;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000497;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000497:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18956720	18959532	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000497;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000497;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01358_ch_T0000497:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18959533	18959642	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000497;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000497;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000497:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18959643	18960207	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000497;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000497;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01358_ch_T0000497:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18960208	18960294	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000497;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000497;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000497:2;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18960295	18961341	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000497;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000497;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01358_ch_T0000497:2;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18961342	18961497	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000497;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000497;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000497:3;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	18956110	18998403	1000	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_G0000175;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG01358_ch_T0000498;Name=HSFY1
HG01358_chrY	CAT	exon	18956110	18956719	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000498:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18956720	18959532	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01358_ch_T0000498:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18959533	18959642	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000498:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18959643	18960207	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01358_ch_T0000498:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18960208	18960294	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000498:2;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18960295	18961341	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01358_ch_T0000498:2;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18961342	18961496	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000498:3;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18961497	18992112	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01358_ch_T0000498:3;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18992113	18992198	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000498:4;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18992199	18997975	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01358_ch_T0000498:4;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18997976	18998403	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000498;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000498;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01358_ch_T0000498:5;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	18956139	18958011	100	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000499;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_G0000175;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG01358_ch_T0000499;Name=HSFY1
HG01358_chrY	CAT	exon	18956139	18956719	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000499;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000499;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000499:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18956207	18956719	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000499;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000499;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000499:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	18956207	18956209	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000499;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000499;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG01358_ch_T0000499;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18956720	18957197	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000499;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000499;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01358_ch_T0000499:0;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18957198	18958011	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000499;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000499;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01358_ch_T0000499:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	18957198	18957890	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000499;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000499;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01358_ch_T0000499:1;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	18957888	18957890	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000499;gene_id=HG01358_ch_G0000175;Parent=HG01358_ch_T0000499;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG01358_ch_T0000499;Name=HSFY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	18990646	18999961	.	-	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_407.1;gene_id=HG01358_ch_G0000176;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=HG01358_ch_G0000176;Name=TTTY9A
HG01358_chrY	CAT	transcript	18990646	18999961	1000	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_G0000176;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=HG01358_ch_T0000500;Name=TTTY9A
HG01358_chrY	CAT	exon	18990646	18991788	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01358_ch_T0000500:0;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18991789	18996851	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG01358_ch_T0000500:0;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18996852	18996988	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01358_ch_T0000500:1;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18996989	18997570	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG01358_ch_T0000500:1;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18997571	18997684	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01358_ch_T0000500:2;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18997685	18998045	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG01358_ch_T0000500:2;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18998046	18998146	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01358_ch_T0000500:3;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	18998147	18999819	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG01358_ch_T0000500:3;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	18999820	18999961	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1;transcript_id=HG01358_ch_T0000500;gene_id=HG01358_ch_G0000176;Parent=HG01358_ch_T0000500;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01358_ch_T0000500:4;Name=TTTY9A;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	19139323	19148638	.	+	.	source_gene_common_name=TTTY9B;source_gene=hg002_chrY_paternal_407;alternative_source_transcripts=hg002_chrY_paternal_412.1;gene_id=HG01358_ch_G0000177;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG01358_ch_G0000177;Name=TTTY9B
HG01358_chrY	CAT	transcript	19139323	19148638	1000	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_G0000177;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=HG01358_ch_T0000501;Name=TTTY9B
HG01358_chrY	CAT	exon	19139323	19139464	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01358_ch_T0000501:0;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19139465	19141137	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG01358_ch_T0000501:0;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19141138	19141238	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01358_ch_T0000501:1;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19141239	19141599	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG01358_ch_T0000501:1;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19141600	19141713	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01358_ch_T0000501:2;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19141714	19142295	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG01358_ch_T0000501:2;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19142296	19142432	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01358_ch_T0000501:3;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19142433	19147495	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG01358_ch_T0000501:3;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19147496	19148638	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_412.1;transcript_id=HG01358_ch_T0000501;gene_id=HG01358_ch_G0000177;Parent=HG01358_ch_T0000501;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01358_ch_T0000501:4;Name=TTTY9B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	19140881	19200218	.	-	.	source_gene_common_name=HSFY2;source_gene=hg002_chrY_paternal_413;alternative_source_transcripts=hg002_chrY_paternal_413.1;gene_id=HG01358_ch_G0000178;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000178;Name=HSFY2
HG01358_chrY	CAT	transcript	19140881	19183189	100	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000502;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_G0000178;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01358_ch_T0000502;Name=HSFY2
HG01358_chrY	CAT	exon	19140881	19141308	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000502;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000502;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000502:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19141210	19141308	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000502;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000502;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000502:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	19141210	19141212	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000502;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000502;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01358_ch_T0000502;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19141309	19182559	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000502;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000502;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01358_ch_T0000502:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19182560	19183189	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000502;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000502;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000502:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19182560	19183072	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000502;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000502;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000502:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	19183070	19183072	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000502;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000502;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01358_ch_T0000502;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19140881	19183189	1000	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_G0000178;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=HG01358_ch_T0000503;Name=HSFY2
HG01358_chrY	CAT	exon	19140881	19141308	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01358_ch_T0000503:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19141309	19147085	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01358_ch_T0000503:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19147086	19147171	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01358_ch_T0000503:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19147172	19177785	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01358_ch_T0000503:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19177786	19177940	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01358_ch_T0000503:2;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19177941	19178987	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01358_ch_T0000503:2;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19178988	19179074	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01358_ch_T0000503:3;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19179075	19179637	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01358_ch_T0000503:3;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19179638	19179747	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01358_ch_T0000503:4;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19179748	19182559	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01358_ch_T0000503:4;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19182560	19183189	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000503;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000503;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01358_ch_T0000503:5;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19178963	19183189	100	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_G0000178;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01358_ch_T0000504;Name=HSFY2
HG01358_chrY	CAT	exon	19178963	19179074	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000504:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19179053	19179074	.	-	1	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000504:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	19179053	19179055	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01358_ch_T0000504;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19179075	19179637	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01358_ch_T0000504:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19179638	19179747	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000504:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19179638	19179747	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000504:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19179748	19182559	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01358_ch_T0000504:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19182560	19183189	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000504:2;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19182560	19183072	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000504:2;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	19183070	19183072	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000504;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000504;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01358_ch_T0000504;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19181268	19183180	100	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_G0000178;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01358_ch_T0000505;Name=HSFY2
HG01358_chrY	CAT	exon	19181268	19182081	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000505:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19181389	19182081	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000505:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	19181389	19181391	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01358_ch_T0000505;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19182082	19182559	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01358_ch_T0000505:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19182560	19182827	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000505:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19182560	19182827	.	-	1	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000505:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19182828	19182925	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01358_ch_T0000505:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19182926	19183180	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000505:2;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19182926	19182936	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000505:2;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	19182934	19182936	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000505;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000505;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01358_ch_T0000505;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19181268	19183189	100	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000506;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_G0000178;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01358_ch_T0000506;Name=HSFY2
HG01358_chrY	CAT	exon	19181268	19182081	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000506;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000506;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000506:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19181389	19182081	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000506;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000506;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000506:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	19181389	19181391	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000506;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000506;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01358_ch_T0000506;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19182082	19182559	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000506;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000506;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01358_ch_T0000506:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19182560	19183189	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000506;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000506;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000506:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19182560	19183072	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000506;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000506;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000506:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	19183070	19183072	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000506;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000506;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01358_ch_T0000506;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19181268	19200218	100	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_G0000178;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01358_ch_T0000507;Name=HSFY2
HG01358_chrY	CAT	exon	19181268	19182081	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000507:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19181389	19182081	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000507:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	19181389	19181391	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01358_ch_T0000507;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19182082	19182559	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01358_ch_T0000507:0;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19182560	19182827	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000507:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19182560	19182827	.	-	1	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000507:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19182828	19200023	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01358_ch_T0000507:1;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19200024	19200218	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01358_ch_T0000507:2;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19200024	19200049	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01358_ch_T0000507:2;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	19200047	19200049	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000507;gene_id=HG01358_ch_G0000178;Parent=HG01358_ch_T0000507;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01358_ch_T0000507;Name=HSFY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	19281959	19487005	.	-	.	source_gene_common_name=TTTY14;source_gene=hg002_chrY_paternal_425;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;gene_id=HG01358_ch_G0000179;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=HG01358_ch_G0000179;Name=TTTY14
HG01358_chrY	CAT	transcript	19281959	19485461	1000	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_G0000179;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01358_ch_T0000508;Name=TTTY14
HG01358_chrY	CAT	exon	19281959	19282292	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000508:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19282293	19286525	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000508:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19286526	19286663	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000508:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19286664	19321825	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000508:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19321826	19321940	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000508:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19321941	19478181	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000508:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19478182	19478256	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000508:3;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19478257	19485398	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000508:3;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19485399	19485461	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01358_ch_T0000508;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000508;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000508:4;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19281959	19485487	1000	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01358_ch_T0000509;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_G0000179;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01358_ch_T0000509;Name=TTTY14
HG01358_chrY	CAT	exon	19281959	19282292	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01358_ch_T0000509;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000509;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000509:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19282293	19286525	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01358_ch_T0000509;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000509;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000509:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19286526	19286663	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01358_ch_T0000509;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000509;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000509:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19286664	19482956	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01358_ch_T0000509;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000509;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000509:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19482957	19483019	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01358_ch_T0000509;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000509;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000509:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19483020	19485398	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01358_ch_T0000509;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000509;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000509:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19485399	19485487	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01358_ch_T0000509;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000509;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000509:3;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19281959	19487005	1000	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_G0000179;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01358_ch_T0000510;Name=TTTY14
HG01358_chrY	CAT	exon	19281959	19282292	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000510:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19282293	19342199	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000510:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19342200	19342298	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000510:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19342299	19342813	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000510:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19342814	19342932	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000510:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19342933	19478181	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000510:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19478182	19478256	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000510:3;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19478257	19486502	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000510:3;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19486503	19487005	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01358_ch_T0000510;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000510;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000510:4;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19281959	19487005	1000	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01358_ch_T0000511;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_G0000179;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01358_ch_T0000511;Name=TTTY14
HG01358_chrY	CAT	exon	19281959	19282292	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01358_ch_T0000511;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000511;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000511:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19282293	19286525	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01358_ch_T0000511;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000511;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000511:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19286526	19286663	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01358_ch_T0000511;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000511;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000511:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19286664	19478181	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01358_ch_T0000511;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000511;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000511:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19478182	19478256	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01358_ch_T0000511;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000511;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000511:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19478257	19486502	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01358_ch_T0000511;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000511;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000511:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19486503	19487005	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01358_ch_T0000511;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000511;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000511:3;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19281959	19487005	1000	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01358_ch_T0000512;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_G0000179;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01358_ch_T0000512;Name=TTTY14
HG01358_chrY	CAT	exon	19281959	19282292	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01358_ch_T0000512;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000512;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000512:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19282293	19286525	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01358_ch_T0000512;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000512;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000512:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19286526	19286663	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01358_ch_T0000512;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000512;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000512:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19286664	19486502	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01358_ch_T0000512;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000512;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000512:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19486503	19487005	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01358_ch_T0000512;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000512;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000512:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19341464	19485487	1000	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_G0000179;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01358_ch_T0000513;Name=TTTY14
HG01358_chrY	CAT	exon	19341464	19342298	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000513:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19342299	19453999	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000513:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19454000	19454153	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000513:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19454154	19454699	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000513:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19454700	19454749	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000513:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19454750	19478181	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000513:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19478182	19478256	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000513:3;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19478257	19485398	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000513:3;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19485399	19485487	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01358_ch_T0000513;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000513;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000513:4;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19341908	19485461	1000	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01358_ch_T0000514;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_G0000179;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01358_ch_T0000514;Name=TTTY14
HG01358_chrY	CAT	exon	19341908	19342298	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01358_ch_T0000514;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000514;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000514:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19342299	19478181	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01358_ch_T0000514;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000514;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000514:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19478182	19478256	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01358_ch_T0000514;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000514;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000514:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19478257	19485398	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01358_ch_T0000514;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000514;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000514:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19485399	19485461	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01358_ch_T0000514;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000514;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000514:2;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19341908	19487005	1000	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG01358_ch_T0000515;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_G0000179;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01358_ch_T0000515;Name=TTTY14
HG01358_chrY	CAT	exon	19341908	19342298	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG01358_ch_T0000515;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000515;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000515:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19342299	19486502	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG01358_ch_T0000515;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000515;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01358_ch_T0000515:0;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19486503	19487005	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG01358_ch_T0000515;gene_id=HG01358_ch_G0000179;Parent=HG01358_ch_T0000515;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01358_ch_T0000515:1;Name=TTTY14;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	19489314	19498336	.	+	.	source_gene_common_name=LOC124905306;source_gene=hg002_chrY_paternal_429;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;gene_id=HG01358_ch_G0000180;gene_biotype=lncRNA;gene_name=LOC124905306;gene_sources=liftoff;ID=HG01358_ch_G0000180;Name=LOC124905306
HG01358_chrY	CAT	transcript	19489314	19498336	1000	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG01358_ch_T0000516;gene_id=HG01358_ch_G0000180;Parent=HG01358_ch_G0000180;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=HG01358_ch_T0000516;Name=LOC124905306
HG01358_chrY	CAT	exon	19489314	19490183	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG01358_ch_T0000516;gene_id=HG01358_ch_G0000180;Parent=HG01358_ch_T0000516;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG01358_ch_T0000516:0;Name=LOC124905306;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19490184	19495957	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG01358_ch_T0000516;gene_id=HG01358_ch_G0000180;Parent=HG01358_ch_T0000516;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=intron:HG01358_ch_T0000516:0;Name=LOC124905306;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19495958	19498336	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG01358_ch_T0000516;gene_id=HG01358_ch_G0000180;Parent=HG01358_ch_T0000516;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG01358_ch_T0000516:1;Name=LOC124905306;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	19864883	19912605	.	-	.	source_gene_common_name=BCORP1;source_gene=hg002_chrY_paternal_431;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;gene_id=HG01358_ch_G0000181;gene_biotype=transcribed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG01358_ch_G0000181;Name=BCORP1
HG01358_chrY	CAT	transcript	19864883	19912605	1000	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_G0000181;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG01358_ch_T0000517;Name=BCORP1
HG01358_chrY	CAT	exon	19864883	19866316	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:0;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19866317	19868370	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000517:0;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19868371	19868526	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:1;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19868527	19868735	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000517:1;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19868736	19868813	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:2;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19868814	19874552	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000517:2;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19874553	19874674	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:3;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19874675	19875902	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000517:3;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19875903	19876821	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:4;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19876822	19883351	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000517:4;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19883352	19883591	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:5;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19883592	19884086	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000517:5;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19884087	19884350	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:6;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19884351	19889615	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000517:6;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19889616	19889741	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:7;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19889742	19912483	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000517:7;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19912484	19912605	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01358_ch_T0000517;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000517;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000517:8;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19864883	19912605	1000	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_G0000181;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG01358_ch_T0000518;Name=BCORP1
HG01358_chrY	CAT	exon	19864883	19866316	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:0;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19866317	19866508	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:0;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19866509	19866569	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:1;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19866570	19868370	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:1;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19868371	19868526	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:2;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19868527	19868735	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:2;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19868736	19868813	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:3;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19868814	19869405	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:3;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19869406	19869551	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:4;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19869552	19874552	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:4;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19874553	19874674	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:5;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19874675	19875902	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:5;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19875903	19876821	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:6;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19876822	19883351	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:6;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19883352	19883591	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:7;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19883592	19884086	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:7;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19884087	19884350	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:8;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19884351	19889615	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:8;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19889616	19889741	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:9;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19889742	19912483	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01358_ch_T0000518:9;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19912484	19912605	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01358_ch_T0000518;gene_id=HG01358_ch_G0000181;Parent=HG01358_ch_T0000518;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01358_ch_T0000518:10;Name=BCORP1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	19891063	19892902	.	-	.	source_gene_common_name=LOC102723934;source_gene=hg002_chrY_paternal_432;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;gene_id=HG01358_ch_G0000182;gene_biotype=protein_coding;gene_name=LOC102723934;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000182;Name=LOC102723934
HG01358_chrY	CAT	transcript	19891063	19892902	100	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_G0000182;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=HG01358_ch_T0000519;Name=LOC102723934
HG01358_chrY	CAT	exon	19891063	19891451	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG01358_ch_T0000519:0;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19891063	19891451	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG01358_ch_T0000519:0;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	19891063	19891065	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=stop_codon:HG01358_ch_T0000519;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19891452	19891763	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG01358_ch_T0000519:0;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19891764	19891775	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG01358_ch_T0000519:1;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19891764	19891775	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG01358_ch_T0000519:1;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19891776	19891855	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG01358_ch_T0000519:1;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19891856	19892902	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG01358_ch_T0000519:2;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	19891856	19892879	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG01358_ch_T0000519:2;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	19892877	19892879	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000519;gene_id=HG01358_ch_G0000182;Parent=HG01358_ch_T0000519;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=start_codon:HG01358_ch_T0000519;Name=LOC102723934;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	19963352	19976462	.	-	.	source_gene_common_name=LOC105377223;source_gene=hg002_chrY_paternal_433;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;gene_id=HG01358_ch_G0000183;gene_biotype=lncRNA;gene_name=LOC105377223;gene_sources=liftoff;ID=HG01358_ch_G0000183;Name=LOC105377223
HG01358_chrY	CAT	transcript	19963352	19976462	1000	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01358_ch_T0000520;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_G0000183;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01358_ch_T0000520;Name=LOC105377223
HG01358_chrY	CAT	exon	19963352	19966265	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01358_ch_T0000520;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000520;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000520:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966266	19966682	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01358_ch_T0000520;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000520;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000520:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19966683	19966742	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01358_ch_T0000520;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000520;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000520:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966743	19967476	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01358_ch_T0000520;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000520;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000520:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19967477	19967593	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01358_ch_T0000520;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000520;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000520:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19967594	19976434	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01358_ch_T0000520;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000520;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000520:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19976435	19976462	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01358_ch_T0000520;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000520;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000520:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19963352	19976462	1000	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01358_ch_T0000521;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_G0000183;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01358_ch_T0000521;Name=LOC105377223
HG01358_chrY	CAT	exon	19963352	19966265	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01358_ch_T0000521;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000521;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000521:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966266	19966682	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01358_ch_T0000521;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000521;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000521:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19966683	19966742	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01358_ch_T0000521;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000521;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000521:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966743	19967492	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01358_ch_T0000521;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000521;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000521:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19967493	19967593	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01358_ch_T0000521;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000521;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000521:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19967594	19976434	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01358_ch_T0000521;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000521;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000521:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19976435	19976462	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01358_ch_T0000521;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000521;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000521:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19963352	19976462	1000	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01358_ch_T0000522;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_G0000183;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01358_ch_T0000522;Name=LOC105377223
HG01358_chrY	CAT	exon	19963352	19966265	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01358_ch_T0000522;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000522;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000522:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966266	19966682	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01358_ch_T0000522;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000522;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000522:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19966683	19966742	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01358_ch_T0000522;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000522;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000522:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966743	19967476	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01358_ch_T0000522;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000522;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000522:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19967477	19967593	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01358_ch_T0000522;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000522;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000522:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19967594	19968792	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01358_ch_T0000522;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000522;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000522:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19968793	19976462	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01358_ch_T0000522;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000522;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000522:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19963352	19976462	1000	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01358_ch_T0000523;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_G0000183;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01358_ch_T0000523;Name=LOC105377223
HG01358_chrY	CAT	exon	19963352	19965007	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01358_ch_T0000523;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000523;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000523:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19965008	19966682	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01358_ch_T0000523;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000523;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000523:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19966683	19966742	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01358_ch_T0000523;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000523;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000523:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966743	19967492	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01358_ch_T0000523;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000523;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000523:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19967493	19967593	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01358_ch_T0000523;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000523;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000523:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19967594	19968792	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01358_ch_T0000523;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000523;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000523:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19968793	19976462	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01358_ch_T0000523;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000523;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000523:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19963352	19976462	1000	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01358_ch_T0000524;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_G0000183;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01358_ch_T0000524;Name=LOC105377223
HG01358_chrY	CAT	exon	19963352	19965007	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01358_ch_T0000524;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000524;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000524:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19965008	19966682	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01358_ch_T0000524;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000524;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000524:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19966683	19966742	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01358_ch_T0000524;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000524;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000524:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966743	19967476	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01358_ch_T0000524;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000524;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000524:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19967477	19967593	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01358_ch_T0000524;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000524;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000524:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19967594	19976434	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01358_ch_T0000524;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000524;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000524:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19976435	19976462	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01358_ch_T0000524;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000524;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000524:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19963352	19976462	1000	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01358_ch_T0000525;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_G0000183;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01358_ch_T0000525;Name=LOC105377223
HG01358_chrY	CAT	exon	19963352	19966742	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01358_ch_T0000525;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000525;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000525:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966743	19967476	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01358_ch_T0000525;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000525;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000525:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19967477	19967593	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01358_ch_T0000525;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000525;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000525:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19967594	19968792	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01358_ch_T0000525;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000525;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000525:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19968793	19976462	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01358_ch_T0000525;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000525;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000525:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19963352	19976462	1000	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01358_ch_T0000526;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_G0000183;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01358_ch_T0000526;Name=LOC105377223
HG01358_chrY	CAT	exon	19963352	19966742	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01358_ch_T0000526;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000526;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000526:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19966743	19967476	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01358_ch_T0000526;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000526;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000526:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19967477	19967593	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01358_ch_T0000526;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000526;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000526:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19967594	19976434	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01358_ch_T0000526;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000526;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01358_ch_T0000526:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19976435	19976462	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01358_ch_T0000526;gene_id=HG01358_ch_G0000183;Parent=HG01358_ch_T0000526;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01358_ch_T0000526:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	19976811	20016623	.	+	.	source_gene_common_name=TXLNGY;source_gene=hg002_chrY_paternal_434;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;gene_id=HG01358_ch_G0000184;gene_biotype=transcribed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG01358_ch_G0000184;Name=TXLNGY
HG01358_chrY	CAT	transcript	19976811	19999876	1000	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01358_ch_T0000527;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_G0000184;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG01358_ch_T0000527;Name=TXLNGY
HG01358_chrY	CAT	exon	19976811	19976935	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01358_ch_T0000527;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000527;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000527:0;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19976936	19996662	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01358_ch_T0000527;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000527;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000527:0;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19996663	19996960	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01358_ch_T0000527;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000527;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000527:1;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19996961	19998973	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01358_ch_T0000527;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000527;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000527:1;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19998974	19999065	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01358_ch_T0000527;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000527;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000527:2;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19999066	19999535	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01358_ch_T0000527;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000527;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000527:2;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19999536	19999876	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01358_ch_T0000527;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000527;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000527:3;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	19976811	20016623	1000	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_G0000184;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG01358_ch_T0000528;Name=TXLNGY
HG01358_chrY	CAT	exon	19976811	19976935	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:0;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19976936	19996662	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:0;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19996663	19996960	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:1;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19996961	19998973	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:1;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	19998974	19999065	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:2;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	19999066	20001232	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:2;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20001233	20001412	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:3;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20001413	20002851	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:3;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20002852	20003046	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:4;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20003047	20005467	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:4;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20005468	20005587	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:5;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20005588	20007043	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:5;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20007044	20007118	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:6;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20007119	20009191	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:6;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20009192	20009284	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:7;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20009285	20011668	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:7;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20011669	20011764	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:8;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20011765	20013249	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01358_ch_T0000528:8;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20013250	20016623	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01358_ch_T0000528;gene_id=HG01358_ch_G0000184;Parent=HG01358_ch_T0000528;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01358_ch_T0000528:9;Name=TXLNGY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	20113320	20154181	.	-	.	source_gene_common_name=KDM5D;source_gene=hg002_chrY_paternal_435;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;gene_id=HG01358_ch_G0000185;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000185;Name=KDM5D
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000529;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000529;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117698	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117699	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117699	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119264	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119264	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119265	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20132795	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20132796	20132888	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20132796	20132888	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20132889	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:26;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000529:26;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000529;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000529:26;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000529;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000529;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000529:27;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000530;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000530;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117776	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117777	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117777	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119033	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119033	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119034	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000530:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000530;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000530:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000530;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000530;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000530:26;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000531;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000531;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117698	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117699	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117699	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119033	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119033	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119034	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000531:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000531;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000531:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000531;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000531;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000531:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000532;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000532;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117776	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117777	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117777	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119033	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119033	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119034	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000532:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000532;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000532:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000532;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000532;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000532:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000533;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000533;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117698	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117699	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117699	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119264	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119264	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119265	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000533:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000533;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000533:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000533;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000533;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000533:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000534;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000534;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117698	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117699	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117699	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119264	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119264	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119265	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000534:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000534;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000534:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000534;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000534;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000534:26;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000535;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000535;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117698	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117699	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117699	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119264	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119264	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119265	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000535:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000535;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000535:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000535;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000535;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000535:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000536;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000536;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117698	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117699	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117699	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119033	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119033	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119034	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000536:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000536;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000536:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000536;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000536;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000536:26;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000537;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000537;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117776	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117777	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117777	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119264	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119264	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119265	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000537:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000537;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000537:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000537;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000537;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000537:26;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20113320	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000538;Name=KDM5D
HG01358_chrY	CAT	exon	20113320	20115800	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115450	20115800	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20115450	20115452	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000538;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20115801	20115895	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20115896	20116095	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20115896	20116095	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116096	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117776	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117777	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117777	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119264	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119264	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119265	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000538:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000538;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000538:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000538;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000538;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000538:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20115933	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000539;Name=KDM5D
HG01358_chrY	CAT	exon	20115933	20116063	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116035	20116063	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20116035	20116037	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000539;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116064	20116248	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116249	20116318	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116249	20116318	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20116319	20116601	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20116602	20117201	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20116602	20117201	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117202	20117388	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117389	20117526	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117389	20117526	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117527	20117698	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20117699	20117878	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20117699	20117878	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20117879	20118329	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118330	20118468	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118330	20118468	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20118469	20118905	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20118906	20119264	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20118906	20119264	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119265	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:20;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:21;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:22;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:23;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000539:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000539;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000539:24;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000539;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000539;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000539:25;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20118915	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000540;Name=KDM5D
HG01358_chrY	CAT	exon	20118915	20119715	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119632	20119715	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20119632	20119634	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000540;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119716	20119830	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20119831	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20119831	20119927	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20124806	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20124807	20124954	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20124807	20124954	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20124955	20125069	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125070	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125070	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000540:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000540;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000540:18;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000540;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000540;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000540:19;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20119855	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000541;Name=KDM5D
HG01358_chrY	CAT	exon	20119855	20119927	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20119928	20125038	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125039	20125194	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125062	20125194	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20125062	20125064	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000541;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125195	20125277	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125278	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125278	20125459	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000541:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000541;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000541:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000541;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000541;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000541:17;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20125326	20154181	100	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_G0000185;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01358_ch_T0000542;Name=KDM5D
HG01358_chrY	CAT	exon	20125326	20125459	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125443	20125459	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	20125443	20125445	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01358_ch_T0000542;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125460	20125553	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:0;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125554	20125566	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125554	20125566	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125567	20125733	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:1;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20125734	20125928	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20125734	20125928	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20125929	20126050	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:2;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20126051	20126170	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20126051	20126170	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20126171	20130326	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:3;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130327	20130489	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130327	20130489	.	-	1	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130490	20130584	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:4;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20130585	20130766	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20130585	20130766	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20130767	20141226	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:5;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141227	20141385	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141227	20141385	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141386	20141500	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:6;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20141501	20141620	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20141501	20141620	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20141621	20142038	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:7;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20142039	20142197	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20142039	20142197	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20142198	20144806	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:8;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20144807	20144952	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20144807	20144952	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20144953	20145075	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:9;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20145076	20145205	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20145076	20145205	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20145206	20148982	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:10;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20148983	20149117	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20148983	20149117	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20149118	20150772	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:11;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20150773	20150943	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20150773	20150943	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20150944	20151189	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:12;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20151190	20151312	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20151190	20151312	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20151313	20152616	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:13;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20152617	20152694	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20152617	20152694	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20152695	20153839	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:14;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20153840	20154008	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	20153840	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01358_ch_T0000542:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	20153987	20153989	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01358_ch_T0000542;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20154009	20154125	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01358_ch_T0000542:15;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20154126	20154181	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000542;gene_id=HG01358_ch_G0000185;Parent=HG01358_ch_T0000542;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01358_ch_T0000542:16;Name=KDM5D;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	20154211	20166904	.	+	.	source_gene_common_name=LOC105377224;source_gene=hg002_chrY_paternal_436;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;gene_id=HG01358_ch_G0000186;gene_biotype=lncRNA;gene_name=LOC105377224;gene_sources=liftoff;ID=HG01358_ch_G0000186;Name=LOC105377224
HG01358_chrY	CAT	transcript	20154211	20167011	1000	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01358_ch_T0000543;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_G0000186;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG01358_ch_T0000543;Name=LOC105377224
HG01358_chrY	CAT	exon	20154211	20155168	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01358_ch_T0000543;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000543;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000543:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20155169	20164080	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01358_ch_T0000543;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000543;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01358_ch_T0000543:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20164081	20164270	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01358_ch_T0000543;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000543;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000543:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20164271	20164659	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01358_ch_T0000543;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000543;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01358_ch_T0000543:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20164660	20167011	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01358_ch_T0000543;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000543;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000543:2;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20154240	20168526	1000	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01358_ch_T0000544;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_G0000186;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG01358_ch_T0000544;Name=LOC105377224
HG01358_chrY	CAT	exon	20154240	20155168	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01358_ch_T0000544;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000544;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000544:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20155169	20164181	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01358_ch_T0000544;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000544;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01358_ch_T0000544:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20164182	20164270	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01358_ch_T0000544;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000544;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000544:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20164271	20164659	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01358_ch_T0000544;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000544;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01358_ch_T0000544:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20164660	20168526	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01358_ch_T0000544;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000544;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000544:2;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	20154293	20166904	1000	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01358_ch_T0000545;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_G0000186;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG01358_ch_T0000545;Name=LOC105377224
HG01358_chrY	CAT	exon	20154293	20155168	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01358_ch_T0000545;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000545;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000545:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20155169	20164181	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01358_ch_T0000545;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000545;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01358_ch_T0000545:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20164182	20164270	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01358_ch_T0000545;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000545;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000545:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20164271	20164659	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01358_ch_T0000545;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000545;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01358_ch_T0000545:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20164660	20164779	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01358_ch_T0000545;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000545;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000545:2;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20164780	20166097	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01358_ch_T0000545;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000545;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01358_ch_T0000545:2;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20166098	20166904	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01358_ch_T0000545;gene_id=HG01358_ch_G0000186;Parent=HG01358_ch_T0000545;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01358_ch_T0000545:3;Name=LOC105377224;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	20985021	21038581	.	-	.	source_gene_common_name=TTTY10;source_gene=hg002_chrY_paternal_441;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;gene_id=HG01358_ch_G0000187;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG01358_ch_G0000187;Name=TTTY10
HG01358_chrY	CAT	transcript	20985021	21038581	1000	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_G0000187;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=HG01358_ch_T0000546;Name=TTTY10
HG01358_chrY	CAT	exon	20985021	20985175	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01358_ch_T0000546:0;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20985176	20985780	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01358_ch_T0000546:0;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20985781	20986020	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01358_ch_T0000546:1;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20986021	20987541	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01358_ch_T0000546:1;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20987542	20987601	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01358_ch_T0000546:2;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20987602	20989224	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01358_ch_T0000546:2;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	20989225	20989334	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01358_ch_T0000546:3;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	20989335	21026704	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01358_ch_T0000546:3;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21026705	21026809	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01358_ch_T0000546:4;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21026810	21037623	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01358_ch_T0000546:4;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21037624	21038581	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01358_ch_T0000546;gene_id=HG01358_ch_G0000187;Parent=HG01358_ch_T0000546;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01358_ch_T0000546:5;Name=TTTY10;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	21095129	21112508	.	+	.	source_gene_common_name=EIF1AY;source_gene=hg002_chrY_paternal_443;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;gene_id=HG01358_ch_G0000188;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000188;Name=EIF1AY
HG01358_chrY	CAT	transcript	21095129	21112508	100	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_G0000188;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG01358_ch_T0000547;Name=EIF1AY
HG01358_chrY	CAT	exon	21095129	21095240	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000547:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21095225	21095240	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000547:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	21095225	21095227	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG01358_ch_T0000547;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21095241	21098960	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000547:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21098961	21099044	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000547:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21098961	21099044	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000547:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21099045	21101942	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000547:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21101943	21102046	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000547:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21101943	21102046	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000547:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21102047	21107377	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000547:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21107378	21107459	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000547:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21107378	21107459	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000547:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21107460	21108837	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000547:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21108838	21108929	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000547:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21108838	21108929	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000547:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21108930	21111694	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000547:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21111695	21112508	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000547:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21111695	21111700	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000547:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	21111698	21111700	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000547;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000547;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG01358_ch_T0000547;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	21095129	21112508	100	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_G0000188;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG01358_ch_T0000548;Name=EIF1AY
HG01358_chrY	CAT	exon	21095129	21095240	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000548:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21095225	21095240	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000548:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	21095225	21095227	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG01358_ch_T0000548;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21095241	21098960	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000548:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21098961	21099044	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000548:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21098961	21099044	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000548:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21099045	21101942	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000548:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21101943	21102046	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000548:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21101943	21102046	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000548:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21102047	21103827	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000548:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21103828	21103878	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000548:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21103828	21103878	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000548:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21103879	21107377	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000548:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21107378	21107459	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000548:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21107378	21107459	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000548:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21107460	21108837	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000548:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21108838	21108929	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000548:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21108838	21108929	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000548:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21108930	21111694	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01358_ch_T0000548:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21111695	21112508	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01358_ch_T0000548:6;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21111695	21111700	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01358_ch_T0000548:6;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	21111698	21111700	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000548;gene_id=HG01358_ch_G0000188;Parent=HG01358_ch_T0000548;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG01358_ch_T0000548;Name=EIF1AY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	21275463	21300387	.	+	.	source_gene_common_name=RPS4Y2;source_gene=hg002_chrY_paternal_446;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;gene_id=HG01358_ch_G0000189;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000189;Name=RPS4Y2
HG01358_chrY	CAT	transcript	21275463	21300387	100	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_G0000189;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=HG01358_ch_T0000549;Name=RPS4Y2
HG01358_chrY	CAT	exon	21275463	21275521	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01358_ch_T0000549:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21275519	21275521	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01358_ch_T0000549:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	21275519	21275521	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=start_codon:HG01358_ch_T0000549;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21275522	21276132	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01358_ch_T0000549:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21276133	21276210	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01358_ch_T0000549:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21276133	21276210	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01358_ch_T0000549:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21276211	21279222	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01358_ch_T0000549:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21279223	21279403	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01358_ch_T0000549:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21279223	21279403	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01358_ch_T0000549:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21279404	21280638	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01358_ch_T0000549:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21280639	21280736	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01358_ch_T0000549:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21280639	21280736	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01358_ch_T0000549:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21280737	21288159	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01358_ch_T0000549:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21288160	21288331	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01358_ch_T0000549:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21288160	21288331	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01358_ch_T0000549:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21288332	21298863	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01358_ch_T0000549:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21298864	21299021	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01358_ch_T0000549:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21298864	21299021	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01358_ch_T0000549:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21299022	21300285	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01358_ch_T0000549:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21300286	21300387	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01358_ch_T0000549:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	21300286	21300387	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01358_ch_T0000549:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	21300385	21300387	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000549;gene_id=HG01358_ch_G0000189;Parent=HG01358_ch_T0000549;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=stop_codon:HG01358_ch_T0000549;Name=RPS4Y2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	21657983	21692328	.	+	.	source_gene_common_name=LOC105377225;source_gene=hg002_chrY_paternal_451;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;gene_id=HG01358_ch_G0000190;gene_biotype=lncRNA;gene_name=LOC105377225;gene_sources=liftoff;ID=HG01358_ch_G0000190;Name=LOC105377225
HG01358_chrY	CAT	transcript	21657983	21689573	1000	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_G0000190;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01358_ch_T0000550;Name=LOC105377225
HG01358_chrY	CAT	exon	21657983	21658218	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000550:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21658219	21667525	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000550:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667526	21667576	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000550:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667577	21667768	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000550:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667769	21667863	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000550:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667864	21670942	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000550:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21670943	21670996	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000550:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21670997	21672192	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000550:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21672193	21672327	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000550:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21672328	21689309	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000550:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21689310	21689573	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01358_ch_T0000550;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000550;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000550:5;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	21657983	21689573	1000	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_G0000190;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01358_ch_T0000551;Name=LOC105377225
HG01358_chrY	CAT	exon	21657983	21658218	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000551:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21658219	21667768	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000551:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667769	21667863	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000551:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667864	21670942	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000551:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21670943	21670996	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000551:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21670997	21672192	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000551:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21672193	21672327	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000551:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21672328	21689309	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000551:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21689310	21689573	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01358_ch_T0000551;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000551;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000551:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	21657983	21689573	1000	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_G0000190;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01358_ch_T0000552;Name=LOC105377225
HG01358_chrY	CAT	exon	21657983	21658218	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000552:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21658219	21667891	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000552:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667892	21667945	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000552:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667946	21670942	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000552:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21670943	21670996	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000552:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21670997	21672192	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000552:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21672193	21672327	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000552:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21672328	21689309	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000552:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21689310	21689573	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01358_ch_T0000552;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000552;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000552:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	21657983	21692328	1000	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_G0000190;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01358_ch_T0000553;Name=LOC105377225
HG01358_chrY	CAT	exon	21657983	21658218	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000553:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21658219	21664129	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000553:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21664130	21664221	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000553:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21664222	21667525	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000553:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667526	21667576	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000553:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667577	21667768	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000553:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667769	21667863	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000553:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667864	21670942	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000553:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21670943	21670996	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000553:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21670997	21672192	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000553:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21672193	21672327	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000553:5;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21672328	21689309	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000553:5;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21689310	21692328	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01358_ch_T0000553;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000553;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000553:6;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	21663389	21689573	1000	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_G0000190;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01358_ch_T0000554;Name=LOC105377225
HG01358_chrY	CAT	exon	21663389	21667576	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000554:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667577	21667768	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000554:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667769	21667945	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000554:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667946	21670942	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000554:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21670943	21670996	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000554:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21670997	21672192	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000554:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21672193	21672327	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000554:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21672328	21689309	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000554:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21689310	21689573	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01358_ch_T0000554;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000554;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000554:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	21663389	21689573	1000	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_G0000190;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01358_ch_T0000555;Name=LOC105377225
HG01358_chrY	CAT	exon	21663389	21667576	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000555:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667577	21667891	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000555:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667892	21667945	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000555:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667946	21670942	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000555:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21670943	21670996	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000555:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21670997	21672192	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000555:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21672193	21672327	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000555:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21672328	21689309	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000555:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21689310	21689573	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01358_ch_T0000555;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000555;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000555:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	21663389	21689573	1000	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_G0000190;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01358_ch_T0000556;Name=LOC105377225
HG01358_chrY	CAT	exon	21663389	21667576	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000556:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667577	21667768	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000556:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21667769	21667945	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000556:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21667946	21670942	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000556:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21670943	21670996	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000556:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21670997	21672033	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000556:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21672034	21672125	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000556:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21672126	21689309	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01358_ch_T0000556:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21689310	21689573	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01358_ch_T0000556;gene_id=HG01358_ch_G0000190;Parent=HG01358_ch_T0000556;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01358_ch_T0000556:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	21747491	21772728	.	+	.	source_gene_common_name=LOC107987346;source_gene=hg002_chrY_paternal_453;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;gene_id=HG01358_ch_G0000191;gene_biotype=lncRNA;gene_name=LOC107987346;gene_sources=liftoff;ID=HG01358_ch_G0000191;Name=LOC107987346
HG01358_chrY	CAT	transcript	21747491	21772728	1000	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01358_ch_T0000557;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_G0000191;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG01358_ch_T0000557;Name=LOC107987346
HG01358_chrY	CAT	exon	21747491	21747528	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01358_ch_T0000557;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000557;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01358_ch_T0000557:0;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21747529	21747705	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01358_ch_T0000557;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000557;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01358_ch_T0000557:0;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21747706	21747813	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01358_ch_T0000557;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000557;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01358_ch_T0000557:1;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21747814	21769903	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01358_ch_T0000557;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000557;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01358_ch_T0000557:1;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21769904	21772728	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01358_ch_T0000557;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000557;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01358_ch_T0000557:2;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	21747491	21772728	1000	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01358_ch_T0000558;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_G0000191;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG01358_ch_T0000558;Name=LOC107987346
HG01358_chrY	CAT	exon	21747491	21747528	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01358_ch_T0000558;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000558;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01358_ch_T0000558:0;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21747529	21747705	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01358_ch_T0000558;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000558;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01358_ch_T0000558:0;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21747706	21747813	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01358_ch_T0000558;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000558;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01358_ch_T0000558:1;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21747814	21769903	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01358_ch_T0000558;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000558;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01358_ch_T0000558:1;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21769904	21770062	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01358_ch_T0000558;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000558;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01358_ch_T0000558:2;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21770063	21772476	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01358_ch_T0000558;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000558;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01358_ch_T0000558:2;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21772477	21772728	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01358_ch_T0000558;gene_id=HG01358_ch_G0000191;Parent=HG01358_ch_T0000558;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01358_ch_T0000558:3;Name=LOC107987346;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	21767419	21822360	.	-	.	source_gene_common_name=LOC107987347;source_gene=hg002_chrY_paternal_454;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;gene_id=HG01358_ch_G0000192;gene_biotype=lncRNA;gene_name=LOC107987347;gene_sources=liftoff;ID=HG01358_ch_G0000192;Name=LOC107987347
HG01358_chrY	CAT	transcript	21767419	21822360	1000	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01358_ch_T0000559;gene_id=HG01358_ch_G0000192;Parent=HG01358_ch_G0000192;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=HG01358_ch_T0000559;Name=LOC107987347
HG01358_chrY	CAT	exon	21767419	21768504	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01358_ch_T0000559;gene_id=HG01358_ch_G0000192;Parent=HG01358_ch_T0000559;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG01358_ch_T0000559:0;Name=LOC107987347;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21768505	21815504	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01358_ch_T0000559;gene_id=HG01358_ch_G0000192;Parent=HG01358_ch_T0000559;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG01358_ch_T0000559:0;Name=LOC107987347;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21815505	21815570	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01358_ch_T0000559;gene_id=HG01358_ch_G0000192;Parent=HG01358_ch_T0000559;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG01358_ch_T0000559:1;Name=LOC107987347;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21815571	21821910	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01358_ch_T0000559;gene_id=HG01358_ch_G0000192;Parent=HG01358_ch_T0000559;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG01358_ch_T0000559:1;Name=LOC107987347;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21821911	21822360	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01358_ch_T0000559;gene_id=HG01358_ch_G0000192;Parent=HG01358_ch_T0000559;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG01358_ch_T0000559:2;Name=LOC107987347;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	21901257	21971198	.	-	.	source_gene_common_name=PRORY;source_gene=hg002_chrY_paternal_456;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;gene_id=HG01358_ch_G0000193;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG01358_ch_G0000193;Name=PRORY
HG01358_chrY	CAT	transcript	21901257	21971198	1000	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_G0000193;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=HG01358_ch_T0000560;Name=PRORY
HG01358_chrY	CAT	exon	21901257	21902632	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01358_ch_T0000560:0;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21902633	21902783	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG01358_ch_T0000560:0;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21902784	21903148	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01358_ch_T0000560:1;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21903149	21903264	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG01358_ch_T0000560:1;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21903265	21903321	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01358_ch_T0000560:2;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21903322	21905583	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG01358_ch_T0000560:2;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21905584	21905708	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01358_ch_T0000560:3;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21905709	21970995	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG01358_ch_T0000560:3;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21970996	21971198	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01358_ch_T0000560;gene_id=HG01358_ch_G0000193;Parent=HG01358_ch_T0000560;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01358_ch_T0000560:4;Name=PRORY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	21914500	21920914	.	-	.	source_gene_common_name=RBMY2EP;source_gene=hg002_chrY_paternal_457;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;gene_id=HG01358_ch_G0000194;gene_biotype=transcribed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG01358_ch_G0000194;Name=RBMY2EP
HG01358_chrY	CAT	transcript	21914500	21920914	1000	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_G0000194;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=HG01358_ch_T0000561;Name=RBMY2EP
HG01358_chrY	CAT	exon	21914500	21914643	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01358_ch_T0000561:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21914644	21915051	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG01358_ch_T0000561:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21915052	21915140	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01358_ch_T0000561:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21915141	21915222	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG01358_ch_T0000561:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21915223	21915333	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01358_ch_T0000561:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21915334	21920274	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG01358_ch_T0000561:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21920275	21920378	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01358_ch_T0000561:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	21920379	21920828	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG01358_ch_T0000561:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	21920829	21920914	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01358_ch_T0000561;gene_id=HG01358_ch_G0000194;Parent=HG01358_ch_T0000561;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01358_ch_T0000561:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22030689	22045136	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=HG01358_ch_G0000195;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG01358_ch_G0000195;Name=RBMY1A1
HG01358_chrY	CAT	transcript	22030689	22044148	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_G0000195;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000562;Name=RBMY1A1
HG01358_chrY	CAT	exon	22030689	22030836	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22030837	22032697	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22032698	22032810	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22032702	22032810	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22032702	22032704	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000562;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22032811	22033284	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22033285	22033388	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22033285	22033388	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22033389	22036407	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22036408	22036585	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22036408	22036585	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22036586	22038500	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22038501	22038653	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22038501	22038653	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22038654	22040663	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22040664	22040778	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22040664	22040778	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22040779	22041733	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22041734	22041844	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22041734	22041844	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22041845	22042285	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22042286	22042396	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22042286	22042396	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22042397	22042830	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22042831	22042941	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22042831	22042941	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22042942	22043862	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22043863	22043973	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22043863	22043973	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22043974	22044059	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000562:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22044060	22044148	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000562:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22044060	22044147	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000562:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22044145	22044147	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000562;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000562;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22030689	22045136	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_G0000195;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000563;Name=RBMY1A1
HG01358_chrY	CAT	exon	22030689	22030836	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22030837	22032697	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22032698	22032810	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22032702	22032810	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22032702	22032704	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000563;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22032811	22033284	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22033285	22033388	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22033285	22033388	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22033389	22036407	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22036408	22036585	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22036408	22036585	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22036586	22038500	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22038501	22038653	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22038501	22038653	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22038654	22040663	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22040664	22040778	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22040664	22040778	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22040779	22041733	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22041734	22041844	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22041734	22041844	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22041845	22042285	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22042286	22042396	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22042286	22042396	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22042397	22042830	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22042831	22042941	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22042831	22042941	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22042942	22044059	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22044060	22044148	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22044060	22044148	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22044149	22044559	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000563:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22044560	22045136	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000563:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22044560	22044858	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000563:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22044856	22044858	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000563;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000563;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22030689	22045136	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_G0000195;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000564;Name=RBMY1A1
HG01358_chrY	CAT	exon	22030689	22030836	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22030837	22032697	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22032698	22032810	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22032811	22033284	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22033285	22033388	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22033389	22038500	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22038501	22038653	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22038530	22038653	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000564:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22038530	22038532	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000564;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22038654	22040663	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22040664	22040778	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22040664	22040778	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000564:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22040779	22041733	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22041734	22041844	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22041734	22041844	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000564:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22041845	22042285	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22042286	22042396	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22042286	22042396	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000564:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22042397	22042830	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22042831	22042941	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22042831	22042941	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000564:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22042942	22043862	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22043863	22043973	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22043863	22043973	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000564:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22043974	22044059	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22044060	22044148	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22044060	22044148	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000564:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22044149	22044559	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000564:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22044560	22045136	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000564:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22044560	22044858	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000564:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22044856	22044858	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000564;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000564;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22030689	22045136	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_G0000195;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000565;Name=RBMY1A1
HG01358_chrY	CAT	exon	22030689	22030836	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22030837	22032697	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22032698	22032810	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22032702	22032810	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22032702	22032704	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000565;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22032811	22033284	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22033285	22033388	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22033285	22033388	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22033389	22036407	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22036408	22036585	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22036408	22036585	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22036586	22038500	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22038501	22038653	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22038501	22038653	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22038654	22040663	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22040664	22040778	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22040664	22040778	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22040779	22041733	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22041734	22041844	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22041734	22041844	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22041845	22042285	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22042286	22042396	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22042286	22042396	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22042397	22042830	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22042831	22042941	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22042831	22042941	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22042942	22043862	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22043863	22043973	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22043863	22043973	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22043974	22044059	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22044060	22044148	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22044060	22044148	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22044149	22044559	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000565:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22044560	22045136	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000565:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22044560	22044858	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000565:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22044856	22044858	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000565;gene_id=HG01358_ch_G0000195;Parent=HG01358_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000565;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22054228	22068678	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=HG01358_ch_G0000196;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG01358_ch_G0000196;Name=RBMY1A1
HG01358_chrY	CAT	transcript	22054228	22068678	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_G0000196;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000566;Name=RBMY1A1
HG01358_chrY	CAT	exon	22054228	22054375	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22054376	22056236	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22056237	22056349	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22056241	22056349	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22056241	22056243	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000566;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22056350	22056825	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22056826	22056929	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22056826	22056929	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22056930	22059948	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22059949	22060126	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22059949	22060126	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22060127	22062041	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22062042	22062194	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22062042	22062194	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22062195	22064204	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22064205	22064319	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22064205	22064319	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22064320	22065274	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22065275	22065385	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22065275	22065385	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22065386	22065826	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22065827	22065937	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22065827	22065937	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22065938	22066371	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22066372	22066482	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22066372	22066482	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22066483	22067601	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22067602	22067690	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22067602	22067690	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22067691	22068101	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000566:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22068102	22068678	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000566:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22068102	22068400	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000566:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22068398	22068400	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000566;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000566;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000566;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22054228	22068678	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_G0000196;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000567;Name=RBMY1A1
HG01358_chrY	CAT	exon	22054228	22054375	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22054376	22056236	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22056237	22056349	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22056241	22056349	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22056241	22056243	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000567;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22056350	22056825	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22056826	22056929	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22056826	22056929	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22056930	22059948	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22059949	22060126	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22059949	22060126	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22060127	22062041	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22062042	22062194	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22062042	22062194	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22062195	22064204	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22064205	22064319	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22064205	22064319	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22064320	22065274	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22065275	22065385	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22065275	22065385	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22065386	22065826	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22065827	22065937	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22065827	22065937	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22065938	22066371	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22066372	22066482	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22066372	22066482	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22066483	22067403	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22067404	22067514	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22067404	22067514	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22067515	22067601	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22067602	22067690	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22067602	22067690	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22067691	22068101	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000567:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22068102	22068678	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000567:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22068102	22068400	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000567:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22068398	22068400	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000567;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000567;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22054228	22067690	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_G0000196;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000568;Name=RBMY1A1
HG01358_chrY	CAT	exon	22054228	22054375	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22054376	22056236	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22056237	22056349	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22056241	22056349	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22056241	22056243	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000568;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22056350	22056825	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22056826	22056929	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22056826	22056929	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22056930	22059948	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22059949	22060126	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22059949	22060126	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22060127	22062041	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22062042	22062194	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22062042	22062194	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22062195	22064204	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22064205	22064319	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22064205	22064319	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22064320	22065274	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22065275	22065385	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22065275	22065385	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22065386	22065826	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22065827	22065937	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22065827	22065937	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22065938	22066371	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22066372	22066482	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22066372	22066482	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22066483	22067403	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22067404	22067514	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22067404	22067514	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22067515	22067601	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000568:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22067602	22067690	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000568:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22067602	22067689	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000568:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22067687	22067689	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000568;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000568;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22054228	22068678	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_G0000196;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000569;Name=RBMY1A1
HG01358_chrY	CAT	exon	22054228	22054375	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22054376	22056236	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22056237	22056349	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22056350	22056825	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22056826	22056929	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22056930	22062041	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22062042	22062194	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22062071	22062194	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000569:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22062071	22062073	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000569;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22062195	22064204	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22064205	22064319	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22064205	22064319	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000569:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22064320	22065274	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22065275	22065385	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22065275	22065385	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000569:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22065386	22065826	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22065827	22065937	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22065827	22065937	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000569:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22065938	22066371	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22066372	22066482	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22066372	22066482	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000569:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22066483	22067403	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22067404	22067514	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22067404	22067514	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000569:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22067515	22067601	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22067602	22067690	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22067602	22067690	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000569:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22067691	22068101	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000569:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22068102	22068678	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000569:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22068102	22068400	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000569:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22068398	22068400	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000569;gene_id=HG01358_ch_G0000196;Parent=HG01358_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000569;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22077770	22092218	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=HG01358_ch_G0000197;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG01358_ch_G0000197;Name=RBMY1A1
HG01358_chrY	CAT	transcript	22077770	22092218	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_G0000197;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000570;Name=RBMY1A1
HG01358_chrY	CAT	exon	22077770	22077917	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22077918	22079778	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22079779	22079891	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22079783	22079891	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22079783	22079785	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000570;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22079892	22080365	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22080366	22080469	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22080366	22080469	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22080470	22083488	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22083489	22083666	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22083489	22083666	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22083667	22085581	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22085582	22085734	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22085582	22085734	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22085735	22087744	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22087745	22087859	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22087745	22087859	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22087860	22088814	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22088815	22088925	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22088815	22088925	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22088926	22089366	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22089367	22089477	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22089367	22089477	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22089478	22089911	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22089912	22090022	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22089912	22090022	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22090023	22091141	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22091142	22091230	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22091142	22091230	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22091231	22091641	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000570:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22091642	22092218	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000570:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22091642	22091940	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000570:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22091938	22091940	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000570;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000570;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22077770	22092218	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_G0000197;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000571;Name=RBMY1A1
HG01358_chrY	CAT	exon	22077770	22077917	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22077918	22079778	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22079779	22079891	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22079892	22080365	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22080366	22080469	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22080470	22085581	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22085582	22085734	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22085611	22085734	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000571:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22085611	22085613	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000571;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22085735	22087744	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22087745	22087859	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22087745	22087859	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000571:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22087860	22088814	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22088815	22088925	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22088815	22088925	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000571:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22088926	22089366	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22089367	22089477	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22089367	22089477	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000571:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22089478	22089911	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22089912	22090022	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22089912	22090022	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000571:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22090023	22090943	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22090944	22091054	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22090944	22091054	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000571:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22091055	22091141	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22091142	22091230	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22091142	22091230	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000571:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22091231	22091641	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000571:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22091642	22092218	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000571:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22091642	22091940	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000571:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22091938	22091940	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000571;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000571;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000571;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22077770	22092218	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_G0000197;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000572;Name=RBMY1A1
HG01358_chrY	CAT	exon	22077770	22077917	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22077918	22079778	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22079779	22079891	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22079783	22079891	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22079783	22079785	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000572;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22079892	22080365	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22080366	22080469	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22080366	22080469	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22080470	22083488	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22083489	22083666	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22083489	22083666	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22083667	22085581	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22085582	22085734	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22085582	22085734	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22085735	22087744	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22087745	22087859	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22087745	22087859	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22087860	22088814	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22088815	22088925	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22088815	22088925	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22088926	22089366	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22089367	22089477	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22089367	22089477	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22089478	22089911	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22089912	22090022	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22089912	22090022	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22090023	22090943	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22090944	22091054	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22090944	22091054	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22091055	22091141	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22091142	22091230	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22091142	22091230	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22091231	22091641	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000572:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22091642	22092218	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000572:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22091642	22091940	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000572:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22091938	22091940	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000572;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000572;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000572;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22077770	22091230	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_G0000197;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000573;Name=RBMY1A1
HG01358_chrY	CAT	exon	22077770	22077917	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22077918	22079778	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22079779	22079891	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22079783	22079891	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22079783	22079785	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000573;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22079892	22080365	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22080366	22080469	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22080366	22080469	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22080470	22083488	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22083489	22083666	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22083489	22083666	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22083667	22085581	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22085582	22085734	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22085582	22085734	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22085735	22087744	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22087745	22087859	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22087745	22087859	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22087860	22088814	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22088815	22088925	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22088815	22088925	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22088926	22089366	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22089367	22089477	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22089367	22089477	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22089478	22089911	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22089912	22090022	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22089912	22090022	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22090023	22090943	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22090944	22091054	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22090944	22091054	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22091055	22091141	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000573:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22091142	22091230	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000573:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22091142	22091229	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000573:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22091227	22091229	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG01358_ch_T0000573;gene_id=HG01358_ch_G0000197;Parent=HG01358_ch_T0000573;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000573;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22101310	22115758	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_462.1;gene_id=HG01358_ch_G0000198;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG01358_ch_G0000198;Name=RBMY1A1
HG01358_chrY	CAT	transcript	22101310	22114770	1000	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_G0000198;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000574;Name=RBMY1A1
HG01358_chrY	CAT	exon	22101310	22101457	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22101458	22103318	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22103319	22103431	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22103323	22103431	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22103323	22103325	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000574;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22103432	22103905	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22103906	22104009	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22103906	22104009	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22104010	22107028	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22107029	22107206	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22107029	22107206	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22107207	22109121	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22109122	22109274	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22109122	22109274	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22109275	22111284	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22111285	22111399	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22111285	22111399	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22111400	22112354	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22112355	22112465	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22112355	22112465	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22112466	22112906	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22112907	22113017	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22112907	22113017	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22113018	22113451	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22113452	22113562	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22113452	22113562	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22113563	22114483	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22114484	22114594	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22114484	22114594	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22114595	22114681	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000574:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22114682	22114770	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000574:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22114682	22114769	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000574:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22114767	22114769	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG01358_ch_T0000574;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000574;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000574;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22101310	22115758	1000	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_G0000198;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000575;Name=RBMY1A1
HG01358_chrY	CAT	exon	22101310	22101457	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22101458	22103318	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22103319	22103431	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22103323	22103431	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22103323	22103325	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000575;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22103432	22103905	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22103906	22104009	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22103906	22104009	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22104010	22107028	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22107029	22107206	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22107029	22107206	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22107207	22109121	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22109122	22109274	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22109122	22109274	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22109275	22111284	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22111285	22111399	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22111285	22111399	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22111400	22112354	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22112355	22112465	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22112355	22112465	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22112466	22112906	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22112907	22113017	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22112907	22113017	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22113018	22113451	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22113452	22113562	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22113452	22113562	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22113563	22114681	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22114682	22114770	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22114682	22114770	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22114771	22115181	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000575:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22115182	22115758	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000575:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22115182	22115480	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000575:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22115478	22115480	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG01358_ch_T0000575;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000575;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000575;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22101310	22115758	1000	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_G0000198;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000576;Name=RBMY1A1
HG01358_chrY	CAT	exon	22101310	22101457	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22101458	22103318	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22103319	22103431	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22103432	22103905	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22103906	22104009	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22104010	22109121	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22109122	22109274	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22109151	22109274	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000576:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22109151	22109153	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000576;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22109275	22111284	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22111285	22111399	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22111285	22111399	.	+	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000576:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22111400	22112354	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22112355	22112465	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22112355	22112465	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000576:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22112466	22112906	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22112907	22113017	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22112907	22113017	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000576:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22113018	22113451	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22113452	22113562	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22113452	22113562	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000576:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22113563	22114483	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22114484	22114594	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22114484	22114594	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000576:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22114595	22114681	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22114682	22114770	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22114682	22114770	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000576:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22114771	22115181	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000576:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22115182	22115758	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000576:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22115182	22115480	.	+	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000576:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22115478	22115480	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG01358_ch_T0000576;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000576;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000576;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22101310	22115758	1000	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_G0000198;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000577;Name=RBMY1A1
HG01358_chrY	CAT	exon	22101310	22101457	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22101458	22103318	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22103319	22103431	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22103323	22103431	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22103323	22103325	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000577;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22103432	22103905	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22103906	22104009	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22103906	22104009	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22104010	22107028	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22107029	22107206	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22107029	22107206	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22107207	22109121	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22109122	22109274	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22109122	22109274	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22109275	22111284	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22111285	22111399	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22111285	22111399	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22111400	22112354	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22112355	22112465	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22112355	22112465	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22112466	22112906	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22112907	22113017	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22112907	22113017	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22113018	22113451	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22113452	22113562	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22113452	22113562	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22113563	22114483	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22114484	22114594	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22114484	22114594	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22114595	22114681	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22114682	22114770	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22114682	22114770	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22114771	22115181	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000577:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22115182	22115758	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000577:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22115182	22115480	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000577:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22115478	22115480	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG01358_ch_T0000577;gene_id=HG01358_ch_G0000198;Parent=HG01358_ch_T0000577;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000577;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22118630	22150943	.	+	.	source_gene_common_name=RBMY1D;source_gene=hg002_chrY_paternal_463;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;gene_id=HG01358_ch_G0000199;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000199;Name=RBMY1D
HG01358_chrY	CAT	transcript	22118630	22139298	100	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_G0000199;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01358_ch_T0000578;Name=RBMY1D
HG01358_chrY	CAT	exon	22118630	22118650	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22118651	22126858	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22126859	22126971	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22126863	22126971	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22126863	22126865	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01358_ch_T0000578;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22126972	22127445	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22127446	22127549	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22127446	22127549	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22127550	22130568	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22130569	22130746	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22130569	22130746	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22130747	22132661	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22132662	22132814	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22132662	22132814	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22132815	22134824	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22134825	22134939	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22134825	22134939	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22134940	22135894	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22135895	22136005	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22135895	22136005	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136006	22136446	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136447	22136557	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136447	22136557	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136558	22136991	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136992	22137102	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136992	22137102	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22137103	22138023	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138024	22138134	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138024	22138134	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138135	22138221	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138222	22138310	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138222	22138310	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138311	22138721	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000578:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138722	22139298	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000578:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138722	22139020	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000578:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22139018	22139020	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000578;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000578;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01358_ch_T0000578;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22124850	22139298	100	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_G0000199;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01358_ch_T0000579;Name=RBMY1D
HG01358_chrY	CAT	exon	22124850	22124997	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22124998	22126858	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22126859	22126971	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22126863	22126971	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22126863	22126865	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01358_ch_T0000579;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22126972	22127445	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22127446	22127549	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22127446	22127549	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22127550	22130568	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22130569	22130746	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22130569	22130746	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22130747	22132661	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22132662	22132814	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22132662	22132814	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22132815	22134824	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22134825	22134939	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22134825	22134939	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22134940	22135894	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22135895	22136005	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22135895	22136005	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136006	22136446	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136447	22136557	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136447	22136557	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136558	22136991	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136992	22137102	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136992	22137102	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22137103	22138023	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138024	22138134	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138024	22138134	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138135	22138221	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138222	22138310	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138222	22138310	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138311	22138721	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000579:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138722	22139298	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000579:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138722	22139020	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000579:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22139018	22139020	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000579;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000579;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01358_ch_T0000579;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22124850	22139298	100	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_G0000199;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01358_ch_T0000580;Name=RBMY1D
HG01358_chrY	CAT	exon	22124850	22124997	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22124998	22126858	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22126859	22126971	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22126863	22126971	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22126863	22126865	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01358_ch_T0000580;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22126972	22127445	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22127446	22127549	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22127446	22127549	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22127550	22130568	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22130569	22130746	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22130569	22130746	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22130747	22132661	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22132662	22132814	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22132662	22132814	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22132815	22134824	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22134825	22134939	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22134825	22134939	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22134940	22135894	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22135895	22136005	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22135895	22136005	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136006	22136446	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136447	22136557	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136447	22136557	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136558	22136991	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136992	22137102	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136992	22137102	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22137103	22138221	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138222	22138310	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138222	22138310	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138311	22138721	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000580:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138722	22139298	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000580:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138722	22139020	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000580:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22139018	22139020	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000580;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000580;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01358_ch_T0000580;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22124850	22139298	100	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_G0000199;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01358_ch_T0000581;Name=RBMY1D
HG01358_chrY	CAT	exon	22124850	22124997	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22124998	22125670	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22125671	22125735	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22125736	22126858	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22126859	22126971	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22126921	22126971	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22126921	22126923	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01358_ch_T0000581;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22126972	22127459	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22127460	22127549	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22127460	22127549	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22127550	22130568	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22130569	22130746	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22130569	22130746	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22130747	22132661	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22132662	22132814	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22132662	22132814	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22132815	22134824	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22134825	22134939	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22134825	22134939	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22134940	22135894	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22135895	22136005	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22135895	22136005	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136006	22136446	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136447	22136557	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136447	22136557	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136558	22136991	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136992	22137102	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136992	22137102	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22137103	22138221	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138222	22138310	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138222	22138310	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138311	22138721	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000581:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138722	22139298	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000581:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138722	22139020	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000581:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22139018	22139020	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000581;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000581;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01358_ch_T0000581;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22124850	22139298	100	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_G0000199;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01358_ch_T0000582;Name=RBMY1D
HG01358_chrY	CAT	exon	22124850	22124997	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22124998	22126858	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000582:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22126859	22126971	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22126863	22126971	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000582:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22126863	22126865	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01358_ch_T0000582;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22126972	22127445	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000582:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22127446	22127549	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22127446	22127549	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000582:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22127550	22130568	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000582:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22130569	22130746	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22130569	22130746	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000582:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22130747	22132661	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000582:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22132662	22132814	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22132662	22132814	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000582:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22132815	22134824	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000582:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22134825	22134939	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22134825	22134939	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000582:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22134940	22135894	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000582:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22135895	22136005	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22135895	22136005	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000582:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136006	22138221	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000582:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138222	22138310	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138222	22138310	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000582:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138311	22138721	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000582:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138722	22139298	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000582:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138722	22139020	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000582:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22139018	22139020	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000582;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000582;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01358_ch_T0000582;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22124850	22140716	100	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_G0000199;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01358_ch_T0000583;Name=RBMY1D
HG01358_chrY	CAT	exon	22124850	22124997	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22124998	22126858	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22126859	22126971	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22126863	22126971	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22126863	22126865	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01358_ch_T0000583;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22126972	22127445	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22127446	22127549	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22127446	22127549	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22127550	22130568	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22130569	22130746	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22130569	22130746	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22130747	22132661	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22132662	22132814	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22132662	22132814	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22132815	22134824	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22134825	22134939	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22134825	22134939	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22134940	22135894	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22135895	22136005	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22135895	22136005	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136006	22136446	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136447	22136557	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136447	22136557	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136558	22136991	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136992	22137102	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136992	22137102	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22137103	22138023	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138024	22138134	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138024	22138134	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138135	22138221	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138222	22138310	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138222	22138310	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138311	22139557	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000583:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22139558	22140716	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000583:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22139558	22139565	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000583:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22139563	22139565	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000583;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000583;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01358_ch_T0000583;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22124850	22150943	100	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_G0000199;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01358_ch_T0000584;Name=RBMY1D
HG01358_chrY	CAT	exon	22124850	22124997	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22124998	22126858	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22126859	22126971	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22126863	22126971	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22126863	22126865	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01358_ch_T0000584;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22126972	22127445	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22127446	22127549	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22127446	22127549	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22127550	22130568	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22130569	22130746	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22130569	22130746	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22130747	22132661	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22132662	22132814	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22132662	22132814	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22132815	22134824	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22134825	22134939	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22134825	22134939	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22134940	22135894	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22135895	22136005	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22135895	22136005	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136006	22136446	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136447	22136557	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136447	22136557	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136558	22136991	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136992	22137102	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136992	22137102	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22137103	22138023	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138024	22138134	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138024	22138134	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138135	22138221	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138222	22138310	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138222	22138310	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138311	22149559	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000584:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22149560	22150943	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000584:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22149560	22149636	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000584:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22149634	22149636	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000584;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000584;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01358_ch_T0000584;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22127460	22139298	100	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_G0000199;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01358_ch_T0000585;Name=RBMY1D
HG01358_chrY	CAT	exon	22127460	22127549	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22127550	22132661	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000585:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22132662	22132814	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22132691	22132814	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000585:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22132691	22132693	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01358_ch_T0000585;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22132815	22134824	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000585:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22134825	22134939	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22134825	22134939	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000585:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22134940	22135894	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000585:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22135895	22136005	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22135895	22136005	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000585:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136006	22136446	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000585:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136447	22136557	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136447	22136557	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000585:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22136558	22136991	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000585:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22136992	22137102	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22136992	22137102	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000585:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22137103	22138023	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000585:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138024	22138134	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138024	22138134	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000585:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138135	22138221	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000585:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138222	22138310	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138222	22138310	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000585:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22138311	22138721	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01358_ch_T0000585:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22138722	22139298	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01358_ch_T0000585:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22138722	22139020	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01358_ch_T0000585:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22139018	22139020	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000585;gene_id=HG01358_ch_G0000199;Parent=HG01358_ch_T0000585;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01358_ch_T0000585;Name=RBMY1D;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22159007	22161260	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_465;alternative_source_transcripts=hg002_chrY_paternal_465.1;gene_id=HG01358_ch_G0000200;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG01358_ch_G0000200;Name=LOC105379266
HG01358_chrY	CAT	transcript	22159007	22161260	1000	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000586;gene_id=HG01358_ch_G0000200;Parent=HG01358_ch_G0000200;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=HG01358_ch_T0000586;Name=LOC105379266
HG01358_chrY	CAT	exon	22159007	22160287	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000586;gene_id=HG01358_ch_G0000200;Parent=HG01358_ch_T0000586;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG01358_ch_T0000586:0;Name=LOC105379266;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22160288	22160965	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000586;gene_id=HG01358_ch_G0000200;Parent=HG01358_ch_T0000586;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=intron:HG01358_ch_T0000586:0;Name=LOC105379266;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22160966	22161260	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG01358_ch_T0000586;gene_id=HG01358_ch_G0000200;Parent=HG01358_ch_T0000586;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG01358_ch_T0000586:1;Name=LOC105379266;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22173568	22184634	.	-	.	source_gene_common_name=TTTY13;source_gene=hg002_chrY_paternal_466;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;gene_id=HG01358_ch_G0000201;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG01358_ch_G0000201;Name=TTTY13
HG01358_chrY	CAT	transcript	22173568	22184634	1000	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_G0000201;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=HG01358_ch_T0000587;Name=TTTY13
HG01358_chrY	CAT	exon	22173568	22173630	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01358_ch_T0000587:0;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22173631	22174750	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01358_ch_T0000587:0;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22174751	22174842	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01358_ch_T0000587:1;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22174843	22177468	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01358_ch_T0000587:1;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22177469	22177630	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01358_ch_T0000587:2;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22177631	22179239	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01358_ch_T0000587:2;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22179240	22179338	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01358_ch_T0000587:3;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22179339	22179933	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01358_ch_T0000587:3;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22179934	22180095	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01358_ch_T0000587:4;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22180096	22184553	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01358_ch_T0000587:4;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22184554	22184634	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01358_ch_T0000587;gene_id=HG01358_ch_G0000201;Parent=HG01358_ch_T0000587;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01358_ch_T0000587:5;Name=TTTY13;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22359436	22374090	.	-	.	source_gene_common_name=LOC105377236;source_gene=hg002_chrY_paternal_472;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;gene_id=HG01358_ch_G0000202;gene_biotype=lncRNA;gene_name=LOC105377236;gene_sources=liftoff;ID=HG01358_ch_G0000202;Name=LOC105377236
HG01358_chrY	CAT	transcript	22359436	22372860	1000	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01358_ch_T0000588;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_G0000202;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG01358_ch_T0000588;Name=LOC105377236
HG01358_chrY	CAT	exon	22359436	22360979	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01358_ch_T0000588;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000588;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000588:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22360980	22368358	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01358_ch_T0000588;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000588;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000588:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22368359	22368494	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01358_ch_T0000588;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000588;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000588:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22368495	22371489	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01358_ch_T0000588;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000588;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000588:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22371490	22371651	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01358_ch_T0000588;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000588;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000588:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22371652	22371895	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01358_ch_T0000588;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000588;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000588:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22371896	22372860	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01358_ch_T0000588;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000588;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000588:3;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22359436	22372860	1000	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01358_ch_T0000589;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_G0000202;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG01358_ch_T0000589;Name=LOC105377236
HG01358_chrY	CAT	exon	22359436	22360979	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01358_ch_T0000589;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000589;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000589:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22360980	22368358	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01358_ch_T0000589;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000589;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000589:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22368359	22368494	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01358_ch_T0000589;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000589;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000589:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22368495	22371489	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01358_ch_T0000589;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000589;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000589:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22371490	22371564	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01358_ch_T0000589;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000589;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000589:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22371565	22371895	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01358_ch_T0000589;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000589;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000589:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22371896	22372860	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01358_ch_T0000589;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000589;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000589:3;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22359436	22374090	1000	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_G0000202;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG01358_ch_T0000590;Name=LOC105377236
HG01358_chrY	CAT	exon	22359436	22360979	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000590:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22360980	22368358	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000590:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22368359	22368494	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000590:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22368495	22371489	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000590:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22371490	22371651	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000590:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22371652	22371895	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000590:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22371896	22372681	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000590:3;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22372682	22373934	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01358_ch_T0000590:3;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22373935	22374090	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01358_ch_T0000590;gene_id=HG01358_ch_G0000202;Parent=HG01358_ch_T0000590;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01358_ch_T0000590:4;Name=LOC105377236;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22386553	22389441	.	+	.	source_gene_common_name=LOC105377237;source_gene=hg002_chrY_paternal_474;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;gene_id=HG01358_ch_G0000203;gene_biotype=lncRNA;gene_name=LOC105377237;gene_sources=liftoff;ID=HG01358_ch_G0000203;Name=LOC105377237
HG01358_chrY	CAT	transcript	22386553	22389441	1000	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01358_ch_T0000591;gene_id=HG01358_ch_G0000203;Parent=HG01358_ch_G0000203;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=HG01358_ch_T0000591;Name=LOC105377237
HG01358_chrY	CAT	exon	22386553	22387790	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01358_ch_T0000591;gene_id=HG01358_ch_G0000203;Parent=HG01358_ch_T0000591;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG01358_ch_T0000591:0;Name=LOC105377237;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22387791	22388962	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01358_ch_T0000591;gene_id=HG01358_ch_G0000203;Parent=HG01358_ch_T0000591;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG01358_ch_T0000591:0;Name=LOC105377237;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22388963	22389122	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01358_ch_T0000591;gene_id=HG01358_ch_G0000203;Parent=HG01358_ch_T0000591;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG01358_ch_T0000591:1;Name=LOC105377237;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22389123	22389282	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01358_ch_T0000591;gene_id=HG01358_ch_G0000203;Parent=HG01358_ch_T0000591;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG01358_ch_T0000591:1;Name=LOC105377237;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22389283	22389441	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01358_ch_T0000591;gene_id=HG01358_ch_G0000203;Parent=HG01358_ch_T0000591;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG01358_ch_T0000591:2;Name=LOC105377237;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22430372	22444821	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_475.1;gene_id=HG01358_ch_G0000204;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=augTM,transMap;ID=HG01358_ch_G0000204;Name=RBMY1A1
HG01358_chrY	CAT	transcript	22430372	22444821	1000	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_G0000204;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000592;Name=RBMY1A1
HG01358_chrY	CAT	exon	22430372	22430948	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22430650	22430948	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22430650	22430652	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000592;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22430949	22431359	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22431360	22431448	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22431360	22431448	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22431449	22432566	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22432567	22432677	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22432567	22432677	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22432678	22433111	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22433112	22433222	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22433112	22433222	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22433223	22433663	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22433664	22433774	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22433664	22433774	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22433775	22434729	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22434730	22434844	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22434730	22434844	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22434845	22436854	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22436855	22437007	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22436855	22437007	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22437008	22438922	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22438923	22439100	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22438923	22439100	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22439101	22442119	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22442120	22442223	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22442120	22442223	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22442224	22442699	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22442700	22442812	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22442700	22442808	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000592:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22442806	22442808	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000592;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22442813	22444673	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000592:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22444674	22444821	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000592;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000592;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000592:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22430372	22444821	1000	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_G0000204;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000593;Name=RBMY1A1
HG01358_chrY	CAT	exon	22430372	22430948	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22430650	22430948	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000593:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22430650	22430652	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000593;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22430949	22431359	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22431360	22431448	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22431360	22431448	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000593:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22431449	22431534	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22431535	22431645	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22431535	22431645	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000593:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22431646	22432566	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22432567	22432677	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22432567	22432677	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000593:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22432678	22433111	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22433112	22433222	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22433112	22433222	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000593:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22433223	22433663	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22433664	22433774	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22433664	22433774	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000593:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22433775	22434729	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22434730	22434844	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22434730	22434844	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000593:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22434845	22436854	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22436855	22437007	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22436855	22436978	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000593:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22436976	22436978	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000593;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22437008	22442119	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22442120	22442223	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22442224	22442699	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22442700	22442812	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22442813	22444673	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000593:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22444674	22444821	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000593;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000593;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000593:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22430372	22444821	1000	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_G0000204;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000594;Name=RBMY1A1
HG01358_chrY	CAT	exon	22430372	22430948	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22430650	22430948	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22430650	22430652	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01358_ch_T0000594;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22430949	22431359	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22431360	22431448	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22431360	22431448	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22431449	22431534	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22431535	22431645	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22431535	22431645	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22431646	22432566	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22432567	22432677	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22432567	22432677	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22432678	22433111	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22433112	22433222	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22433112	22433222	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22433223	22433663	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22433664	22433774	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22433664	22433774	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22433775	22434729	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22434730	22434844	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22434730	22434844	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22434845	22436854	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22436855	22437007	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22436855	22437007	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22437008	22438922	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22438923	22439100	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22438923	22439100	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22439101	22442119	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22442120	22442223	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22442120	22442223	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22442224	22442699	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22442700	22442812	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22442700	22442808	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000594:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22442806	22442808	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000594;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22442813	22444673	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000594:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22444674	22444821	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000594;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000594;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000594:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22431360	22444821	1000	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_G0000204;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01358_ch_T0000595;Name=RBMY1A1
HG01358_chrY	CAT	exon	22431360	22431448	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22431361	22431448	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22431449	22431534	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22431535	22431645	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22431535	22431645	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22431646	22432566	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22432567	22432677	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22432567	22432677	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22432678	22433111	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22433112	22433222	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22433112	22433222	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22433223	22433663	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22433664	22433774	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22433664	22433774	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22433775	22434729	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22434730	22434844	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22434730	22434844	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22434845	22436854	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22436855	22437007	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22436855	22437007	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22437008	22438922	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22438923	22439100	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22438923	22439100	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22439101	22442119	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22442120	22442223	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22442120	22442223	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22442224	22442699	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22442700	22442812	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22442700	22442808	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01358_ch_T0000595:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22442806	22442808	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01358_ch_T0000595;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22442813	22444673	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01358_ch_T0000595:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22444674	22444821	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000595;gene_id=HG01358_ch_G0000204;Parent=HG01358_ch_T0000595;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01358_ch_T0000595:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22452472	22468327	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;gene_id=HG01358_ch_G0000205;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000205;Name=RBMY1E
HG01358_chrY	CAT	transcript	22452472	22468327	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_G0000205;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01358_ch_T0000596;Name=RBMY1E
HG01358_chrY	CAT	exon	22452472	22453653	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22453646	22453653	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22453646	22453648	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01358_ch_T0000596;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22453654	22454900	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22454901	22454989	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454901	22454989	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454990	22455075	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22455076	22455186	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22455076	22455186	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22455187	22456107	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22456108	22456218	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22456108	22456218	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22456219	22456652	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22456653	22456763	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22456653	22456763	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22456764	22457204	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22457205	22457315	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22457205	22457315	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22457316	22458270	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22458271	22458385	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22458271	22458385	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22458386	22460395	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22460396	22460548	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22460396	22460548	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22460549	22462463	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22462464	22462641	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22462464	22462641	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22462642	22465660	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22465661	22465764	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22465661	22465764	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22465765	22466240	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22466241	22466353	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22466241	22466349	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000596:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22466347	22466349	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01358_ch_T0000596;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22466354	22468214	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000596:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22468215	22468327	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000596;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000596;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000596:11;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22453917	22465751	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_G0000205;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01358_ch_T0000597;Name=RBMY1E
HG01358_chrY	CAT	exon	22453917	22454489	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454191	22454489	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000597:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22454191	22454193	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01358_ch_T0000597;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454490	22454900	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000597:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22454901	22454989	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454901	22454989	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000597:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454990	22455075	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000597:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22455076	22455186	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22455076	22455186	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000597:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22455187	22456107	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000597:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22456108	22456218	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22456108	22456218	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000597:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22456219	22456652	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000597:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22456653	22456763	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22456653	22456763	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000597:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22456764	22457204	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000597:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22457205	22457315	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22457205	22457315	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000597:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22457316	22458270	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000597:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22458271	22458385	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22458271	22458385	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000597:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22458386	22460395	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000597:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22460396	22460548	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22460396	22460519	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000597:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22460517	22460519	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01358_ch_T0000597;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22460549	22465660	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000597:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22465661	22465751	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000597;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000597;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000597:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22453917	22468327	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_G0000205;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01358_ch_T0000598;Name=RBMY1E
HG01358_chrY	CAT	exon	22453917	22454489	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454191	22454489	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22454191	22454193	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01358_ch_T0000598;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454490	22454900	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22454901	22454989	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454901	22454989	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454990	22455075	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22455076	22455186	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22455076	22455186	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22455187	22456107	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22456108	22456218	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22456108	22456218	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22456219	22456652	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22456653	22456763	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22456653	22456763	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22456764	22457204	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22457205	22457315	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22457205	22457315	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22457316	22458270	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22458271	22458385	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22458271	22458385	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22458386	22460395	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22460396	22460548	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22460396	22460548	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22460549	22462463	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22462464	22462641	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22462464	22462641	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22462642	22465660	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22465661	22465764	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22465661	22465764	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22465765	22466240	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22466241	22466353	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22466241	22466349	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000598:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22466347	22466349	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01358_ch_T0000598;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22466354	22468214	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000598:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22468215	22468327	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000598;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000598;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000598:11;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22453917	22468327	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_G0000205;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01358_ch_T0000599;Name=RBMY1E
HG01358_chrY	CAT	exon	22453917	22454489	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454191	22454489	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22454191	22454193	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01358_ch_T0000599;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454490	22454900	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22454901	22454989	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454901	22454989	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454990	22456107	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22456108	22456218	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22456108	22456218	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22456219	22456652	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22456653	22456763	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22456653	22456763	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22456764	22457204	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22457205	22457315	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22457205	22457315	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22457316	22458270	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22458271	22458385	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22458271	22458385	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22458386	22460395	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22460396	22460548	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22460396	22460548	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22460549	22462463	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22462464	22462641	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22462464	22462641	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22462642	22465660	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22465661	22465764	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22465661	22465764	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22465765	22466240	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22466241	22466353	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22466241	22466349	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000599:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22466347	22466349	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01358_ch_T0000599;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22466354	22468214	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000599:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22468215	22468327	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000599;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000599;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000599:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22453917	22468327	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_G0000205;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01358_ch_T0000600;Name=RBMY1E
HG01358_chrY	CAT	exon	22453917	22454489	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454191	22454489	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000600:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22454191	22454193	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01358_ch_T0000600;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454490	22454900	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000600:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22454901	22454989	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22454901	22454989	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000600:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22454990	22457204	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000600:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22457205	22457315	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22457205	22457315	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000600:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22457316	22458270	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000600:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22458271	22458385	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22458271	22458385	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000600:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22458386	22460395	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000600:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22460396	22460548	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22460396	22460548	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000600:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22460549	22462463	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000600:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22462464	22462641	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22462464	22462641	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000600:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22462642	22465660	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000600:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22465661	22465764	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22465661	22465764	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000600:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22465765	22466240	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000600:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22466241	22466353	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22466241	22466349	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01358_ch_T0000600:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22466347	22466349	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01358_ch_T0000600;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22466354	22468214	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01358_ch_T0000600:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22468215	22468327	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000600;gene_id=HG01358_ch_G0000205;Parent=HG01358_ch_T0000600;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01358_ch_T0000600:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22578645	22580642	.	+	.	source_gene_common_name=LOC107987357;source_gene=hg002_chrY_paternal_510;gene_id=HG01358_ch_G0000206;gene_biotype=lncRNA;gene_name=LOC107987357;gene_sources=liftoff;ID=HG01358_ch_G0000206;Name=LOC107987357
HG01358_chrY	CAT	transcript	22578645	22580642	1000	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG01358_ch_T0000601;gene_id=HG01358_ch_G0000206;Parent=HG01358_ch_G0000206;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=HG01358_ch_T0000601;Name=LOC107987357
HG01358_chrY	CAT	exon	22578645	22578727	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG01358_ch_T0000601;gene_id=HG01358_ch_G0000206;Parent=HG01358_ch_T0000601;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG01358_ch_T0000601:0;Name=LOC107987357;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22578728	22578844	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG01358_ch_T0000601;gene_id=HG01358_ch_G0000206;Parent=HG01358_ch_T0000601;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG01358_ch_T0000601:0;Name=LOC107987357;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22578845	22578905	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG01358_ch_T0000601;gene_id=HG01358_ch_G0000206;Parent=HG01358_ch_T0000601;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG01358_ch_T0000601:1;Name=LOC107987357;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22578906	22580440	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG01358_ch_T0000601;gene_id=HG01358_ch_G0000206;Parent=HG01358_ch_T0000601;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG01358_ch_T0000601:1;Name=LOC107987357;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22580441	22580642	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG01358_ch_T0000601;gene_id=HG01358_ch_G0000206;Parent=HG01358_ch_T0000601;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG01358_ch_T0000601:2;Name=LOC107987357;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22622051	22646303	.	-	.	source_gene_common_name=PRY;source_gene=hg002_chrY_paternal_486;alternative_source_transcripts=hg002_chrY_paternal_486.1;gene_id=HG01358_ch_G0000207;gene_biotype=protein_coding;gene_name=PRY;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000207;Name=PRY
HG01358_chrY	CAT	transcript	22622051	22646303	100	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_G0000207;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=HG01358_ch_T0000602;Name=PRY
HG01358_chrY	CAT	exon	22622051	22622876	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01358_ch_T0000602:0;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22622618	22622876	.	-	1	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG01358_ch_T0000602:0;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22622618	22622620	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=stop_codon:HG01358_ch_T0000602;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22622877	22632374	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG01358_ch_T0000602:0;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22632375	22632490	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01358_ch_T0000602:1;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22632375	22632490	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG01358_ch_T0000602:1;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22632491	22635065	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG01358_ch_T0000602:1;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22635066	22635186	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01358_ch_T0000602:2;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22635066	22635134	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG01358_ch_T0000602:2;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22635132	22635134	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=start_codon:HG01358_ch_T0000602;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22635187	22646027	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG01358_ch_T0000602:2;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22646028	22646114	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01358_ch_T0000602:3;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22646115	22646215	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG01358_ch_T0000602:3;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22646216	22646303	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000602;gene_id=HG01358_ch_G0000207;Parent=HG01358_ch_T0000602;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01358_ch_T0000602:4;Name=PRY;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22651988	22697831	.	-	.	source_gene_common_name=LOC102725532;source_gene=hg002_chrY_paternal_487;alternative_source_transcripts=hg002_chrY_paternal_487.1;gene_id=HG01358_ch_G0000208;gene_biotype=lncRNA;gene_name=LOC102725532;gene_sources=liftoff;ID=HG01358_ch_G0000208;Name=LOC102725532
HG01358_chrY	CAT	transcript	22651988	22697831	1000	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_G0000208;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=HG01358_ch_T0000603;Name=LOC102725532
HG01358_chrY	CAT	exon	22651988	22652665	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:0;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22652666	22653180	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:0;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22653181	22653298	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:1;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22653299	22653842	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:1;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22653843	22654039	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:2;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22654040	22654159	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:2;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22654160	22654245	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:3;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22654246	22656045	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:3;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22656046	22656381	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:4;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22656382	22657847	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:4;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22657848	22657937	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:5;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22657938	22671579	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:5;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22671580	22671933	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:6;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22671934	22672363	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:6;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22672364	22672482	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:7;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22672483	22679660	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:7;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22679661	22679746	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:8;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22679747	22680054	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:8;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22680055	22680277	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:9;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22680278	22690240	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:9;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22690241	22690381	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:10;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22690382	22696930	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:10;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22696931	22697240	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:11;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22697241	22697574	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01358_ch_T0000603:11;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22697575	22697831	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG01358_ch_T0000603;gene_id=HG01358_ch_G0000208;Parent=HG01358_ch_T0000603;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01358_ch_T0000603:12;Name=LOC102725532;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22695256	22697122	.	+	.	source_gene_common_name=TTTY6;source_gene=hg002_chrY_paternal_504;gene_id=HG01358_ch_G0000209;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG01358_ch_G0000209;Name=TTTY6
HG01358_chrY	CAT	transcript	22695256	22697122	1000	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG01358_ch_T0000604;gene_id=HG01358_ch_G0000209;Parent=HG01358_ch_G0000209;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=HG01358_ch_T0000604;Name=TTTY6
HG01358_chrY	CAT	exon	22695256	22695370	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG01358_ch_T0000604;gene_id=HG01358_ch_G0000209;Parent=HG01358_ch_T0000604;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG01358_ch_T0000604:0;Name=TTTY6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22695371	22695588	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG01358_ch_T0000604;gene_id=HG01358_ch_G0000209;Parent=HG01358_ch_T0000604;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG01358_ch_T0000604:0;Name=TTTY6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22695589	22695726	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG01358_ch_T0000604;gene_id=HG01358_ch_G0000209;Parent=HG01358_ch_T0000604;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG01358_ch_T0000604:1;Name=TTTY6;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22695727	22696883	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG01358_ch_T0000604;gene_id=HG01358_ch_G0000209;Parent=HG01358_ch_T0000604;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG01358_ch_T0000604:1;Name=TTTY6;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22696884	22697122	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG01358_ch_T0000604;gene_id=HG01358_ch_G0000209;Parent=HG01358_ch_T0000604;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG01358_ch_T0000604:2;Name=TTTY6;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22711845	22733300	.	-	.	source_gene_common_name=RBMY1J;source_gene=hg002_chrY_paternal_489;alternative_source_transcripts=hg002_chrY_paternal_489.1;gene_id=HG01358_ch_G0000210;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000210;Name=RBMY1J
HG01358_chrY	CAT	transcript	22711845	22733300	100	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_G0000210;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG01358_ch_T0000605;Name=RBMY1J
HG01358_chrY	CAT	exon	22711845	22713348	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22713338	22713348	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22713338	22713340	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG01358_ch_T0000605;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22713349	22715941	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22715942	22716088	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22715942	22716088	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22716089	22719821	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22719822	22719910	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719822	22719910	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22719911	22719996	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22719997	22720107	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719997	22720107	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22720108	22721030	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22721031	22721141	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22721031	22721141	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22721142	22721575	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22721576	22721686	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22721576	22721686	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22721687	22722126	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22722127	22722237	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22722127	22722237	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22722238	22723192	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22723193	22723307	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22723193	22723307	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22723308	22725317	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22725318	22725470	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22725318	22725470	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22725471	22727385	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22727386	22727563	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22727386	22727563	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22727564	22730582	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22730583	22730686	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22730583	22730686	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22730687	22731152	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22731153	22731265	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:11;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22731153	22731261	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000605:11;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22731259	22731261	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG01358_ch_T0000605;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22731266	22733126	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000605:11;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22733127	22733300	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000605;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000605;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000605:12;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22718834	22730674	100	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_G0000210;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG01358_ch_T0000606;Name=RBMY1J
HG01358_chrY	CAT	exon	22718834	22719410	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719112	22719410	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000606:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22719112	22719114	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG01358_ch_T0000606;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22719411	22719821	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000606:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22719822	22719910	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719822	22719910	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000606:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22719911	22719996	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000606:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22719997	22720107	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719997	22720107	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000606:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22720108	22721030	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000606:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22721031	22721141	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22721031	22721141	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000606:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22721142	22721575	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000606:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22721576	22721686	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22721576	22721686	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000606:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22721687	22722126	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000606:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22722127	22722237	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22722127	22722237	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000606:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22722238	22723192	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000606:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22723193	22723307	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22723193	22723307	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000606:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22723308	22725317	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000606:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22725318	22725470	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22725318	22725441	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000606:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22725439	22725441	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG01358_ch_T0000606;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22725471	22730582	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000606:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22730583	22730674	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000606;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000606;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000606:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22718834	22733300	100	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_G0000210;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG01358_ch_T0000607;Name=RBMY1J
HG01358_chrY	CAT	exon	22718834	22719410	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719112	22719410	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22719112	22719114	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG01358_ch_T0000607;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22719411	22719821	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22719822	22719910	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719822	22719910	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22719911	22719996	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22719997	22720107	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719997	22720107	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22720108	22721030	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22721031	22721141	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22721031	22721141	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22721142	22721575	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22721576	22721686	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22721576	22721686	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22721687	22722126	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22722127	22722237	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22722127	22722237	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22722238	22723192	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22723193	22723307	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22723193	22723307	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22723308	22725317	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22725318	22725470	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22725318	22725470	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22725471	22727385	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22727386	22727563	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22727386	22727563	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22727564	22730582	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22730583	22730686	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22730583	22730686	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22730687	22731152	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22731153	22731265	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22731153	22731261	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000607:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22731259	22731261	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG01358_ch_T0000607;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22731266	22733126	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000607:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22733127	22733300	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000607;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000607;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000607:11;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22718834	22733300	100	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_G0000210;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG01358_ch_T0000608;Name=RBMY1J
HG01358_chrY	CAT	exon	22718834	22719410	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719112	22719410	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22719112	22719114	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG01358_ch_T0000608;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22719411	22719821	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22719822	22719910	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22719822	22719910	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22719911	22721030	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22721031	22721141	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22721031	22721141	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22721142	22721575	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22721576	22721686	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22721576	22721686	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22721687	22722126	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22722127	22722237	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22722127	22722237	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22722238	22723192	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22723193	22723307	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22723193	22723307	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22723308	22725317	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22725318	22725470	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22725318	22725470	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22725471	22727385	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22727386	22727563	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22727386	22727563	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22727564	22730582	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22730583	22730686	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22730583	22730686	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22730687	22731152	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22731153	22731265	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22731153	22731261	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01358_ch_T0000608:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22731259	22731261	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG01358_ch_T0000608;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22731266	22733126	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01358_ch_T0000608:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22733127	22733300	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000608;gene_id=HG01358_ch_G0000210;Parent=HG01358_ch_T0000608;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01358_ch_T0000608:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22847230	22849308	.	-	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;alternative_source_transcripts=hg002_chrY_paternal_497.1;gene_id=HG01358_ch_G0000211;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG01358_ch_G0000211;Name=TTTY5
HG01358_chrY	CAT	transcript	22847230	22849308	1000	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG01358_ch_T0000609;gene_id=HG01358_ch_G0000211;Parent=HG01358_ch_G0000211;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=HG01358_ch_T0000609;Name=TTTY5
HG01358_chrY	CAT	exon	22847230	22848220	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG01358_ch_T0000609;gene_id=HG01358_ch_G0000211;Parent=HG01358_ch_T0000609;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG01358_ch_T0000609:0;Name=TTTY5;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22848221	22848737	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG01358_ch_T0000609;gene_id=HG01358_ch_G0000211;Parent=HG01358_ch_T0000609;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:HG01358_ch_T0000609:0;Name=TTTY5;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22848738	22849308	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG01358_ch_T0000609;gene_id=HG01358_ch_G0000211;Parent=HG01358_ch_T0000609;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG01358_ch_T0000609:1;Name=TTTY5;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22859295	22866641	.	+	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1;gene_id=HG01358_ch_G0000212;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG01358_ch_G0000212;Name=RBMY2FP
HG01358_chrY	CAT	transcript	22859295	22866641	1000	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG01358_ch_T0000610;gene_id=HG01358_ch_G0000212;Parent=HG01358_ch_G0000212;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=HG01358_ch_T0000610;Name=RBMY2FP
HG01358_chrY	CAT	exon	22859295	22859406	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG01358_ch_T0000610;gene_id=HG01358_ch_G0000212;Parent=HG01358_ch_T0000610;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG01358_ch_T0000610:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22859407	22861295	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG01358_ch_T0000610;gene_id=HG01358_ch_G0000212;Parent=HG01358_ch_T0000610;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG01358_ch_T0000610:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22861296	22861408	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG01358_ch_T0000610;gene_id=HG01358_ch_G0000212;Parent=HG01358_ch_T0000610;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG01358_ch_T0000610:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22861409	22861830	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG01358_ch_T0000610;gene_id=HG01358_ch_G0000212;Parent=HG01358_ch_T0000610;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG01358_ch_T0000610:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22861831	22861934	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG01358_ch_T0000610;gene_id=HG01358_ch_G0000212;Parent=HG01358_ch_T0000610;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG01358_ch_T0000610:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22861935	22864928	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG01358_ch_T0000610;gene_id=HG01358_ch_G0000212;Parent=HG01358_ch_T0000610;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG01358_ch_T0000610:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22864929	22866641	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG01358_ch_T0000610;gene_id=HG01358_ch_G0000212;Parent=HG01358_ch_T0000610;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG01358_ch_T0000610:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22867114	22870820	.	+	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;alternative_source_transcripts=hg002_chrY_paternal_494.1;gene_id=HG01358_ch_G0000213;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=HG01358_ch_G0000213;Name=LOC100652931
HG01358_chrY	CAT	transcript	22867114	22870820	1000	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG01358_ch_T0000611;gene_id=HG01358_ch_G0000213;Parent=HG01358_ch_G0000213;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=HG01358_ch_T0000611;Name=LOC100652931
HG01358_chrY	CAT	exon	22867114	22867183	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG01358_ch_T0000611;gene_id=HG01358_ch_G0000213;Parent=HG01358_ch_T0000611;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG01358_ch_T0000611:0;Name=LOC100652931;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22867184	22869218	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG01358_ch_T0000611;gene_id=HG01358_ch_G0000213;Parent=HG01358_ch_T0000611;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG01358_ch_T0000611:0;Name=LOC100652931;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22869219	22869333	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG01358_ch_T0000611;gene_id=HG01358_ch_G0000213;Parent=HG01358_ch_T0000611;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG01358_ch_T0000611:1;Name=LOC100652931;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22869334	22870798	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG01358_ch_T0000611;gene_id=HG01358_ch_G0000213;Parent=HG01358_ch_T0000611;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG01358_ch_T0000611:1;Name=LOC100652931;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22870799	22870820	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG01358_ch_T0000611;gene_id=HG01358_ch_G0000213;Parent=HG01358_ch_T0000611;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG01358_ch_T0000611:2;Name=LOC100652931;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22953932	22973976	.	+	.	source_gene_common_name=RBMY1F;source_gene=hg002_chrY_paternal_502;alternative_source_transcripts=hg002_chrY_paternal_502.1;gene_id=HG01358_ch_G0000214;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000214;Name=RBMY1F
HG01358_chrY	CAT	transcript	22953932	22968319	100	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_G0000214;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01358_ch_T0000612;Name=RBMY1F
HG01358_chrY	CAT	exon	22953932	22954020	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22954021	22955881	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22955882	22955994	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22955886	22955994	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22955886	22955888	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01358_ch_T0000612;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22955995	22956462	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22956463	22956566	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22956463	22956566	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22956567	22959589	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22959590	22959767	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22959590	22959767	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22959768	22961682	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22961683	22961835	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22961683	22961835	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22961836	22963845	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22963846	22963960	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22963846	22963960	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22963961	22964915	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22964916	22965026	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22964916	22965026	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965027	22965466	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22965467	22965577	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22965467	22965577	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965578	22966011	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22966012	22966122	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22966012	22966122	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22966123	22967045	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967046	22967156	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967046	22967156	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967157	22967242	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967243	22967326	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967243	22967326	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967327	22967742	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000612:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967743	22968319	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000612:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967743	22967815	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000612:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22967813	22967815	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000612;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000612;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01358_ch_T0000612;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22953932	22968319	100	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_G0000214;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01358_ch_T0000613;Name=RBMY1F
HG01358_chrY	CAT	exon	22953932	22954020	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22954021	22955881	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22955882	22955994	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22955886	22955994	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22955886	22955888	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01358_ch_T0000613;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22955995	22956462	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22956463	22956566	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22956463	22956566	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22956567	22959589	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22959590	22959767	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22959590	22959767	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22959768	22961682	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22961683	22961835	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22961683	22961835	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22961836	22963845	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22963846	22963960	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22963846	22963960	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22963961	22964915	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22964916	22965026	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22964916	22965026	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965027	22965466	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22965467	22965577	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22965467	22965577	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965578	22966011	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22966012	22966122	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22966012	22966122	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22966123	22967242	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967243	22967331	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967243	22967331	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967332	22967742	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000613:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967743	22968319	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000613:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967743	22968041	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000613:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22968039	22968041	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000613;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000613;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01358_ch_T0000613;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22953932	22968319	100	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_G0000214;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01358_ch_T0000614;Name=RBMY1F
HG01358_chrY	CAT	exon	22953932	22954020	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22954021	22955881	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22955882	22955994	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22955886	22955994	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22955886	22955888	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01358_ch_T0000614;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22955995	22956462	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22956463	22956566	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22956463	22956566	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22956567	22959589	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22959590	22959767	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22959590	22959767	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22959768	22961682	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22961683	22961835	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22961683	22961835	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22961836	22963845	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22963846	22963960	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22963846	22963960	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22963961	22964915	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22964916	22965026	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22964916	22965026	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965027	22965466	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22965467	22965577	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22965467	22965577	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965578	22966011	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22966012	22966122	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22966012	22966122	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22966123	22967045	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967046	22967156	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967046	22967156	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967157	22967242	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967243	22967331	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967243	22967331	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967332	22967742	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000614:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967743	22968319	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000614:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967743	22968041	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000614:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22968039	22968041	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000614;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000614;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01358_ch_T0000614;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22953932	22973976	100	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_G0000214;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01358_ch_T0000615;Name=RBMY1F
HG01358_chrY	CAT	exon	22953932	22954020	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22954021	22955881	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22955882	22955994	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22955886	22955994	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22955886	22955888	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01358_ch_T0000615;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22955995	22956462	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22956463	22956566	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22956463	22956566	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22956567	22959589	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22959590	22959767	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22959590	22959767	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22959768	22961682	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22961683	22961835	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22961683	22961835	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22961836	22963845	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22963846	22963960	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22963846	22963960	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22963961	22964915	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22964916	22965026	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22964916	22965026	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965027	22965466	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22965467	22965577	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22965467	22965577	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965578	22966011	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22966012	22966122	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22966012	22966122	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22966123	22967045	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967046	22967156	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967046	22967156	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967157	22967242	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967243	22967331	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967243	22967331	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967332	22971064	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22971065	22971211	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22971065	22971211	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22971212	22973804	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000615:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22973805	22973976	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000615:12;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22973805	22973815	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000615:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22973813	22973815	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000615;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000615;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01358_ch_T0000615;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22953932	22973976	100	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_G0000214;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01358_ch_T0000616;Name=RBMY1F
HG01358_chrY	CAT	exon	22953932	22954020	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22954021	22955881	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22955882	22955994	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22955886	22955994	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22955886	22955888	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01358_ch_T0000616;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22955995	22956462	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22956463	22956566	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22956463	22956566	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22956567	22959589	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22959590	22959767	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22959590	22959767	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22959768	22961682	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22961683	22961835	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22961683	22961835	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22961836	22963845	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22963846	22963960	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22963846	22963960	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22963961	22964915	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22964916	22965026	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22964916	22965026	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965027	22965466	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22965467	22965577	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22965467	22965577	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965578	22966011	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22966012	22966122	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22966012	22966122	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22966123	22967242	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967243	22967331	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967243	22967331	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967332	22971064	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22971065	22971211	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22971065	22971211	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22971212	22973804	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000616:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22973805	22973976	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000616:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22973805	22973815	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000616:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22973813	22973815	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000616;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000616;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01358_ch_T0000616;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	22953932	22973976	100	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_G0000214;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01358_ch_T0000617;Name=RBMY1F
HG01358_chrY	CAT	exon	22953932	22954020	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22954021	22955881	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22955882	22955994	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22955886	22955994	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	22955886	22955888	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01358_ch_T0000617;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22955995	22956462	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22956463	22956566	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22956463	22956566	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22956567	22959589	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22959590	22959767	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22959590	22959767	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22959768	22961682	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22961683	22961835	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22961683	22961835	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22961836	22963845	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22963846	22963960	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22963846	22963960	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22963961	22964915	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22964916	22965026	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22964916	22965026	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965027	22965466	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22965467	22965577	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22965467	22965577	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22965578	22966011	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22966012	22966122	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22966012	22966122	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22966123	22967242	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22967243	22967331	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22967243	22967331	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22967332	22973804	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01358_ch_T0000617:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22973805	22973976	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01358_ch_T0000617:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	22973805	22973815	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01358_ch_T0000617:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	22973813	22973815	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000617;gene_id=HG01358_ch_G0000214;Parent=HG01358_ch_T0000617;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01358_ch_T0000617;Name=RBMY1F;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22989378	23035145	.	+	.	source_gene_common_name=LOC101929148;source_gene=hg002_chrY_paternal_503;alternative_source_transcripts=hg002_chrY_paternal_503.1;gene_id=HG01358_ch_G0000215;gene_biotype=lncRNA;gene_name=LOC101929148;gene_sources=liftoff;ID=HG01358_ch_G0000215;Name=LOC101929148
HG01358_chrY	CAT	transcript	22989378	23035145	1000	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_G0000215;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=HG01358_ch_T0000618;Name=LOC101929148
HG01358_chrY	CAT	exon	22989378	22989578	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:0;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22989579	22989912	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:0;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22989913	22990222	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:1;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22990223	22996767	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:1;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22996768	22996908	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:2;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22996909	23006867	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:2;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23006868	23007090	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:3;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23007091	23007398	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:3;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23007399	23007484	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:4;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23007485	23014663	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:4;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23014664	23014782	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:5;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23014783	23015212	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:5;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23015213	23015566	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:6;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23015567	23029195	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:6;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23029196	23029285	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:7;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23029286	23030751	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:7;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23030752	23031087	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:8;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23031088	23032887	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:8;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23032888	23032973	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:9;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23032974	23033093	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:9;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23033094	23033290	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:10;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23033291	23033834	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:10;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23033835	23033952	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:11;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23033953	23034467	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01358_ch_T0000618:11;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23034468	23035145	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG01358_ch_T0000618;gene_id=HG01358_ch_G0000215;Parent=HG01358_ch_T0000618;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01358_ch_T0000618:12;Name=LOC101929148;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	22990028	22991875	.	-	.	source_gene_common_name=TTTY6B;source_gene=hg002_chrY_paternal_488;gene_id=HG01358_ch_G0000216;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG01358_ch_G0000216;Name=TTTY6B
HG01358_chrY	CAT	transcript	22990028	22991875	1000	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG01358_ch_T0000619;gene_id=HG01358_ch_G0000216;Parent=HG01358_ch_G0000216;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=HG01358_ch_T0000619;Name=TTTY6B
HG01358_chrY	CAT	exon	22990028	22990269	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG01358_ch_T0000619;gene_id=HG01358_ch_G0000216;Parent=HG01358_ch_T0000619;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG01358_ch_T0000619:0;Name=TTTY6B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22990270	22991426	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG01358_ch_T0000619;gene_id=HG01358_ch_G0000216;Parent=HG01358_ch_T0000619;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG01358_ch_T0000619:0;Name=TTTY6B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22991427	22991564	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG01358_ch_T0000619;gene_id=HG01358_ch_G0000216;Parent=HG01358_ch_T0000619;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG01358_ch_T0000619:1;Name=TTTY6B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	22991565	22991782	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG01358_ch_T0000619;gene_id=HG01358_ch_G0000216;Parent=HG01358_ch_T0000619;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG01358_ch_T0000619:1;Name=TTTY6B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	22991783	22991875	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG01358_ch_T0000619;gene_id=HG01358_ch_G0000216;Parent=HG01358_ch_T0000619;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG01358_ch_T0000619:2;Name=TTTY6B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23040828	23065069	.	+	.	source_gene_common_name=PRY2;source_gene=hg002_chrY_paternal_505;alternative_source_transcripts=hg002_chrY_paternal_505.1;gene_id=HG01358_ch_G0000217;gene_biotype=protein_coding;gene_name=PRY2;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000217;Name=PRY2
HG01358_chrY	CAT	transcript	23040828	23065069	100	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_G0000217;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=HG01358_ch_T0000620;Name=PRY2
HG01358_chrY	CAT	exon	23040828	23040915	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01358_ch_T0000620:0;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23040916	23041016	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG01358_ch_T0000620:0;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23041017	23041103	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01358_ch_T0000620:1;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23041104	23051944	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG01358_ch_T0000620:1;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23051945	23052065	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01358_ch_T0000620:2;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23051997	23052065	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG01358_ch_T0000620:0;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23051997	23051999	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=start_codon:HG01358_ch_T0000620;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23052066	23054640	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG01358_ch_T0000620:2;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23054641	23054756	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01358_ch_T0000620:3;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23054641	23054756	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG01358_ch_T0000620:1;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23054757	23064243	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG01358_ch_T0000620:3;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23064244	23065069	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01358_ch_T0000620:4;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23064244	23064502	.	+	1	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG01358_ch_T0000620:2;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23064500	23064502	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000620;gene_id=HG01358_ch_G0000217;Parent=HG01358_ch_T0000620;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=stop_codon:HG01358_ch_T0000620;Name=PRY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23106481	23108508	.	-	.	source_gene_common_name=LOC107987356;source_gene=hg002_chrY_paternal_481;gene_id=HG01358_ch_G0000218;gene_biotype=lncRNA;gene_name=LOC107987356;gene_sources=liftoff;ID=HG01358_ch_G0000218;Name=LOC107987356
HG01358_chrY	CAT	transcript	23106481	23108508	1000	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG01358_ch_T0000621;gene_id=HG01358_ch_G0000218;Parent=HG01358_ch_G0000218;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=HG01358_ch_T0000621;Name=LOC107987356
HG01358_chrY	CAT	exon	23106481	23106682	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG01358_ch_T0000621;gene_id=HG01358_ch_G0000218;Parent=HG01358_ch_T0000621;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG01358_ch_T0000621:0;Name=LOC107987356;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23106683	23108217	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG01358_ch_T0000621;gene_id=HG01358_ch_G0000218;Parent=HG01358_ch_T0000621;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG01358_ch_T0000621:0;Name=LOC107987356;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23108218	23108278	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG01358_ch_T0000621;gene_id=HG01358_ch_G0000218;Parent=HG01358_ch_T0000621;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG01358_ch_T0000621:1;Name=LOC107987356;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23108279	23108395	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG01358_ch_T0000621;gene_id=HG01358_ch_G0000218;Parent=HG01358_ch_T0000621;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG01358_ch_T0000621:1;Name=LOC107987356;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23108396	23108508	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG01358_ch_T0000621;gene_id=HG01358_ch_G0000218;Parent=HG01358_ch_T0000621;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG01358_ch_T0000621:2;Name=LOC107987356;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23336634	23347871	.	+	.	source_gene_common_name=LOC107987348;source_gene=hg002_chrY_paternal_515;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;gene_id=HG01358_ch_G0000219;gene_biotype=lncRNA;gene_name=LOC107987348;gene_sources=liftoff;ID=HG01358_ch_G0000219;Name=LOC107987348
HG01358_chrY	CAT	transcript	23336634	23347871	1000	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01358_ch_T0000622;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_G0000219;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG01358_ch_T0000622;Name=LOC107987348
HG01358_chrY	CAT	exon	23336634	23337089	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01358_ch_T0000622;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000622;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01358_ch_T0000622:0;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23337090	23343058	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01358_ch_T0000622;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000622;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG01358_ch_T0000622:0;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23343059	23345223	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01358_ch_T0000622;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000622;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01358_ch_T0000622:1;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23345224	23345864	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01358_ch_T0000622;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000622;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG01358_ch_T0000622:1;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23345865	23347871	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01358_ch_T0000622;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000622;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01358_ch_T0000622:2;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23336634	23347871	1000	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01358_ch_T0000623;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_G0000219;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG01358_ch_T0000623;Name=LOC107987348
HG01358_chrY	CAT	exon	23336634	23337089	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01358_ch_T0000623;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000623;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01358_ch_T0000623:0;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23337090	23342590	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01358_ch_T0000623;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000623;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG01358_ch_T0000623:0;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23342591	23345223	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01358_ch_T0000623;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000623;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01358_ch_T0000623:1;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23345224	23345864	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01358_ch_T0000623;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000623;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG01358_ch_T0000623:1;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23345865	23347871	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01358_ch_T0000623;gene_id=HG01358_ch_G0000219;Parent=HG01358_ch_T0000623;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01358_ch_T0000623:2;Name=LOC107987348;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23402004	23403135	.	+	.	source_gene_common_name=TTTY17A;source_gene=hg002_chrY_paternal_516;alternative_source_transcripts=hg002_chrY_paternal_516.1;gene_id=HG01358_ch_G0000220;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG01358_ch_G0000220;Name=TTTY17A
HG01358_chrY	CAT	transcript	23402004	23403135	1000	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG01358_ch_T0000624;gene_id=HG01358_ch_G0000220;Parent=HG01358_ch_G0000220;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=HG01358_ch_T0000624;Name=TTTY17A
HG01358_chrY	CAT	exon	23402004	23402063	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG01358_ch_T0000624;gene_id=HG01358_ch_G0000220;Parent=HG01358_ch_T0000624;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG01358_ch_T0000624:0;Name=TTTY17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23402064	23403029	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG01358_ch_T0000624;gene_id=HG01358_ch_G0000220;Parent=HG01358_ch_T0000624;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=intron:HG01358_ch_T0000624:0;Name=TTTY17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23403030	23403135	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG01358_ch_T0000624;gene_id=HG01358_ch_G0000220;Parent=HG01358_ch_T0000624;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG01358_ch_T0000624:1;Name=TTTY17A;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23486875	23523700	.	+	.	source_gene_common_name=TTTY4C;source_gene=hg002_chrY_paternal_519;alternative_source_transcripts=hg002_chrY_paternal_519.1;gene_id=HG01358_ch_G0000221;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG01358_ch_G0000221;Name=TTTY4C
HG01358_chrY	CAT	transcript	23486875	23523700	1000	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG01358_ch_T0000625;gene_id=HG01358_ch_G0000221;Parent=HG01358_ch_G0000221;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=HG01358_ch_T0000625;Name=TTTY4C
HG01358_chrY	CAT	exon	23486875	23487035	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG01358_ch_T0000625;gene_id=HG01358_ch_G0000221;Parent=HG01358_ch_T0000625;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG01358_ch_T0000625:0;Name=TTTY4C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23487036	23514043	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG01358_ch_T0000625;gene_id=HG01358_ch_G0000221;Parent=HG01358_ch_T0000625;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG01358_ch_T0000625:0;Name=TTTY4C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23514044	23514119	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG01358_ch_T0000625;gene_id=HG01358_ch_G0000221;Parent=HG01358_ch_T0000625;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG01358_ch_T0000625:1;Name=TTTY4C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23514120	23515923	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG01358_ch_T0000625;gene_id=HG01358_ch_G0000221;Parent=HG01358_ch_T0000625;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG01358_ch_T0000625:1;Name=TTTY4C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23515924	23516031	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG01358_ch_T0000625;gene_id=HG01358_ch_G0000221;Parent=HG01358_ch_T0000625;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG01358_ch_T0000625:2;Name=TTTY4C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23516032	23522699	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG01358_ch_T0000625;gene_id=HG01358_ch_G0000221;Parent=HG01358_ch_T0000625;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG01358_ch_T0000625:2;Name=TTTY4C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23522700	23523700	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG01358_ch_T0000625;gene_id=HG01358_ch_G0000221;Parent=HG01358_ch_T0000625;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG01358_ch_T0000625:3;Name=TTTY4C;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23534679	23555882	.	+	.	source_gene_common_name=BPY2B;source_gene=hg002_chrY_paternal_533;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;gene_id=HG01358_ch_G0000222;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG01358_ch_G0000222;Name=BPY2B
HG01358_chrY	CAT	transcript	23534679	23555882	100	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_G0000222;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=HG01358_ch_T0000626;Name=BPY2B
HG01358_chrY	CAT	exon	23534679	23534709	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:0;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23534710	23534984	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01358_ch_T0000626:0;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23534985	23535107	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:1;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23535108	23538172	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01358_ch_T0000626:1;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23538173	23538309	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:2;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23538310	23542718	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01358_ch_T0000626:2;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23542719	23542837	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:3;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23542760	23542837	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG01358_ch_T0000626:0;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23542760	23542762	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=start_codon:HG01358_ch_T0000626;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23542838	23544896	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01358_ch_T0000626:3;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23544897	23545014	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:4;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23544897	23545014	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG01358_ch_T0000626:1;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23545015	23547868	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01358_ch_T0000626:4;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23547869	23547974	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:5;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23547869	23547974	.	+	2	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG01358_ch_T0000626:2;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23547975	23548666	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01358_ch_T0000626:5;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23548667	23548791	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:6;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23548667	23548685	.	+	1	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG01358_ch_T0000626:3;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23548683	23548685	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=stop_codon:HG01358_ch_T0000626;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23548792	23555341	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01358_ch_T0000626:6;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23555342	23555466	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:7;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23555467	23555560	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01358_ch_T0000626:7;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23555561	23555882	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;transcript_id=HG01358_ch_T0000626;gene_id=HG01358_ch_G0000222;Parent=HG01358_ch_T0000626;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01358_ch_T0000626:8;Name=BPY2B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23656818	23660155	.	-	.	source_gene_common_name=LOC105377242;source_gene=hg002_chrY_paternal_528;gene_id=HG01358_ch_G0000223;gene_biotype=lncRNA;gene_name=LOC105377242;gene_sources=liftoff;ID=HG01358_ch_G0000223;Name=LOC105377242
HG01358_chrY	CAT	transcript	23656818	23660155	1000	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000627;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_G0000223;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG01358_ch_T0000627;Name=LOC105377242
HG01358_chrY	CAT	exon	23656818	23656918	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000627;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000627;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01358_ch_T0000627:0;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23656919	23659249	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000627;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000627;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG01358_ch_T0000627:0;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23659250	23659314	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000627;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000627;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01358_ch_T0000627:1;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23659315	23659976	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000627;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000627;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG01358_ch_T0000627:1;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23659977	23660155	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000627;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000627;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01358_ch_T0000627:2;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23656818	23660155	1000	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000628;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_G0000223;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG01358_ch_T0000628;Name=LOC105377242
HG01358_chrY	CAT	exon	23656818	23656918	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000628;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000628;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01358_ch_T0000628:0;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23656919	23659276	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000628;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000628;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG01358_ch_T0000628:0;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23659277	23659314	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000628;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000628;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01358_ch_T0000628:1;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23659315	23659976	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000628;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000628;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG01358_ch_T0000628:1;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23659977	23660155	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG01358_ch_T0000628;gene_id=HG01358_ch_G0000223;Parent=HG01358_ch_T0000628;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01358_ch_T0000628:2;Name=LOC105377242;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23679778	23749435	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;alternative_source_transcripts=hg002_chrY_paternal_526.1;gene_id=HG01358_ch_G0000224;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=augTM,transMap;ID=HG01358_ch_G0000224;Name=DAZ3
HG01358_chrY	CAT	transcript	23679778	23749435	9950	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_G0000224;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG01358_ch_T0000629;Name=DAZ3
HG01358_chrY	CAT	exon	23679778	23681634	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:0;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23681635	23685597	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:0;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23685598	23685696	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:1;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23685633	23685696	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:0;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23685633	23685635	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG01358_ch_T0000629;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23685697	23690269	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:1;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23690270	23690304	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:2;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23690270	23690304	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:1;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23690305	23691048	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:2;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23691049	23691120	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:3;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23691049	23691120	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:2;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23691121	23703219	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:3;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23703220	23703291	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:4;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23703220	23703291	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:3;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23703292	23705596	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:4;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23705597	23705668	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:5;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23705597	23705668	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:4;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23705669	23707992	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:5;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23707993	23708064	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:6;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23707993	23708064	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:5;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23708065	23710375	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:6;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23710376	23710447	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:7;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23710376	23710447	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:6;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23710448	23712771	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:7;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23712772	23712843	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:8;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23712772	23712843	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:7;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23712844	23715162	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:8;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23715163	23715234	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:9;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23715163	23715234	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:8;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23715235	23717607	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:9;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23717608	23717679	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:10;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23717608	23717679	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:9;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23717680	23729923	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:10;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23729924	23730063	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:11;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23729924	23730063	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:10;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23730064	23730152	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:11;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23730153	23730216	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:12;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23730153	23730216	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:11;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23730217	23730652	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:12;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23730653	23730704	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:13;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23730653	23730704	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:12;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23730705	23731264	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:13;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23731265	23731356	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:14;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23731265	23731356	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:13;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23731357	23731630	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:14;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23731631	23731777	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:15;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23731631	23731777	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:14;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23731778	23749224	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000629:15;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23749225	23749435	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000629:16;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23749225	23749227	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000629:15;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23749225	23749227	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000629;gene_id=HG01358_ch_G0000224;Parent=HG01358_ch_T0000629;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG01358_ch_T0000629;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23769884	23841782	.	+	.	source_gene_common_name=DAZ2;source_gene=hg002_chrY_paternal_601;gene_id=HG01358_ch_G0000225;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=liftoff;ID=HG01358_ch_G0000225;Name=DAZ2
HG01358_chrY	CAT	transcript	23769884	23841782	100	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_G0000225;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000630;Name=DAZ2
HG01358_chrY	CAT	exon	23769884	23770170	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000630;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23770171	23776770	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23776771	23776917	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23776771	23776917	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23776918	23777191	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777192	23777283	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777192	23777283	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777284	23777843	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777844	23777895	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777844	23777895	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777896	23778331	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778332	23778395	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778332	23778395	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778396	23778484	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778485	23778624	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778485	23778624	.	+	2	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778625	23780024	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23780025	23780096	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23780025	23780096	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23780097	23782468	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23782469	23782540	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23782469	23782540	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23782541	23784859	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23784860	23784931	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23784860	23784931	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23784932	23787255	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23787256	23787327	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23787256	23787327	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23787328	23801570	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23801571	23801642	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23801571	23801642	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23801643	23816132	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23816133	23816204	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23816133	23816204	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23816205	23818516	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23818517	23818588	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23818517	23818588	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23818589	23820900	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23820901	23820972	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23820901	23820972	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23820973	23823285	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23823286	23823357	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23823286	23823357	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23823358	23828053	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23828054	23828125	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23828054	23828125	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23828126	23830438	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23830439	23830510	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23830439	23830510	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23830511	23831254	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23831255	23831289	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23831255	23831289	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23831290	23835863	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23835864	23835962	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23835864	23835927	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000630:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23835925	23835927	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000630;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23835963	23839925	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000630:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23839926	23841782	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000630;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000630:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23769884	23841782	100	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_G0000225;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000631;Name=DAZ2
HG01358_chrY	CAT	exon	23769884	23770170	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000631;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23770171	23776770	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23776771	23776917	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23776771	23776917	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23776918	23777191	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777192	23777283	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777192	23777283	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777284	23777843	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777844	23777895	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777844	23777895	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777896	23778331	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778332	23778395	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778332	23778395	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778396	23778484	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778485	23778624	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778485	23778624	.	+	2	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778625	23780024	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23780025	23780096	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23780025	23780096	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23780097	23782468	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23782469	23782540	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23782469	23782540	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23782541	23801570	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23801571	23801642	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23801571	23801642	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23801643	23816132	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23816133	23816204	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23816133	23816204	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23816205	23818516	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23818517	23818588	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23818517	23818588	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23818589	23820900	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23820901	23820972	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23820901	23820972	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23820973	23830438	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23830439	23830510	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23830439	23830510	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23830511	23831254	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23831255	23831289	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23831255	23831289	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23831290	23835863	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23835864	23835962	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23835864	23835927	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000631:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23835925	23835927	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000631;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23835963	23839925	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000631:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23839926	23841782	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000631;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000631:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23769884	23841782	100	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_G0000225;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000632;Name=DAZ2
HG01358_chrY	CAT	exon	23769884	23770170	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000632;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23770171	23776770	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23776771	23776917	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23776771	23776917	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23776918	23777191	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777192	23777283	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777192	23777283	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777284	23777843	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777844	23777895	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777844	23777895	.	+	1	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777896	23778331	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778332	23778395	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778332	23778395	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778396	23778484	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778485	23778624	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778485	23778624	.	+	2	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778625	23780024	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23780025	23780096	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23780025	23780096	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23780097	23782468	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23782469	23782540	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23782469	23782540	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23782541	23784859	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23784860	23784931	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23784860	23784931	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23784932	23787255	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23787256	23787327	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23787256	23787327	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23787328	23801570	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23801571	23801642	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23801571	23801642	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23801643	23806343	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23806344	23806415	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23806344	23806415	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23806416	23816132	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23816133	23816204	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23816133	23816204	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23816205	23818516	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23818517	23818588	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23818517	23818588	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23818589	23820900	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23820901	23820972	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23820901	23820972	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23820973	23823285	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23823286	23823357	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23823286	23823357	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23823358	23828053	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23828054	23828125	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23828054	23828125	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23828126	23830438	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23830439	23830510	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23830439	23830510	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23830511	23831254	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23831255	23831289	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23831255	23831289	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23831290	23835863	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23835864	23835962	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23835864	23835927	.	+	1	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000632:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23835925	23835927	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000632;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23835963	23839925	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000632:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23839926	23841782	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000632;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000632;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000632:20;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23769960	23841782	100	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_G0000225;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000633;Name=DAZ2
HG01358_chrY	CAT	exon	23769960	23770170	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000633;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23770171	23776770	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23776771	23776917	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23776771	23776917	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23776918	23777191	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777192	23777283	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777192	23777283	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777284	23777843	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777844	23777895	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777844	23777895	.	+	1	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777896	23778331	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778332	23778395	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778332	23778395	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778396	23778484	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778485	23778624	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778485	23778624	.	+	2	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778625	23780024	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23780025	23780096	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23780025	23780096	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23780097	23782468	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23782469	23782540	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23782469	23782540	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23782541	23784859	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23784860	23784931	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23784860	23784931	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23784932	23787255	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23787256	23787327	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23787256	23787327	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23787328	23801570	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23801571	23801642	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23801571	23801642	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23801643	23803966	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23803967	23804038	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23803967	23804038	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23804039	23806343	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23806344	23806415	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23806344	23806415	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23806416	23816132	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23816133	23816204	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23816133	23816204	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23816205	23818516	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23818517	23818588	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23818517	23818588	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23818589	23820900	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23820901	23820972	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23820901	23820972	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23820973	23823285	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23823286	23823357	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23823286	23823357	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23823358	23830438	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23830439	23830510	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23830439	23830510	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23830511	23831254	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23831255	23831289	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23831255	23831289	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23831290	23835863	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23835864	23835962	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23835864	23835927	.	+	1	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000633:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23835925	23835927	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000633;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23835963	23839925	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000633:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23839926	23841782	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000633;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000633;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000633:20;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23769960	23841782	100	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_G0000225;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000634;Name=DAZ2
HG01358_chrY	CAT	exon	23769960	23770170	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000634;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23770171	23776770	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23776771	23776917	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23776771	23776917	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23776918	23777191	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777192	23777283	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777192	23777283	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777284	23777843	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777844	23777895	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777844	23777895	.	+	1	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777896	23778331	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778332	23778395	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778332	23778395	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778396	23778484	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778485	23778624	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778485	23778624	.	+	2	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778625	23780024	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23780025	23780096	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23780025	23780096	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23780097	23782468	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23782469	23782540	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23782469	23782540	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23782541	23784859	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23784860	23784931	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23784860	23784931	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23784932	23787255	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23787256	23787327	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23787256	23787327	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23787328	23801570	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23801571	23801642	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23801571	23801642	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23801643	23803966	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23803967	23804038	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23803967	23804038	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23804039	23806343	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23806344	23806415	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23806344	23806415	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23806416	23816132	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23816133	23816204	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23816133	23816204	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23816205	23818516	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23818517	23818588	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23818517	23818588	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23818589	23820900	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23820901	23820972	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23820901	23820972	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23820973	23823285	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23823286	23823357	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23823286	23823357	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23823358	23828053	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23828054	23828125	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23828054	23828125	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23828126	23830438	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23830439	23830510	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23830439	23830510	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23830511	23831254	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23831255	23831289	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23831255	23831289	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23831290	23835863	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23835864	23835962	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:20;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23835864	23835927	.	+	1	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000634:20;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23835925	23835927	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000634;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23835963	23839925	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000634:20;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23839926	23841782	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000634;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000634;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000634:21;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23769960	23841782	100	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_G0000225;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000635;Name=DAZ2
HG01358_chrY	CAT	exon	23769960	23770170	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000635;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23770171	23776770	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23776771	23776917	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23776771	23776917	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23776918	23777191	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777192	23777283	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777192	23777283	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777284	23777843	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777844	23777895	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777844	23777895	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777896	23778331	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778332	23778395	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778332	23778395	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778396	23778484	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778485	23778624	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778485	23778624	.	+	2	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778625	23780024	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23780025	23780096	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23780025	23780096	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23780097	23782468	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23782469	23782540	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23782469	23782540	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23782541	23784859	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23784860	23784931	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23784860	23784931	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23784932	23787255	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23787256	23787327	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23787256	23787327	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23787328	23801570	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23801571	23801642	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23801571	23801642	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23801643	23806343	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23806344	23806415	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23806344	23806415	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23806416	23816132	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23816133	23816204	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23816133	23816204	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23816205	23818516	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23818517	23818588	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23818517	23818588	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23818589	23820900	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23820901	23820972	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23820901	23820972	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23820973	23823285	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23823286	23823357	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23823286	23823357	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23823358	23828053	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23828054	23828125	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23828054	23828125	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23828126	23830438	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23830439	23830510	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23830439	23830510	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23830511	23831254	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23831255	23831289	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23831255	23831289	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23831290	23835863	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23835864	23835962	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23835864	23835927	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000635:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23835925	23835927	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000635;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23835963	23839925	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000635:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23839926	23841782	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000635;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000635;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000635:20;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23769960	23841782	100	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_G0000225;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000636;Name=DAZ2
HG01358_chrY	CAT	exon	23769960	23770170	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	23770168	23770170	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000636;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23770171	23777191	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777192	23777283	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777192	23777283	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777284	23777843	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23777844	23777895	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23777844	23777895	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23777896	23778331	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778332	23778395	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778332	23778395	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778396	23778484	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23778485	23778624	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23778485	23778624	.	+	2	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23778625	23780024	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23780025	23780096	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23780025	23780096	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23780097	23782468	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23782469	23782540	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23782469	23782540	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23782541	23784859	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23784860	23784931	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23784860	23784931	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23784932	23787255	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23787256	23787327	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23787256	23787327	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23787328	23801570	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23801571	23801642	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23801571	23801642	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23801643	23803966	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23803967	23804038	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23803967	23804038	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23804039	23806343	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23806344	23806415	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23806344	23806415	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23806416	23816132	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23816133	23816204	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23816133	23816204	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23816205	23818516	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23818517	23818588	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23818517	23818588	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23818589	23820900	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23820901	23820972	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23820901	23820972	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23820973	23823285	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23823286	23823357	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23823286	23823357	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23823358	23828053	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23828054	23828125	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23828054	23828125	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23828126	23830438	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23830439	23830510	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23830439	23830510	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23830511	23831254	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:17;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23831255	23831289	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23831255	23831289	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23831290	23835863	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:18;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23835864	23835962	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	23835864	23835927	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000636:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	23835925	23835927	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000636;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23835963	23839925	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000636:19;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23839926	23841782	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000636;gene_id=HG01358_ch_G0000225;Parent=HG01358_ch_T0000636;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000636:20;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23861406	23864743	.	+	.	source_gene_common_name=LOC105377239;source_gene=hg002_chrY_paternal_602;gene_id=HG01358_ch_G0000226;gene_biotype=lncRNA;gene_name=LOC105377239;gene_sources=liftoff;ID=HG01358_ch_G0000226;Name=LOC105377239
HG01358_chrY	CAT	transcript	23861406	23864743	1000	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000637;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_G0000226;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG01358_ch_T0000637;Name=LOC105377239
HG01358_chrY	CAT	exon	23861406	23861584	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000637;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000637;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01358_ch_T0000637:0;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23861585	23862246	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000637;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000637;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG01358_ch_T0000637:0;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23862247	23862311	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000637;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000637;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01358_ch_T0000637:1;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23862312	23864642	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000637;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000637;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG01358_ch_T0000637:1;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23864643	23864743	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000637;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000637;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01358_ch_T0000637:2;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	23861406	23864743	1000	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000638;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_G0000226;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG01358_ch_T0000638;Name=LOC105377239
HG01358_chrY	CAT	exon	23861406	23861584	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000638;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000638;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01358_ch_T0000638:0;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23861585	23862246	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000638;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000638;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG01358_ch_T0000638:0;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23862247	23862284	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000638;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000638;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01358_ch_T0000638:1;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23862285	23864642	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000638;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000638;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG01358_ch_T0000638:1;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	23864643	23864743	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG01358_ch_T0000638;gene_id=HG01358_ch_G0000226;Parent=HG01358_ch_T0000638;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01358_ch_T0000638:2;Name=LOC105377239;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23973525	23973662	.	-	.	source_gene_common_name=LOC124900506;source_gene=hg002_chrY_paternal_597;alternative_source_transcripts=hg002_chrY_paternal_597.1;gene_id=HG01358_ch_G0000227;gene_biotype=snoRNA;gene_name=LOC124900506;gene_sources=liftoff;ID=HG01358_ch_G0000227;Name=LOC124900506
HG01358_chrY	CAT	transcript	23973525	23973662	1000	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG01358_ch_T0000639;gene_id=HG01358_ch_G0000227;Parent=HG01358_ch_G0000227;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=HG01358_ch_T0000639;Name=LOC124900506
HG01358_chrY	CAT	exon	23973525	23973662	.	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG01358_ch_T0000639;gene_id=HG01358_ch_G0000227;Parent=HG01358_ch_T0000639;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=exon:HG01358_ch_T0000639:0;Name=LOC124900506;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	23985669	24027171	.	+	.	source_gene_common_name=REREP1Y;source_gene=hg002_chrY_paternal_596;alternative_source_transcripts=hg002_chrY_paternal_596.1;gene_id=HG01358_ch_G0000228;gene_biotype=transcribed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG01358_ch_G0000228;Name=REREP1Y
HG01358_chrY	CAT	transcript	23985669	24027171	1000	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG01358_ch_T0000640;gene_id=HG01358_ch_G0000228;Parent=HG01358_ch_G0000228;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=HG01358_ch_T0000640;Name=REREP1Y
HG01358_chrY	CAT	exon	23985669	23986071	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG01358_ch_T0000640;gene_id=HG01358_ch_G0000228;Parent=HG01358_ch_T0000640;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG01358_ch_T0000640:0;Name=REREP1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	23986072	24012890	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG01358_ch_T0000640;gene_id=HG01358_ch_G0000228;Parent=HG01358_ch_T0000640;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG01358_ch_T0000640:0;Name=REREP1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24012891	24012963	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG01358_ch_T0000640;gene_id=HG01358_ch_G0000228;Parent=HG01358_ch_T0000640;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG01358_ch_T0000640:1;Name=REREP1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24012964	24022581	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG01358_ch_T0000640;gene_id=HG01358_ch_G0000228;Parent=HG01358_ch_T0000640;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG01358_ch_T0000640:1;Name=REREP1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24022582	24027171	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG01358_ch_T0000640;gene_id=HG01358_ch_G0000228;Parent=HG01358_ch_T0000640;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG01358_ch_T0000640:2;Name=REREP1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24188612	24191736	.	+	.	source_gene_common_name=LOC107987349;source_gene=hg002_chrY_paternal_593;alternative_source_transcripts=hg002_chrY_paternal_593.1;gene_id=HG01358_ch_G0000229;gene_biotype=lncRNA;gene_name=LOC107987349;gene_sources=liftoff;ID=HG01358_ch_G0000229;Name=LOC107987349
HG01358_chrY	CAT	transcript	24188612	24191736	1000	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG01358_ch_T0000641;gene_id=HG01358_ch_G0000229;Parent=HG01358_ch_G0000229;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=HG01358_ch_T0000641;Name=LOC107987349
HG01358_chrY	CAT	exon	24188612	24188694	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG01358_ch_T0000641;gene_id=HG01358_ch_G0000229;Parent=HG01358_ch_T0000641;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG01358_ch_T0000641:0;Name=LOC107987349;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24188695	24188811	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG01358_ch_T0000641;gene_id=HG01358_ch_G0000229;Parent=HG01358_ch_T0000641;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG01358_ch_T0000641:0;Name=LOC107987349;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24188812	24188872	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG01358_ch_T0000641;gene_id=HG01358_ch_G0000229;Parent=HG01358_ch_T0000641;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG01358_ch_T0000641:1;Name=LOC107987349;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24188873	24190407	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG01358_ch_T0000641;gene_id=HG01358_ch_G0000229;Parent=HG01358_ch_T0000641;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG01358_ch_T0000641:1;Name=LOC107987349;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24190408	24191736	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG01358_ch_T0000641;gene_id=HG01358_ch_G0000229;Parent=HG01358_ch_T0000641;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG01358_ch_T0000641:2;Name=LOC107987349;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24487666	24492564	.	-	.	source_gene_common_name=TTTY3;source_gene=hg002_chrY_paternal_572;alternative_source_transcripts=hg002_chrY_paternal_572.1;gene_id=HG01358_ch_G0000230;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG01358_ch_G0000230;Name=TTTY3
HG01358_chrY	CAT	transcript	24487666	24492564	1000	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG01358_ch_T0000642;gene_id=HG01358_ch_G0000230;Parent=HG01358_ch_G0000230;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=HG01358_ch_T0000642;Name=TTTY3
HG01358_chrY	CAT	exon	24487666	24487770	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG01358_ch_T0000642;gene_id=HG01358_ch_G0000230;Parent=HG01358_ch_T0000642;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG01358_ch_T0000642:0;Name=TTTY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24487771	24490127	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG01358_ch_T0000642;gene_id=HG01358_ch_G0000230;Parent=HG01358_ch_T0000642;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG01358_ch_T0000642:0;Name=TTTY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24490128	24490262	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG01358_ch_T0000642;gene_id=HG01358_ch_G0000230;Parent=HG01358_ch_T0000642;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG01358_ch_T0000642:1;Name=TTTY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24490263	24492460	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG01358_ch_T0000642;gene_id=HG01358_ch_G0000230;Parent=HG01358_ch_T0000642;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG01358_ch_T0000642:1;Name=TTTY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24492461	24492564	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG01358_ch_T0000642;gene_id=HG01358_ch_G0000230;Parent=HG01358_ch_T0000642;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG01358_ch_T0000642:2;Name=TTTY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24595563	24598959	.	-	.	source_gene_common_name=CDY1;source_gene=hg002_chrY_paternal_638;alternative_source_transcripts=hg002_chrY_paternal_565.3;gene_id=HG01358_ch_G0000231;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=HG01358_ch_G0000231;Name=CDY1
HG01358_chrY	CAT	transcript	24595563	24598957	1000	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG01358_ch_T0000643;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_G0000231;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=HG01358_ch_T0000643;Name=CDY1
HG01358_chrY	CAT	exon	24595563	24595644	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG01358_ch_T0000643;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000643;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG01358_ch_T0000643:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24595645	24596419	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG01358_ch_T0000643;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000643;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG01358_ch_T0000643:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24596420	24596619	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG01358_ch_T0000643;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000643;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG01358_ch_T0000643:1;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24596620	24597039	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG01358_ch_T0000643;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000643;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG01358_ch_T0000643:1;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24597040	24598957	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG01358_ch_T0000643;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000643;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG01358_ch_T0000643:2;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	24596172	24598957	100	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG01358_ch_T0000644;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_G0000231;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG01358_ch_T0000644;Name=CDY1
HG01358_chrY	CAT	exon	24596172	24596619	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG01358_ch_T0000644;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000644;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG01358_ch_T0000644:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	24596547	24596619	.	-	1	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG01358_ch_T0000644;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000644;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG01358_ch_T0000644:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	24596547	24596549	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG01358_ch_T0000644;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000644;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG01358_ch_T0000644;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24596620	24597039	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG01358_ch_T0000644;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000644;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG01358_ch_T0000644:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24597040	24598957	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG01358_ch_T0000644;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000644;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG01358_ch_T0000644:1;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	24597040	24598631	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG01358_ch_T0000644;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000644;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG01358_ch_T0000644:1;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	24598629	24598631	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG01358_ch_T0000644;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000644;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG01358_ch_T0000644;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	24596172	24598959	100	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000645;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_G0000231;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG01358_ch_T0000645;Name=CDY1
HG01358_chrY	CAT	exon	24596172	24596619	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000645;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000645;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG01358_ch_T0000645:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	24596599	24596619	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000645;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000645;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG01358_ch_T0000645:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	24596599	24596601	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000645;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000645;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG01358_ch_T0000645;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24596620	24597239	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000645;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000645;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG01358_ch_T0000645:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24597240	24598959	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000645;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000645;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG01358_ch_T0000645:1;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	24597240	24598631	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000645;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000645;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG01358_ch_T0000645:1;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	24598629	24598631	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000645;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000645;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG01358_ch_T0000645;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	24596736	24598957	100	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000646;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_G0000231;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG01358_ch_T0000646;Name=CDY1
HG01358_chrY	CAT	exon	24596736	24598957	.	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000646;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000646;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG01358_ch_T0000646:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	24597009	24598631	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000646;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000646;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG01358_ch_T0000646:0;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	24597009	24597011	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000646;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000646;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG01358_ch_T0000646;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	24598629	24598631	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG01358_ch_T0000646;gene_id=HG01358_ch_G0000231;Parent=HG01358_ch_T0000646;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG01358_ch_T0000646;Name=CDY1;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24734375	24738172	.	-	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG01358_ch_G0000232;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=transMap_pairwise;ID=HG01358_ch_G0000232;Name=CSPG4P1Y
HG01358_chrY	CAT	transcript	24734375	24738172	1000	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01358_ch_T0000647;gene_id=HG01358_ch_G0000232;Parent=HG01358_ch_G0000232;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG01358_ch_T0000647;Name=CSPG4P1Y
HG01358_chrY	CAT	exon	24734375	24734446	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01358_ch_T0000647;gene_id=HG01358_ch_G0000232;Parent=HG01358_ch_T0000647;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG01358_ch_T0000647:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24734447	24737449	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01358_ch_T0000647;gene_id=HG01358_ch_G0000232;Parent=HG01358_ch_T0000647;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG01358_ch_T0000647:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24737450	24738172	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01358_ch_T0000647;gene_id=HG01358_ch_G0000232;Parent=HG01358_ch_T0000647;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG01358_ch_T0000647:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24757379	24758909	.	+	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_626;alternative_source_transcripts=hg002_chrY_paternal_552.1;gene_id=HG01358_ch_G0000233;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG01358_ch_G0000233;Name=LOC102724034
HG01358_chrY	CAT	transcript	24757379	24758909	1000	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG01358_ch_T0000648;gene_id=HG01358_ch_G0000233;Parent=HG01358_ch_G0000233;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=HG01358_ch_T0000648;Name=LOC102724034
HG01358_chrY	CAT	exon	24757379	24757404	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG01358_ch_T0000648;gene_id=HG01358_ch_G0000233;Parent=HG01358_ch_T0000648;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG01358_ch_T0000648:0;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24757405	24758092	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG01358_ch_T0000648;gene_id=HG01358_ch_G0000233;Parent=HG01358_ch_T0000648;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG01358_ch_T0000648:0;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24758093	24758217	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG01358_ch_T0000648;gene_id=HG01358_ch_G0000233;Parent=HG01358_ch_T0000648;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG01358_ch_T0000648:1;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24758218	24758485	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG01358_ch_T0000648;gene_id=HG01358_ch_G0000233;Parent=HG01358_ch_T0000648;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG01358_ch_T0000648:1;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24758486	24758909	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG01358_ch_T0000648;gene_id=HG01358_ch_G0000233;Parent=HG01358_ch_T0000648;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG01358_ch_T0000648:2;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24760908	24765772	.	-	.	source_gene_common_name=GOLGA2P3Y;source_gene=hg002_chrY_paternal_624;alternative_source_transcripts=hg002_chrY_paternal_550.1;gene_id=HG01358_ch_G0000234;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=HG01358_ch_G0000234;Name=GOLGA2P3Y
HG01358_chrY	CAT	transcript	24760908	24765772	1000	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_G0000234;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=HG01358_ch_T0000649;Name=GOLGA2P3Y
HG01358_chrY	CAT	exon	24760908	24760991	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24760992	24761073	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01358_ch_T0000649:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24761074	24761166	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24761167	24761255	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01358_ch_T0000649:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24761256	24761444	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24761445	24761699	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01358_ch_T0000649:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24761700	24761788	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24761789	24762208	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01358_ch_T0000649:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24762209	24762283	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24762284	24763639	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01358_ch_T0000649:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24763640	24763697	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24763698	24763993	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01358_ch_T0000649:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24763994	24764345	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24764346	24765464	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01358_ch_T0000649:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24765465	24765543	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24765544	24765729	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01358_ch_T0000649:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24765730	24765772	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG01358_ch_T0000649;gene_id=HG01358_ch_G0000234;Parent=HG01358_ch_T0000649;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01358_ch_T0000649:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24826363	24842782	.	+	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;gene_id=HG01358_ch_G0000235;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=HG01358_ch_G0000235;Name=SEPTIN14P23
HG01358_chrY	CAT	transcript	24826363	24842782	1000	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000650;gene_id=HG01358_ch_G0000235;Parent=HG01358_ch_G0000235;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG01358_ch_T0000650;Name=SEPTIN14P23
HG01358_chrY	CAT	exon	24826363	24826456	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000650;gene_id=HG01358_ch_G0000235;Parent=HG01358_ch_T0000650;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01358_ch_T0000650:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24826457	24833996	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000650;gene_id=HG01358_ch_G0000235;Parent=HG01358_ch_T0000650;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG01358_ch_T0000650:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24833997	24834165	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000650;gene_id=HG01358_ch_G0000235;Parent=HG01358_ch_T0000650;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01358_ch_T0000650:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24834166	24842203	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000650;gene_id=HG01358_ch_G0000235;Parent=HG01358_ch_T0000650;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG01358_ch_T0000650:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24842204	24842782	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000650;gene_id=HG01358_ch_G0000235;Parent=HG01358_ch_T0000650;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01358_ch_T0000650:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24861648	24872636	.	-	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_542;alternative_source_transcripts=hg002_chrY_paternal_542.1;gene_id=HG01358_ch_G0000236;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG01358_ch_G0000236;Name=LOC107987240
HG01358_chrY	CAT	transcript	24861648	24872636	1000	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG01358_ch_T0000651;gene_id=HG01358_ch_G0000236;Parent=HG01358_ch_G0000236;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=HG01358_ch_T0000651;Name=LOC107987240
HG01358_chrY	CAT	exon	24861648	24862305	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG01358_ch_T0000651;gene_id=HG01358_ch_G0000236;Parent=HG01358_ch_T0000651;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG01358_ch_T0000651:0;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24862306	24862514	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG01358_ch_T0000651;gene_id=HG01358_ch_G0000236;Parent=HG01358_ch_T0000651;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG01358_ch_T0000651:0;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24862515	24862621	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG01358_ch_T0000651;gene_id=HG01358_ch_G0000236;Parent=HG01358_ch_T0000651;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG01358_ch_T0000651:1;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24862622	24872404	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG01358_ch_T0000651;gene_id=HG01358_ch_G0000236;Parent=HG01358_ch_T0000651;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG01358_ch_T0000651:1;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24872405	24872636	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG01358_ch_T0000651;gene_id=HG01358_ch_G0000236;Parent=HG01358_ch_T0000651;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG01358_ch_T0000651:2;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24880517	24882150	.	+	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_615;alternative_source_transcripts=hg002_chrY_paternal_541.1;gene_id=HG01358_ch_G0000237;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG01358_ch_G0000237;Name=LOC101928626
HG01358_chrY	CAT	transcript	24880517	24882150	1000	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG01358_ch_T0000652;gene_id=HG01358_ch_G0000237;Parent=HG01358_ch_G0000237;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=HG01358_ch_T0000652;Name=LOC101928626
HG01358_chrY	CAT	exon	24880517	24880607	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG01358_ch_T0000652;gene_id=HG01358_ch_G0000237;Parent=HG01358_ch_T0000652;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG01358_ch_T0000652:0;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24880608	24881302	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG01358_ch_T0000652;gene_id=HG01358_ch_G0000237;Parent=HG01358_ch_T0000652;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG01358_ch_T0000652:0;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24881303	24881569	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG01358_ch_T0000652;gene_id=HG01358_ch_G0000237;Parent=HG01358_ch_T0000652;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG01358_ch_T0000652:1;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24881570	24881706	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG01358_ch_T0000652;gene_id=HG01358_ch_G0000237;Parent=HG01358_ch_T0000652;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG01358_ch_T0000652:1;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24881707	24882150	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG01358_ch_T0000652;gene_id=HG01358_ch_G0000237;Parent=HG01358_ch_T0000652;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG01358_ch_T0000652:2;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	24970917	24984022	.	+	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_612;alternative_source_transcripts=hg002_chrY_paternal_538.1;gene_id=HG01358_ch_G0000238;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG01358_ch_G0000238;Name=LOC107987350
HG01358_chrY	CAT	transcript	24970917	24984022	1000	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG01358_ch_T0000653;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_G0000238;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG01358_ch_T0000653;Name=LOC107987350
HG01358_chrY	CAT	exon	24970917	24971372	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG01358_ch_T0000653;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000653;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000653:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24971373	24977342	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG01358_ch_T0000653;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000653;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG01358_ch_T0000653:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24977343	24979507	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG01358_ch_T0000653;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000653;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000653:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24979508	24980148	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG01358_ch_T0000653;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000653;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG01358_ch_T0000653:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24980149	24984022	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG01358_ch_T0000653;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000653;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000653:2;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	24970917	24984022	1000	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG01358_ch_T0000654;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_G0000238;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG01358_ch_T0000654;Name=LOC107987350
HG01358_chrY	CAT	exon	24970917	24971372	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG01358_ch_T0000654;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000654;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000654:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24971373	24976874	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG01358_ch_T0000654;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000654;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG01358_ch_T0000654:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24976875	24979507	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG01358_ch_T0000654;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000654;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000654:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	24979508	24980148	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG01358_ch_T0000654;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000654;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG01358_ch_T0000654:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	24980149	24984022	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG01358_ch_T0000654;gene_id=HG01358_ch_G0000238;Parent=HG01358_ch_T0000654;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000654:2;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25036293	25037423	.	+	.	source_gene_common_name=TTTY17B;source_gene=hg002_chrY_paternal_611;alternative_source_transcripts=hg002_chrY_paternal_537.1;gene_id=HG01358_ch_G0000239;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG01358_ch_G0000239;Name=TTTY17B
HG01358_chrY	CAT	transcript	25036293	25037423	1000	+	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG01358_ch_T0000655;gene_id=HG01358_ch_G0000239;Parent=HG01358_ch_G0000239;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=HG01358_ch_T0000655;Name=TTTY17B
HG01358_chrY	CAT	exon	25036293	25036352	.	+	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG01358_ch_T0000655;gene_id=HG01358_ch_G0000239;Parent=HG01358_ch_T0000655;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG01358_ch_T0000655:0;Name=TTTY17B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25036353	25037317	.	+	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG01358_ch_T0000655;gene_id=HG01358_ch_G0000239;Parent=HG01358_ch_T0000655;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=intron:HG01358_ch_T0000655:0;Name=TTTY17B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25037318	25037423	.	+	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG01358_ch_T0000655;gene_id=HG01358_ch_G0000239;Parent=HG01358_ch_T0000655;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG01358_ch_T0000655:1;Name=TTTY17B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25121174	25157991	.	+	.	source_gene_common_name=TTTY4B;source_gene=hg002_chrY_paternal_608;alternative_source_transcripts=hg002_chrY_paternal_534.1;gene_id=HG01358_ch_G0000240;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG01358_ch_G0000240;Name=TTTY4B
HG01358_chrY	CAT	transcript	25121174	25157991	1000	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG01358_ch_T0000656;gene_id=HG01358_ch_G0000240;Parent=HG01358_ch_G0000240;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=HG01358_ch_T0000656;Name=TTTY4B
HG01358_chrY	CAT	exon	25121174	25121334	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG01358_ch_T0000656;gene_id=HG01358_ch_G0000240;Parent=HG01358_ch_T0000656;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG01358_ch_T0000656:0;Name=TTTY4B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25121335	25148352	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG01358_ch_T0000656;gene_id=HG01358_ch_G0000240;Parent=HG01358_ch_T0000656;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG01358_ch_T0000656:0;Name=TTTY4B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25148353	25148428	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG01358_ch_T0000656;gene_id=HG01358_ch_G0000240;Parent=HG01358_ch_T0000656;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG01358_ch_T0000656:1;Name=TTTY4B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25148429	25150232	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG01358_ch_T0000656;gene_id=HG01358_ch_G0000240;Parent=HG01358_ch_T0000656;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG01358_ch_T0000656:1;Name=TTTY4B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25150233	25150340	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG01358_ch_T0000656;gene_id=HG01358_ch_G0000240;Parent=HG01358_ch_T0000656;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG01358_ch_T0000656:2;Name=TTTY4B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25150341	25156990	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG01358_ch_T0000656;gene_id=HG01358_ch_G0000240;Parent=HG01358_ch_T0000656;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG01358_ch_T0000656:2;Name=TTTY4B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25156991	25157991	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG01358_ch_T0000656;gene_id=HG01358_ch_G0000240;Parent=HG01358_ch_T0000656;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG01358_ch_T0000656:3;Name=TTTY4B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25168970	25190173	.	+	.	source_gene_common_name=BPY2;source_gene=hg002_chrY_paternal_607;alternative_source_transcripts=hg002_chrY_paternal_533.1;gene_id=HG01358_ch_G0000241;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG01358_ch_G0000241;Name=BPY2
HG01358_chrY	CAT	transcript	25168970	25190173	100	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_G0000241;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=HG01358_ch_T0000657;Name=BPY2
HG01358_chrY	CAT	exon	25168970	25169000	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:0;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25169001	25169275	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01358_ch_T0000657:0;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25169276	25169398	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:1;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25169399	25172463	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01358_ch_T0000657:1;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25172464	25172600	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:2;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25172601	25177009	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01358_ch_T0000657:2;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25177010	25177128	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:3;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25177051	25177128	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG01358_ch_T0000657:0;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25177051	25177053	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=start_codon:HG01358_ch_T0000657;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25177129	25179187	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01358_ch_T0000657:3;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25179188	25179305	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:4;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25179188	25179305	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG01358_ch_T0000657:1;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25179306	25182159	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01358_ch_T0000657:4;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25182160	25182265	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:5;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25182160	25182265	.	+	2	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG01358_ch_T0000657:2;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25182266	25182957	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01358_ch_T0000657:5;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25182958	25183082	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:6;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25182958	25182976	.	+	1	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG01358_ch_T0000657:3;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25182974	25182976	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=stop_codon:HG01358_ch_T0000657;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25183083	25189632	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01358_ch_T0000657:6;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25189633	25189757	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:7;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25189758	25189851	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01358_ch_T0000657:7;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25189852	25190173	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG01358_ch_T0000657;gene_id=HG01358_ch_G0000241;Parent=HG01358_ch_T0000657;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01358_ch_T0000657:8;Name=BPY2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25291074	25294415	.	-	.	source_gene_common_name=LOC105377238;source_gene=hg002_chrY_paternal_599;gene_id=HG01358_ch_G0000242;gene_biotype=lncRNA;gene_name=LOC105377238;gene_sources=liftoff;ID=HG01358_ch_G0000242;Name=LOC105377238
HG01358_chrY	CAT	transcript	25291074	25294415	1000	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000658;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_G0000242;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG01358_ch_T0000658;Name=LOC105377238
HG01358_chrY	CAT	exon	25291074	25291174	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000658;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01358_ch_T0000658:0;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25291175	25293532	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000658;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG01358_ch_T0000658:0;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25293533	25293570	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000658;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01358_ch_T0000658:1;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25293571	25294232	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000658;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG01358_ch_T0000658:1;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25294233	25294415	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000658;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000658;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01358_ch_T0000658:2;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	25291074	25294415	1000	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000659;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_G0000242;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG01358_ch_T0000659;Name=LOC105377238
HG01358_chrY	CAT	exon	25291074	25291174	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000659;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01358_ch_T0000659:0;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25291175	25293505	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000659;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG01358_ch_T0000659:0;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25293506	25293570	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000659;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01358_ch_T0000659:1;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25293571	25294232	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000659;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG01358_ch_T0000659:1;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25294233	25294415	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG01358_ch_T0000659;gene_id=HG01358_ch_G0000242;Parent=HG01358_ch_T0000659;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01358_ch_T0000659:2;Name=LOC105377238;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25314029	25389522	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;gene_id=HG01358_ch_G0000243;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=HG01358_ch_G0000243;Name=DAZ3
HG01358_chrY	CAT	transcript	25314029	25389522	100	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_G0000243;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG01358_ch_T0000660;Name=DAZ3
HG01358_chrY	CAT	exon	25314029	25315885	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:0;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25315886	25319858	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:0;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25319859	25319957	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:1;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25319894	25319957	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:0;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25319894	25319896	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG01358_ch_T0000660;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25319958	25324529	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:1;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25324530	25324564	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:2;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25324530	25324564	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:1;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25324565	25325309	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:2;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25325310	25325381	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:3;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25325310	25325381	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:2;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25325382	25349393	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:3;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25349394	25349465	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:4;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25349394	25349465	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:3;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25349466	25351770	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:4;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25351771	25351842	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:5;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25351771	25351842	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:4;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25351843	25354150	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:5;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25354151	25354222	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:6;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25354151	25354222	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:5;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25354223	25356527	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:6;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25356528	25356599	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:7;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25356528	25356599	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:6;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25356600	25358923	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:7;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25358924	25358995	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:8;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25358924	25358995	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:7;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25358996	25361307	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:8;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25361308	25361379	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:9;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25361308	25361379	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:8;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25361380	25363703	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:9;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25363704	25363775	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:10;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25363704	25363775	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:9;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25363776	25366093	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:10;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25366094	25366165	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:11;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25366094	25366165	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:10;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25366166	25368536	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:11;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25368537	25368608	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:12;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25368537	25368608	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:11;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25368609	25380856	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:12;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25380857	25380996	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:13;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25380857	25380996	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:12;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25380997	25381085	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:13;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25381086	25381149	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:14;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25381086	25381149	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:13;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25381150	25381585	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:14;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25381586	25381637	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:15;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25381586	25381637	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:14;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25381638	25382197	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:15;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25382198	25382289	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:16;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25382198	25382289	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:15;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25382290	25382563	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:16;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25382564	25382710	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:17;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25382564	25382710	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:16;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25382711	25389311	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01358_ch_T0000660:17;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25389312	25389522	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01358_ch_T0000660:18;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25389312	25389314	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01358_ch_T0000660:17;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25389312	25389314	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG01358_ch_T0000660;gene_id=HG01358_ch_G0000243;Parent=HG01358_ch_T0000660;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG01358_ch_T0000660;Name=DAZ3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25409972	25469910	.	+	.	source_gene_common_name=DAZ2;source_gene=hg002_chrY_paternal_601;gene_id=HG01358_ch_G0000244;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=transMap_pairwise;ID=HG01358_ch_G0000244;Name=DAZ2
HG01358_chrY	CAT	transcript	25409972	25469910	10000	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_G0000244;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000661;Name=DAZ2
HG01358_chrY	CAT	exon	25409972	25410258	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000661;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25410259	25416859	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25416860	25417006	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25416860	25417006	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417007	25417280	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417281	25417372	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417281	25417372	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417373	25417932	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417933	25417984	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417933	25417984	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417985	25418420	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418421	25418484	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418421	25418484	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418485	25418573	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418574	25418713	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418574	25418713	.	+	2	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418714	25420113	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25420114	25420185	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25420114	25420185	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25420186	25422556	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25422557	25422628	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25422557	25422628	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25422629	25424946	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25424947	25425018	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25424947	25425018	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25425019	25432099	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25432100	25432171	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25432100	25432171	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25432172	25434483	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25434484	25434555	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25434484	25434555	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25434556	25458557	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25458558	25458629	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25458558	25458629	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25458630	25459374	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25459375	25459409	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25459375	25459409	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25459410	25463981	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25463982	25464080	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25463982	25464045	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000661:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25464043	25464045	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000661;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25464081	25468053	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000661:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25468054	25469910	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000661;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000661;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000661:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	25409972	25469910	10000	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_G0000244;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000662;Name=DAZ2
HG01358_chrY	CAT	exon	25409972	25410258	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000662;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25410259	25416859	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25416860	25417006	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25416860	25417006	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417007	25417280	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417281	25417372	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417281	25417372	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417373	25417932	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417933	25417984	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417933	25417984	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417985	25418420	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418421	25418484	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418421	25418484	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418485	25418573	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418574	25418713	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418574	25418713	.	+	2	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418714	25420113	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25420114	25420185	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25420114	25420185	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25420186	25422556	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25422557	25422628	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25422557	25422628	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25422629	25434483	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25434484	25434555	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25434484	25434555	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25434556	25458557	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25458558	25458629	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25458558	25458629	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25458630	25459374	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25459375	25459409	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25459375	25459409	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25459410	25463981	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25463982	25464080	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25463982	25464045	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000662:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25464043	25464045	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000662;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25464081	25468053	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000662:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25468054	25469910	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000662;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000662;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000662:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	25409972	25469910	10000	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_G0000244;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000663;Name=DAZ2
HG01358_chrY	CAT	exon	25409972	25410258	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000663;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25410259	25416859	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25416860	25417006	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25416860	25417006	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417007	25417280	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417281	25417372	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417281	25417372	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417373	25417932	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417933	25417984	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417933	25417984	.	+	1	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417985	25418420	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418421	25418484	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418421	25418484	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418485	25418573	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418574	25418713	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418574	25418713	.	+	2	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418714	25420113	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25420114	25420185	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25420114	25420185	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25420186	25422556	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25422557	25422628	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25422557	25422628	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25422629	25424946	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25424947	25425018	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25424947	25425018	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25425019	25432099	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25432100	25432171	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25432100	25432171	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25432172	25434483	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25434484	25434555	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25434484	25434555	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25434556	25448770	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25448771	25448842	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25448771	25448842	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25448843	25458557	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25458558	25458629	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25458558	25458629	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25458630	25459374	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25459375	25459409	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25459375	25459409	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25459410	25463981	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25463982	25464080	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25463982	25464045	.	+	1	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000663:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25464043	25464045	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000663;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25464081	25468053	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000663:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25468054	25469910	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000663;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000663;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000663:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	25410048	25469910	10000	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_G0000244;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000664;Name=DAZ2
HG01358_chrY	CAT	exon	25410048	25410258	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000664;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25410259	25417280	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417281	25417372	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417281	25417372	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417373	25417932	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417933	25417984	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417933	25417984	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417985	25418420	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418421	25418484	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418421	25418484	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418485	25418573	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418574	25418713	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418574	25418713	.	+	2	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418714	25420113	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25420114	25420185	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25420114	25420185	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25420186	25422556	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25422557	25422628	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25422557	25422628	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25422629	25424946	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25424947	25425018	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25424947	25425018	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25425019	25432099	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25432100	25432171	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25432100	25432171	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25432172	25434483	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25434484	25434555	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25434484	25434555	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25434556	25446393	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25446394	25446465	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25446394	25446465	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25446466	25448770	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25448771	25448842	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25448771	25448842	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25448843	25458557	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25458558	25458629	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25458558	25458629	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25458630	25459374	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25459375	25459409	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25459375	25459409	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25459410	25463981	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25463982	25464080	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25463982	25464045	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000664:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25464043	25464045	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000664;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25464081	25468053	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000664:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25468054	25469910	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000664;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000664;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000664:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	25410048	25469910	10000	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_G0000244;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000665;Name=DAZ2
HG01358_chrY	CAT	exon	25410048	25410258	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000665;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25410259	25416859	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25416860	25417006	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25416860	25417006	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417007	25417280	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417281	25417372	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417281	25417372	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417373	25417932	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417933	25417984	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417933	25417984	.	+	1	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417985	25418420	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418421	25418484	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418421	25418484	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418485	25418573	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418574	25418713	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418574	25418713	.	+	2	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418714	25420113	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25420114	25420185	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25420114	25420185	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25420186	25422556	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25422557	25422628	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25422557	25422628	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25422629	25424946	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25424947	25425018	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25424947	25425018	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25425019	25432099	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25432100	25432171	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25432100	25432171	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25432172	25434483	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25434484	25434555	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25434484	25434555	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25434556	25446393	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25446394	25446465	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25446394	25446465	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25446466	25448770	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25448771	25448842	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25448771	25448842	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25448843	25458557	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25458558	25458629	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25458558	25458629	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25458630	25459374	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25459375	25459409	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25459375	25459409	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25459410	25463981	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25463982	25464080	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25463982	25464045	.	+	1	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000665:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25464043	25464045	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000665;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25464081	25468053	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000665:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25468054	25469910	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5;transcript_id=HG01358_ch_T0000665;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000665;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000665:16;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	25410048	25469910	10000	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_G0000244;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01358_ch_T0000666;Name=DAZ2
HG01358_chrY	CAT	exon	25410048	25410258	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25410256	25410258	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01358_ch_T0000666;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25410259	25416859	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:0;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25416860	25417006	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25416860	25417006	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417007	25417280	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:1;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417281	25417372	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417281	25417372	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417373	25417932	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:2;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25417933	25417984	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25417933	25417984	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25417985	25418420	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:3;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418421	25418484	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418421	25418484	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418485	25418573	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:4;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25418574	25418713	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25418574	25418713	.	+	2	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25418714	25420113	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:5;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25420114	25420185	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25420114	25420185	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25420186	25422556	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:6;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25422557	25422628	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25422557	25422628	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25422629	25424946	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:7;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25424947	25425018	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25424947	25425018	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25425019	25432099	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:8;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25432100	25432171	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25432100	25432171	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25432172	25434483	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:9;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25434484	25434555	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25434484	25434555	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25434556	25448770	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:10;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25448771	25448842	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25448771	25448842	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25448843	25458557	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:11;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25458558	25458629	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25458558	25458629	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25458630	25459374	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:12;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25459375	25459409	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25459375	25459409	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25459410	25463981	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:13;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25463982	25464080	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25463982	25464045	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01358_ch_T0000666:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25464043	25464045	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01358_ch_T0000666;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25464081	25468053	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01358_ch_T0000666:14;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25468054	25469910	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG01358_ch_T0000666;gene_id=HG01358_ch_G0000244;Parent=HG01358_ch_T0000666;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01358_ch_T0000666:15;Name=DAZ2;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25489520	25492861	.	+	.	source_gene_common_name=LOC105377241;source_gene=hg002_chrY_paternal_525;gene_id=HG01358_ch_G0000245;gene_biotype=lncRNA;gene_name=LOC105377241;gene_sources=liftoff;ID=HG01358_ch_G0000245;Name=LOC105377241
HG01358_chrY	CAT	transcript	25489520	25492861	1000	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000667;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_G0000245;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG01358_ch_T0000667;Name=LOC105377241
HG01358_chrY	CAT	exon	25489520	25489702	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000667;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000667;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01358_ch_T0000667:0;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25489703	25490364	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000667;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000667;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG01358_ch_T0000667:0;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25490365	25490402	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000667;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000667;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01358_ch_T0000667:1;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25490403	25492760	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000667;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000667;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG01358_ch_T0000667:1;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25492761	25492861	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000667;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000667;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01358_ch_T0000667:2;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	25489520	25492861	1000	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000668;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_G0000245;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG01358_ch_T0000668;Name=LOC105377241
HG01358_chrY	CAT	exon	25489520	25489702	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000668;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000668;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01358_ch_T0000668:0;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25489703	25490364	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000668;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000668;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG01358_ch_T0000668:0;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25490365	25490429	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000668;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000668;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01358_ch_T0000668:1;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25490430	25492760	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000668;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000668;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG01358_ch_T0000668:1;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25492761	25492861	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG01358_ch_T0000668;gene_id=HG01358_ch_G0000245;Parent=HG01358_ch_T0000668;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01358_ch_T0000668:2;Name=LOC105377241;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25593768	25614970	.	-	.	source_gene_common_name=BPY2C;source_gene=hg002_chrY_paternal_520;alternative_source_transcripts=hg002_chrY_paternal_607.1;gene_id=HG01358_ch_G0000246;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=HG01358_ch_G0000246;Name=BPY2C
HG01358_chrY	CAT	transcript	25593768	25614970	100	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_G0000246;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=HG01358_ch_T0000669;Name=BPY2C
HG01358_chrY	CAT	exon	25593768	25594089	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:0;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25594090	25594183	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01358_ch_T0000669:0;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25594184	25594308	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:1;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25594309	25600858	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01358_ch_T0000669:1;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25600859	25600983	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:2;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25600965	25600983	.	-	1	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG01358_ch_T0000669:0;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	25600965	25600967	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=stop_codon:HG01358_ch_T0000669;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25600984	25601675	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01358_ch_T0000669:2;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25601676	25601781	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:3;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25601676	25601781	.	-	2	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG01358_ch_T0000669:1;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25601782	25604634	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01358_ch_T0000669:3;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25604635	25604752	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:4;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25604635	25604752	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG01358_ch_T0000669:2;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25604753	25606811	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01358_ch_T0000669:4;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25606812	25606930	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:5;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	25606812	25606889	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG01358_ch_T0000669:3;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	25606887	25606889	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=start_codon:HG01358_ch_T0000669;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25606931	25611339	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01358_ch_T0000669:5;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25611340	25611476	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:6;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25611477	25614541	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01358_ch_T0000669:6;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25614542	25614664	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:7;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25614665	25614939	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01358_ch_T0000669:7;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25614940	25614970	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_607.1;transcript_id=HG01358_ch_T0000669;gene_id=HG01358_ch_G0000246;Parent=HG01358_ch_T0000669;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01358_ch_T0000669:8;Name=BPY2C;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25625949	25662776	.	-	.	source_gene_common_name=TTTY4;source_gene=hg002_chrY_paternal_534;gene_id=HG01358_ch_G0000247;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG01358_ch_G0000247;Name=TTTY4
HG01358_chrY	CAT	transcript	25625949	25662776	1000	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG01358_ch_T0000670;gene_id=HG01358_ch_G0000247;Parent=HG01358_ch_G0000247;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=HG01358_ch_T0000670;Name=TTTY4
HG01358_chrY	CAT	exon	25625949	25626949	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG01358_ch_T0000670;gene_id=HG01358_ch_G0000247;Parent=HG01358_ch_T0000670;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG01358_ch_T0000670:0;Name=TTTY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25626950	25633617	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG01358_ch_T0000670;gene_id=HG01358_ch_G0000247;Parent=HG01358_ch_T0000670;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG01358_ch_T0000670:0;Name=TTTY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25633618	25633725	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG01358_ch_T0000670;gene_id=HG01358_ch_G0000247;Parent=HG01358_ch_T0000670;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG01358_ch_T0000670:1;Name=TTTY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25633726	25635529	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG01358_ch_T0000670;gene_id=HG01358_ch_G0000247;Parent=HG01358_ch_T0000670;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG01358_ch_T0000670:1;Name=TTTY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25635530	25635605	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG01358_ch_T0000670;gene_id=HG01358_ch_G0000247;Parent=HG01358_ch_T0000670;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG01358_ch_T0000670:2;Name=TTTY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25635606	25662615	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG01358_ch_T0000670;gene_id=HG01358_ch_G0000247;Parent=HG01358_ch_T0000670;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG01358_ch_T0000670:2;Name=TTTY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25662616	25662776	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG01358_ch_T0000670;gene_id=HG01358_ch_G0000247;Parent=HG01358_ch_T0000670;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG01358_ch_T0000670:3;Name=TTTY4;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25746519	25747650	.	-	.	source_gene_common_name=TTTY17C;source_gene=hg002_chrY_paternal_537;gene_id=HG01358_ch_G0000248;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG01358_ch_G0000248;Name=TTTY17C
HG01358_chrY	CAT	transcript	25746519	25747650	1000	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG01358_ch_T0000671;gene_id=HG01358_ch_G0000248;Parent=HG01358_ch_G0000248;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=HG01358_ch_T0000671;Name=TTTY17C
HG01358_chrY	CAT	exon	25746519	25746624	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG01358_ch_T0000671;gene_id=HG01358_ch_G0000248;Parent=HG01358_ch_T0000671;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG01358_ch_T0000671:0;Name=TTTY17C;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25746625	25747590	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG01358_ch_T0000671;gene_id=HG01358_ch_G0000248;Parent=HG01358_ch_T0000671;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=intron:HG01358_ch_T0000671:0;Name=TTTY17C;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25747591	25747650	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG01358_ch_T0000671;gene_id=HG01358_ch_G0000248;Parent=HG01358_ch_T0000671;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG01358_ch_T0000671:1;Name=TTTY17C;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25799914	25813019	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_538;alternative_source_transcripts=hg002_chrY_paternal_612.1;gene_id=HG01358_ch_G0000249;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG01358_ch_G0000249;Name=LOC107987350
HG01358_chrY	CAT	transcript	25799914	25813019	1000	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG01358_ch_T0000672;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_G0000249;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG01358_ch_T0000672;Name=LOC107987350
HG01358_chrY	CAT	exon	25799914	25803787	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG01358_ch_T0000672;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000672;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000672:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25803788	25804428	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG01358_ch_T0000672;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000672;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG01358_ch_T0000672:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25804429	25806593	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG01358_ch_T0000672;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000672;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000672:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25806594	25812563	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG01358_ch_T0000672;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000672;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG01358_ch_T0000672:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25812564	25813019	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG01358_ch_T0000672;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000672;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000672:2;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	25799914	25813019	1000	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG01358_ch_T0000673;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_G0000249;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG01358_ch_T0000673;Name=LOC107987350
HG01358_chrY	CAT	exon	25799914	25803787	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG01358_ch_T0000673;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000673;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000673:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25803788	25804428	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG01358_ch_T0000673;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000673;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG01358_ch_T0000673:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25804429	25807061	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG01358_ch_T0000673;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000673;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000673:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25807062	25812563	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG01358_ch_T0000673;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000673;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG01358_ch_T0000673:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25812564	25813019	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG01358_ch_T0000673;gene_id=HG01358_ch_G0000249;Parent=HG01358_ch_T0000673;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01358_ch_T0000673:2;Name=LOC107987350;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25901762	25903395	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_541;alternative_source_transcripts=hg002_chrY_paternal_615.1;gene_id=HG01358_ch_G0000250;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG01358_ch_G0000250;Name=LOC101928626
HG01358_chrY	CAT	transcript	25901762	25903395	1000	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG01358_ch_T0000674;gene_id=HG01358_ch_G0000250;Parent=HG01358_ch_G0000250;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=HG01358_ch_T0000674;Name=LOC101928626
HG01358_chrY	CAT	exon	25901762	25902205	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG01358_ch_T0000674;gene_id=HG01358_ch_G0000250;Parent=HG01358_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG01358_ch_T0000674:0;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25902206	25902342	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG01358_ch_T0000674;gene_id=HG01358_ch_G0000250;Parent=HG01358_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG01358_ch_T0000674:0;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25902343	25902609	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG01358_ch_T0000674;gene_id=HG01358_ch_G0000250;Parent=HG01358_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG01358_ch_T0000674:1;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25902610	25903304	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG01358_ch_T0000674;gene_id=HG01358_ch_G0000250;Parent=HG01358_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG01358_ch_T0000674:1;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25903305	25903395	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG01358_ch_T0000674;gene_id=HG01358_ch_G0000250;Parent=HG01358_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG01358_ch_T0000674:2;Name=LOC101928626;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25911276	25922275	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_616;alternative_source_transcripts=hg002_chrY_paternal_616.1;gene_id=HG01358_ch_G0000251;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG01358_ch_G0000251;Name=LOC107987240
HG01358_chrY	CAT	transcript	25911276	25922275	1000	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG01358_ch_T0000675;gene_id=HG01358_ch_G0000251;Parent=HG01358_ch_G0000251;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=HG01358_ch_T0000675;Name=LOC107987240
HG01358_chrY	CAT	exon	25911276	25911507	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG01358_ch_T0000675;gene_id=HG01358_ch_G0000251;Parent=HG01358_ch_T0000675;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG01358_ch_T0000675:0;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25911508	25921301	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG01358_ch_T0000675;gene_id=HG01358_ch_G0000251;Parent=HG01358_ch_T0000675;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG01358_ch_T0000675:0;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25921302	25921408	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG01358_ch_T0000675;gene_id=HG01358_ch_G0000251;Parent=HG01358_ch_T0000675;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG01358_ch_T0000675:1;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25921409	25921617	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG01358_ch_T0000675;gene_id=HG01358_ch_G0000251;Parent=HG01358_ch_T0000675;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG01358_ch_T0000675:1;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25921618	25922275	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG01358_ch_T0000675;gene_id=HG01358_ch_G0000251;Parent=HG01358_ch_T0000675;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG01358_ch_T0000675:2;Name=LOC107987240;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	25941139	25957559	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;gene_id=HG01358_ch_G0000252;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=transMap_pairwise;ID=HG01358_ch_G0000252;Name=SEPTIN14P23
HG01358_chrY	CAT	transcript	25941139	25957559	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000676;gene_id=HG01358_ch_G0000252;Parent=HG01358_ch_G0000252;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG01358_ch_T0000676;Name=SEPTIN14P23
HG01358_chrY	CAT	exon	25941139	25941717	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000676;gene_id=HG01358_ch_G0000252;Parent=HG01358_ch_T0000676;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01358_ch_T0000676:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25941718	25949755	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000676;gene_id=HG01358_ch_G0000252;Parent=HG01358_ch_T0000676;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG01358_ch_T0000676:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25949756	25949924	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000676;gene_id=HG01358_ch_G0000252;Parent=HG01358_ch_T0000676;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01358_ch_T0000676:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	25949925	25957465	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000676;gene_id=HG01358_ch_G0000252;Parent=HG01358_ch_T0000676;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG01358_ch_T0000676:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	25957466	25957559	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01358_ch_T0000676;gene_id=HG01358_ch_G0000252;Parent=HG01358_ch_T0000676;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01358_ch_T0000676:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26018154	26023018	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=hg002_chrY_paternal_550;alternative_source_transcripts=hg002_chrY_paternal_624.1;gene_id=HG01358_ch_G0000253;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG01358_ch_G0000253;Name=GOLGA2P2Y
HG01358_chrY	CAT	transcript	26018154	26023018	1000	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_G0000253;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=HG01358_ch_T0000677;Name=GOLGA2P2Y
HG01358_chrY	CAT	exon	26018154	26018196	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26018197	26018382	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01358_ch_T0000677:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26018383	26018461	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26018462	26019580	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01358_ch_T0000677:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26019581	26019932	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26019933	26020228	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01358_ch_T0000677:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26020229	26020286	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26020287	26021642	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01358_ch_T0000677:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26021643	26021717	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26021718	26022137	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01358_ch_T0000677:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26022138	26022226	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26022227	26022481	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01358_ch_T0000677:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26022482	26022670	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26022671	26022759	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01358_ch_T0000677:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26022760	26022852	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26022853	26022934	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01358_ch_T0000677:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26022935	26023018	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG01358_ch_T0000677;gene_id=HG01358_ch_G0000253;Parent=HG01358_ch_T0000677;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01358_ch_T0000677:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26025017	26026547	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_552;alternative_source_transcripts=hg002_chrY_paternal_626.1;gene_id=HG01358_ch_G0000254;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG01358_ch_G0000254;Name=LOC102724034
HG01358_chrY	CAT	transcript	26025017	26026547	1000	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG01358_ch_T0000678;gene_id=HG01358_ch_G0000254;Parent=HG01358_ch_G0000254;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=HG01358_ch_T0000678;Name=LOC102724034
HG01358_chrY	CAT	exon	26025017	26025440	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG01358_ch_T0000678;gene_id=HG01358_ch_G0000254;Parent=HG01358_ch_T0000678;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG01358_ch_T0000678:0;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26025441	26025708	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG01358_ch_T0000678;gene_id=HG01358_ch_G0000254;Parent=HG01358_ch_T0000678;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG01358_ch_T0000678:0;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26025709	26025833	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG01358_ch_T0000678;gene_id=HG01358_ch_G0000254;Parent=HG01358_ch_T0000678;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG01358_ch_T0000678:1;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26025834	26026521	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG01358_ch_T0000678;gene_id=HG01358_ch_G0000254;Parent=HG01358_ch_T0000678;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG01358_ch_T0000678:1;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26026522	26026547	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG01358_ch_T0000678;gene_id=HG01358_ch_G0000254;Parent=HG01358_ch_T0000678;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG01358_ch_T0000678:2;Name=LOC102724034;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26045755	26049552	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG01358_ch_G0000255;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG01358_ch_G0000255;Name=CSPG4P1Y
HG01358_chrY	CAT	transcript	26045755	26049552	1000	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01358_ch_T0000679;gene_id=HG01358_ch_G0000255;Parent=HG01358_ch_G0000255;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG01358_ch_T0000679;Name=CSPG4P1Y
HG01358_chrY	CAT	exon	26045755	26046477	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01358_ch_T0000679;gene_id=HG01358_ch_G0000255;Parent=HG01358_ch_T0000679;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG01358_ch_T0000679:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26046478	26049480	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01358_ch_T0000679;gene_id=HG01358_ch_G0000255;Parent=HG01358_ch_T0000679;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG01358_ch_T0000679:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26049481	26049552	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01358_ch_T0000679;gene_id=HG01358_ch_G0000255;Parent=HG01358_ch_T0000679;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG01358_ch_T0000679:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26184960	26188359	.	+	.	source_gene_common_name=CDY1B;source_gene=hg002_chrY_paternal_565;gene_id=HG01358_ch_G0000256;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=HG01358_ch_G0000256;Name=CDY1B
HG01358_chrY	CAT	transcript	26184960	26187186	100	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000680;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_G0000256;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG01358_ch_T0000680;Name=CDY1B
HG01358_chrY	CAT	exon	26184960	26187186	.	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000680;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000680;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG01358_ch_T0000680:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	26185291	26186913	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000680;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000680;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG01358_ch_T0000680:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	26185291	26185293	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000680;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000680;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG01358_ch_T0000680;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	26186911	26186913	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000680;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000680;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG01358_ch_T0000680;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	26184965	26187750	100	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG01358_ch_T0000681;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_G0000256;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG01358_ch_T0000681;Name=CDY1B
HG01358_chrY	CAT	exon	26184965	26186882	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG01358_ch_T0000681;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000681;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG01358_ch_T0000681:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	26185291	26186882	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG01358_ch_T0000681;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000681;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG01358_ch_T0000681:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	26185291	26185293	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG01358_ch_T0000681;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000681;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG01358_ch_T0000681;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26186883	26187302	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG01358_ch_T0000681;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000681;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG01358_ch_T0000681:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26187303	26187750	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG01358_ch_T0000681;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000681;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG01358_ch_T0000681:1;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	26187303	26187375	.	+	1	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG01358_ch_T0000681;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000681;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG01358_ch_T0000681:1;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	26187373	26187375	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG01358_ch_T0000681;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000681;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG01358_ch_T0000681;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	26184965	26188359	1000	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG01358_ch_T0000682;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_G0000256;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=HG01358_ch_T0000682;Name=CDY1B
HG01358_chrY	CAT	exon	26184965	26186882	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG01358_ch_T0000682;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000682;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG01358_ch_T0000682:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26186883	26187302	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG01358_ch_T0000682;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000682;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG01358_ch_T0000682:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26187303	26187502	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG01358_ch_T0000682;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000682;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG01358_ch_T0000682:1;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26187503	26188277	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG01358_ch_T0000682;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000682;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG01358_ch_T0000682:1;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26188278	26188359	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG01358_ch_T0000682;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000682;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG01358_ch_T0000682:2;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	26184973	26187750	100	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000683;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_G0000256;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG01358_ch_T0000683;Name=CDY1B
HG01358_chrY	CAT	exon	26184973	26186682	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000683;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000683;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG01358_ch_T0000683:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	26185291	26186682	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000683;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000683;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG01358_ch_T0000683:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	26185291	26185293	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000683;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000683;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG01358_ch_T0000683;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26186683	26187302	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000683;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000683;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG01358_ch_T0000683:0;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26187303	26187750	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000683;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000683;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG01358_ch_T0000683:1;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	26187303	26187323	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000683;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000683;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG01358_ch_T0000683:1;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	26187321	26187323	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG01358_ch_T0000683;gene_id=HG01358_ch_G0000256;Parent=HG01358_ch_T0000683;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG01358_ch_T0000683;Name=CDY1B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26291362	26296257	.	+	.	source_gene_common_name=TTTY3B;source_gene=hg002_chrY_paternal_645;alternative_source_transcripts=hg002_chrY_paternal_645.1;gene_id=HG01358_ch_G0000257;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG01358_ch_G0000257;Name=TTTY3B
HG01358_chrY	CAT	transcript	26291362	26296257	1000	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG01358_ch_T0000684;gene_id=HG01358_ch_G0000257;Parent=HG01358_ch_G0000257;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=HG01358_ch_T0000684;Name=TTTY3B
HG01358_chrY	CAT	exon	26291362	26291465	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG01358_ch_T0000684;gene_id=HG01358_ch_G0000257;Parent=HG01358_ch_T0000684;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG01358_ch_T0000684:0;Name=TTTY3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26291466	26293663	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG01358_ch_T0000684;gene_id=HG01358_ch_G0000257;Parent=HG01358_ch_T0000684;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG01358_ch_T0000684:0;Name=TTTY3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26293664	26293798	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG01358_ch_T0000684;gene_id=HG01358_ch_G0000257;Parent=HG01358_ch_T0000684;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG01358_ch_T0000684:1;Name=TTTY3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26293799	26296152	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG01358_ch_T0000684;gene_id=HG01358_ch_G0000257;Parent=HG01358_ch_T0000684;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG01358_ch_T0000684:1;Name=TTTY3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26296153	26296257	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG01358_ch_T0000684;gene_id=HG01358_ch_G0000257;Parent=HG01358_ch_T0000684;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG01358_ch_T0000684:2;Name=TTTY3B;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26592218	26595342	.	-	.	source_gene_common_name=LOC107987352;source_gene=hg002_chrY_paternal_665;alternative_source_transcripts=hg002_chrY_paternal_665.1;gene_id=HG01358_ch_G0000258;gene_biotype=lncRNA;gene_name=LOC107987352;gene_sources=liftoff;ID=HG01358_ch_G0000258;Name=LOC107987352
HG01358_chrY	CAT	transcript	26592218	26595342	1000	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG01358_ch_T0000685;gene_id=HG01358_ch_G0000258;Parent=HG01358_ch_G0000258;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=HG01358_ch_T0000685;Name=LOC107987352
HG01358_chrY	CAT	exon	26592218	26593546	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG01358_ch_T0000685;gene_id=HG01358_ch_G0000258;Parent=HG01358_ch_T0000685;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG01358_ch_T0000685:0;Name=LOC107987352;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26593547	26595081	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG01358_ch_T0000685;gene_id=HG01358_ch_G0000258;Parent=HG01358_ch_T0000685;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG01358_ch_T0000685:0;Name=LOC107987352;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26595082	26595142	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG01358_ch_T0000685;gene_id=HG01358_ch_G0000258;Parent=HG01358_ch_T0000685;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG01358_ch_T0000685:1;Name=LOC107987352;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26595143	26595259	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG01358_ch_T0000685;gene_id=HG01358_ch_G0000258;Parent=HG01358_ch_T0000685;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG01358_ch_T0000685:1;Name=LOC107987352;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26595260	26595342	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG01358_ch_T0000685;gene_id=HG01358_ch_G0000258;Parent=HG01358_ch_T0000685;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG01358_ch_T0000685:2;Name=LOC107987352;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26756254	26797757	.	-	.	source_gene_common_name=REREP2Y;source_gene=hg002_chrY_paternal_668;alternative_source_transcripts=hg002_chrY_paternal_668.1;gene_id=HG01358_ch_G0000259;gene_biotype=transcribed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG01358_ch_G0000259;Name=REREP2Y
HG01358_chrY	CAT	transcript	26756254	26797757	1000	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG01358_ch_T0000686;gene_id=HG01358_ch_G0000259;Parent=HG01358_ch_G0000259;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=HG01358_ch_T0000686;Name=REREP2Y
HG01358_chrY	CAT	exon	26756254	26760843	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG01358_ch_T0000686;gene_id=HG01358_ch_G0000259;Parent=HG01358_ch_T0000686;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG01358_ch_T0000686:0;Name=REREP2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26760844	26770461	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG01358_ch_T0000686;gene_id=HG01358_ch_G0000259;Parent=HG01358_ch_T0000686;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG01358_ch_T0000686:0;Name=REREP2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26770462	26770534	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG01358_ch_T0000686;gene_id=HG01358_ch_G0000259;Parent=HG01358_ch_T0000686;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG01358_ch_T0000686:1;Name=REREP2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26770535	26797354	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG01358_ch_T0000686;gene_id=HG01358_ch_G0000259;Parent=HG01358_ch_T0000686;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG01358_ch_T0000686:1;Name=REREP2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26797355	26797757	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG01358_ch_T0000686;gene_id=HG01358_ch_G0000259;Parent=HG01358_ch_T0000686;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG01358_ch_T0000686:2;Name=REREP2Y;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26809767	26809904	.	+	.	source_gene_common_name=LOC124900507;source_gene=hg002_chrY_paternal_669;alternative_source_transcripts=hg002_chrY_paternal_669.1;gene_id=HG01358_ch_G0000260;gene_biotype=snoRNA;gene_name=LOC124900507;gene_sources=liftoff;ID=HG01358_ch_G0000260;Name=LOC124900507
HG01358_chrY	CAT	transcript	26809767	26809904	1000	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG01358_ch_T0000687;gene_id=HG01358_ch_G0000260;Parent=HG01358_ch_G0000260;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=HG01358_ch_T0000687;Name=LOC124900507
HG01358_chrY	CAT	exon	26809767	26809904	.	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG01358_ch_T0000687;gene_id=HG01358_ch_G0000260;Parent=HG01358_ch_T0000687;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=exon:HG01358_ch_T0000687:0;Name=LOC124900507;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26963537	26971531	.	-	.	source_gene_common_name=LOC105377244;source_gene=hg002_chrY_paternal_673;alternative_source_transcripts=hg002_chrY_paternal_673.1;gene_id=HG01358_ch_G0000261;gene_biotype=lncRNA;gene_name=LOC105377244;gene_sources=liftoff;ID=HG01358_ch_G0000261;Name=LOC105377244
HG01358_chrY	CAT	transcript	26963537	26971531	1000	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG01358_ch_T0000688;gene_id=HG01358_ch_G0000261;Parent=HG01358_ch_G0000261;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=HG01358_ch_T0000688;Name=LOC105377244
HG01358_chrY	CAT	exon	26963537	26968139	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG01358_ch_T0000688;gene_id=HG01358_ch_G0000261;Parent=HG01358_ch_T0000688;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG01358_ch_T0000688:0;Name=LOC105377244;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26968140	26969005	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG01358_ch_T0000688;gene_id=HG01358_ch_G0000261;Parent=HG01358_ch_T0000688;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG01358_ch_T0000688:0;Name=LOC105377244;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26969006	26969172	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG01358_ch_T0000688;gene_id=HG01358_ch_G0000261;Parent=HG01358_ch_T0000688;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG01358_ch_T0000688:1;Name=LOC105377244;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26969173	26971300	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG01358_ch_T0000688;gene_id=HG01358_ch_G0000261;Parent=HG01358_ch_T0000688;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG01358_ch_T0000688:1;Name=LOC105377244;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26971301	26971531	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG01358_ch_T0000688;gene_id=HG01358_ch_G0000261;Parent=HG01358_ch_T0000688;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG01358_ch_T0000688:2;Name=LOC105377244;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	26987022	27003189	.	+	.	source_gene_common_name=LOC102723869;source_gene=hg002_chrY_paternal_675;alternative_source_transcripts=hg002_chrY_paternal_675.1;gene_id=HG01358_ch_G0000262;gene_biotype=lncRNA;gene_name=LOC102723869;gene_sources=liftoff;ID=HG01358_ch_G0000262;Name=LOC102723869
HG01358_chrY	CAT	transcript	26987022	27003189	1000	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG01358_ch_T0000689;gene_id=HG01358_ch_G0000262;Parent=HG01358_ch_G0000262;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=HG01358_ch_T0000689;Name=LOC102723869
HG01358_chrY	CAT	exon	26987022	26987289	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG01358_ch_T0000689;gene_id=HG01358_ch_G0000262;Parent=HG01358_ch_T0000689;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG01358_ch_T0000689:0;Name=LOC102723869;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26987290	26999319	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG01358_ch_T0000689;gene_id=HG01358_ch_G0000262;Parent=HG01358_ch_T0000689;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG01358_ch_T0000689:0;Name=LOC102723869;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26999320	26999348	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG01358_ch_T0000689;gene_id=HG01358_ch_G0000262;Parent=HG01358_ch_T0000689;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG01358_ch_T0000689:1;Name=LOC102723869;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26999349	26999442	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG01358_ch_T0000689;gene_id=HG01358_ch_G0000262;Parent=HG01358_ch_T0000689;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG01358_ch_T0000689:1;Name=LOC102723869;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	26999443	26999515	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG01358_ch_T0000689;gene_id=HG01358_ch_G0000262;Parent=HG01358_ch_T0000689;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG01358_ch_T0000689:2;Name=LOC102723869;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	26999516	27003158	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG01358_ch_T0000689;gene_id=HG01358_ch_G0000262;Parent=HG01358_ch_T0000689;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG01358_ch_T0000689:2;Name=LOC102723869;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	27003159	27003189	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG01358_ch_T0000689;gene_id=HG01358_ch_G0000262;Parent=HG01358_ch_T0000689;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG01358_ch_T0000689:3;Name=LOC102723869;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	52122216	52136930	.	+	.	source_gene_common_name=SPRY3;source_gene=hg002_chrY_paternal_683;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;gene_id=HG01358_ch_G0000263;gene_biotype=protein_coding;gene_name=SPRY3;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000263;Name=SPRY3
HG01358_chrY	CAT	transcript	52122216	52136930	100	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000690;gene_id=HG01358_ch_G0000263;Parent=HG01358_ch_G0000263;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=HG01358_ch_T0000690;Name=SPRY3
HG01358_chrY	CAT	exon	52122216	52122556	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000690;gene_id=HG01358_ch_G0000263;Parent=HG01358_ch_T0000690;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG01358_ch_T0000690:0;Name=SPRY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52122557	52128190	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000690;gene_id=HG01358_ch_G0000263;Parent=HG01358_ch_T0000690;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=intron:HG01358_ch_T0000690:0;Name=SPRY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52128191	52136930	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000690;gene_id=HG01358_ch_G0000263;Parent=HG01358_ch_T0000690;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG01358_ch_T0000690:1;Name=SPRY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52128297	52129163	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000690;gene_id=HG01358_ch_G0000263;Parent=HG01358_ch_T0000690;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=CDS:HG01358_ch_T0000690:0;Name=SPRY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52128297	52128299	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000690;gene_id=HG01358_ch_G0000263;Parent=HG01358_ch_T0000690;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=start_codon:HG01358_ch_T0000690;Name=SPRY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52129161	52129163	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000690;gene_id=HG01358_ch_G0000263;Parent=HG01358_ch_T0000690;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=stop_codon:HG01358_ch_T0000690;Name=SPRY3;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	52238588	52301021	.	+	.	source_gene_common_name=VAMP7;source_gene=hg002_chrY_paternal_687;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;gene_id=HG01358_ch_G0000264;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000264;Name=VAMP7
HG01358_chrY	CAT	transcript	52238588	52301021	100	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_G0000264;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01358_ch_T0000691;Name=VAMP7
HG01358_chrY	CAT	exon	52238588	52238691	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000691:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52238692	52246701	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000691:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52246702	52246791	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000691:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52246711	52246791	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000691:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52246711	52246713	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01358_ch_T0000691;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52246792	52255355	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000691:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52255356	52255493	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000691:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52255356	52255493	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000691:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52255494	52257740	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000691:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52257741	52257831	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000691:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52257741	52257831	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000691:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52257832	52277059	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000691:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52277060	52277127	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000691:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52277060	52277127	.	+	2	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000691:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52277128	52296953	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000691:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52296954	52297046	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000691:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52296954	52297046	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000691:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52297047	52299134	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000691:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52299135	52301021	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000691:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52299135	52299203	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000691:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52299201	52299203	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000691;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000691;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01358_ch_T0000691;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52238588	52301021	100	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_G0000264;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01358_ch_T0000692;Name=VAMP7
HG01358_chrY	CAT	exon	52238588	52238691	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000692:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52238692	52246701	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000692:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52246702	52246856	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000692:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52246711	52246856	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000692:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52246711	52246713	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01358_ch_T0000692;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52246857	52252866	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000692:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52252867	52252924	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000692:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52252867	52252924	.	+	1	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000692:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52252925	52255355	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000692:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52255356	52255493	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000692:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52255356	52255493	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000692:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52255494	52257740	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000692:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52257741	52257831	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000692:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52257741	52257831	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000692:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52257832	52296953	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000692:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52296954	52297046	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000692:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52296954	52297046	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000692:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52297047	52299134	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000692:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52299135	52301021	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000692:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52299135	52299391	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000692:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52299389	52299391	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000692;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000692;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01358_ch_T0000692;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52238588	52301021	100	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_G0000264;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01358_ch_T0000693;Name=VAMP7
HG01358_chrY	CAT	exon	52238588	52238691	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000693:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52238692	52246701	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000693:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52246702	52246856	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000693:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52246711	52246856	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000693:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52246711	52246713	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01358_ch_T0000693;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52246857	52252866	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000693:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52252867	52252924	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000693:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52252867	52252924	.	+	1	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000693:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52252925	52255355	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000693:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52255356	52255493	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000693:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52255356	52255493	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000693:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52255494	52257740	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000693:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52257741	52257831	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000693:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52257741	52257831	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000693:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52257832	52277059	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000693:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52277060	52277127	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000693:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52277060	52277127	.	+	2	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000693:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52277128	52296953	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000693:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52296954	52297046	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000693:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52296954	52297046	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000693:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52297047	52299134	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000693:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52299135	52301021	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000693:7;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52299135	52299203	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000693:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52299201	52299203	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000693;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000693;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01358_ch_T0000693;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52238588	52301021	100	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_G0000264;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01358_ch_T0000694;Name=VAMP7
HG01358_chrY	CAT	exon	52238588	52238691	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000694:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52238692	52246701	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000694:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52246702	52246877	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000694:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52246873	52246877	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000694:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52246873	52246875	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01358_ch_T0000694;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52246878	52252866	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000694:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52252867	52252924	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000694:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52252867	52252924	.	+	1	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000694:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52252925	52255355	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000694:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52255356	52255493	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000694:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52255356	52255493	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000694:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52255494	52257740	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000694:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52257741	52257831	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000694:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52257741	52257831	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000694:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52257832	52296953	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000694:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52296954	52297046	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000694:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52296954	52297046	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000694:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52297047	52299134	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000694:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52299135	52301021	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000694:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52299135	52299391	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000694:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52299389	52299391	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000694;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000694;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01358_ch_T0000694;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52238588	52301021	100	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_G0000264;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01358_ch_T0000695;Name=VAMP7
HG01358_chrY	CAT	exon	52238588	52238691	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000695:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52238692	52246701	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000695:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52246702	52246877	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000695:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52246873	52246877	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000695:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52246873	52246875	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01358_ch_T0000695;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52246878	52252866	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000695:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52252867	52252924	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000695:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52252867	52252924	.	+	1	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000695:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52252925	52255355	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000695:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52255356	52255493	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000695:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52255356	52255493	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000695:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52255494	52257740	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000695:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52257741	52257831	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000695:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52257741	52257831	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000695:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52257832	52277059	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000695:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52277060	52277127	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000695:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52277060	52277127	.	+	2	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000695:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52277128	52296953	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000695:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52296954	52297046	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000695:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52296954	52297046	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000695:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52297047	52299134	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01358_ch_T0000695:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52299135	52301021	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01358_ch_T0000695:7;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52299135	52299203	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01358_ch_T0000695:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52299201	52299203	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000695;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000695;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01358_ch_T0000695;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52238588	52301021	1000	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_G0000264;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG01358_ch_T0000696;Name=VAMP7
HG01358_chrY	CAT	exon	52238588	52238691	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000696:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52238692	52246701	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000696:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52246702	52246856	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000696:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52246857	52255355	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000696:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52255356	52255493	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000696:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52255494	52257740	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000696:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52257741	52257831	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000696:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52257832	52277059	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000696:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52277060	52277127	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000696:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52277128	52296953	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000696:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52296954	52297046	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000696:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52297047	52299134	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000696:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52299135	52301021	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000696;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000696;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000696:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52238588	52301021	1000	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_G0000264;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG01358_ch_T0000697;Name=VAMP7
HG01358_chrY	CAT	exon	52238588	52238691	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000697:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52238692	52246701	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000697:0;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52246702	52246791	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000697:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52246792	52252866	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000697:1;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52252867	52252924	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000697:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52252925	52255355	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000697:2;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52255356	52255493	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000697:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52255494	52257740	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000697:3;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52257741	52257831	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000697:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52257832	52277059	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000697:4;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52277060	52277127	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000697:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52277128	52296953	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000697:5;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52296954	52297046	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000697:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52297047	52299134	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01358_ch_T0000697:6;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52299135	52301021	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000697;gene_id=HG01358_ch_G0000264;Parent=HG01358_ch_T0000697;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01358_ch_T0000697:7;Name=VAMP7;rna_support=False;reference_support=False
HG01358_chrY	CAT	gene	52354807	52368071	.	+	.	source_gene_common_name=IL9R;source_gene=hg002_chrY_paternal_691;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;gene_id=HG01358_ch_G0000265;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000265;Name=IL9R
HG01358_chrY	CAT	transcript	52354807	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000698;Name=IL9R
HG01358_chrY	CAT	exon	52354807	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000698;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000698:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360164	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000698:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360165	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360165	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000698:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000698:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000698:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362539	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000698:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362540	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362540	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000698:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000698:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000698:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367106	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000698:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367104	52367106	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000698;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000698;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000698;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354864	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000699;Name=IL9R
HG01358_chrY	CAT	exon	52354864	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000699;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360140	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360141	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360141	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52365157	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52365158	52365390	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52365158	52365390	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52365391	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000699:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000699:10;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367106	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000699:10;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367104	52367106	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000699;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000699;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000699;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354864	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000700;Name=IL9R
HG01358_chrY	CAT	exon	52354864	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000700;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000700:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360140	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000700:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360141	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360141	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000700:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000700:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000700:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000700:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000700:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000700:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000700:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367106	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000700:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367104	52367106	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000700;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000700;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000700;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354864	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000701;Name=IL9R
HG01358_chrY	CAT	exon	52354864	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000701;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360140	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360141	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360141	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362539	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362540	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362540	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52365157	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52365158	52365390	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52365158	52365390	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52365391	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000701:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000701:10;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367106	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000701:10;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367104	52367106	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000701;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000701;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000701;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354864	52368603	100	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000702;Name=IL9R
HG01358_chrY	CAT	exon	52354864	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000702;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360164	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360165	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360165	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52365157	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000702:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52365158	52368603	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000702:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52365158	52365394	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000702:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52365392	52365394	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000702;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000702;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000702;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354870	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000703;Name=IL9R
HG01358_chrY	CAT	exon	52354870	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000703;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360140	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360141	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360141	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362539	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362540	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362540	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000703:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000703:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000703:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367661	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000703;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000703;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000703;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354872	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000704;Name=IL9R
HG01358_chrY	CAT	exon	52354872	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000704;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360140	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360141	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360141	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000704:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000704:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000704:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367661	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000704;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000704;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000704;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354872	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000705;Name=IL9R
HG01358_chrY	CAT	exon	52354872	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000705;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360164	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360165	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360165	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000705:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000705:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000705:9;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367661	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000705;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000705;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000705;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354874	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000706;Name=IL9R
HG01358_chrY	CAT	exon	52354874	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358584	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000706:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358585	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360128	52360278	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000706:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52360128	52360130	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000706;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000706:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000706:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000706:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000706:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000706:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000706:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000706:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000706:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000706:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000706:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000706:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000706:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000706:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000706:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000706:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367661	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000706;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000706;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000706;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354877	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000707;Name=IL9R
HG01358_chrY	CAT	exon	52354877	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000707:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52355015	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000707:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52355015	52355017	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000707;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000707:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000707:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000707:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000707:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000707:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000707:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000707:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000707:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000707:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000707:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000707:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000707:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000707:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000707:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000707:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367661	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000707;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000707;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000707;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354951	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000708;Name=IL9R
HG01358_chrY	CAT	exon	52354951	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52355015	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52355015	52355017	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000708;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52360164	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000708:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360165	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360165	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000708:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360935	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000708:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360936	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360936	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361678	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000708:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361679	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361679	52361824	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000708:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000708:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000708:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000708:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000708:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000708:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367661	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000708;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000708;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000708;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52354951	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000709;Name=IL9R
HG01358_chrY	CAT	exon	52354951	52355042	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52354999	52355042	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52354999	52355001	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000709;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52355043	52358662	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000709:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52358663	52358763	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52358663	52358763	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52358764	52360140	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000709:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360141	52360278	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360141	52360278	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360279	52360707	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000709:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360708	52360819	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360708	52360819	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52360820	52360942	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000709:3;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52360943	52361114	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52360943	52361114	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361115	52361707	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000709:4;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52361708	52361824	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52361708	52361824	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52361825	52362536	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000709:5;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52362537	52362738	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52362537	52362738	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52362739	52363341	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000709:6;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52363342	52363447	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363342	52363447	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363448	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000709:7;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000709:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367106	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000709:8;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367104	52367106	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000709;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000709;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000709;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	transcript	52363064	52368071	100	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_G0000265;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01358_ch_T0000710;Name=IL9R
HG01358_chrY	CAT	exon	52363064	52363276	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000710:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52363092	52363276	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000710:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	start_codon	52363092	52363094	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01358_ch_T0000710;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52363277	52364782	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000710:0;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52364783	52364867	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000710:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52364783	52364867	.	+	1	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000710:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	intron	52364868	52367069	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01358_ch_T0000710:1;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	exon	52367070	52368071	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01358_ch_T0000710:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	CDS	52367070	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01358_ch_T0000710:2;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY	CAT	stop_codon	52367661	52367663	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000710;gene_id=HG01358_ch_G0000265;Parent=HG01358_ch_T0000710;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01358_ch_T0000710;Name=IL9R;rna_support=False;reference_support=False
HG01358_chrY_random0000621	CAT	gene	53343	55302	.	-	.	source_gene_common_name=CDY2A;source_gene=hg002_chrY_paternal_365;alternative_source_transcripts=hg002_chrY_paternal_365.1;gene_id=HG01358_ch_G0000266;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000266;Name=CDY2A
HG01358_chrY_random0000621	CAT	transcript	53343	55302	100	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000711;gene_id=HG01358_ch_G0000266;Parent=HG01358_ch_G0000266;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=HG01358_ch_T0000711;Name=CDY2A
HG01358_chrY_random0000621	CAT	exon	53343	55302	.	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000711;gene_id=HG01358_ch_G0000266;Parent=HG01358_ch_T0000711;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=exon:HG01358_ch_T0000711:0;Name=CDY2A;rna_support=False;reference_support=False
HG01358_chrY_random0000621	CAT	CDS	53349	54974	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000711;gene_id=HG01358_ch_G0000266;Parent=HG01358_ch_T0000711;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=CDS:HG01358_ch_T0000711:0;Name=CDY2A;rna_support=False;reference_support=False
HG01358_chrY_random0000621	CAT	stop_codon	53349	53351	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000711;gene_id=HG01358_ch_G0000266;Parent=HG01358_ch_T0000711;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=stop_codon:HG01358_ch_T0000711;Name=CDY2A;rna_support=False;reference_support=False
HG01358_chrY_random0000621	CAT	start_codon	54972	54974	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000711;gene_id=HG01358_ch_G0000266;Parent=HG01358_ch_T0000711;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=start_codon:HG01358_ch_T0000711;Name=CDY2A;rna_support=False;reference_support=False
HG01358_chrY_random0000621	CAT	gene	200849	202809	.	+	.	source_gene_common_name=CDY2B;source_gene=hg002_chrY_paternal_373;alternative_source_transcripts=hg002_chrY_paternal_373.1;gene_id=HG01358_ch_G0000267;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff,augTM;ID=HG01358_ch_G0000267;Name=CDY2B
HG01358_chrY_random0000621	CAT	transcript	200849	202809	100	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000712;gene_id=HG01358_ch_G0000267;Parent=HG01358_ch_G0000267;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=HG01358_ch_T0000712;Name=CDY2B
HG01358_chrY_random0000621	CAT	exon	200849	202809	.	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000712;gene_id=HG01358_ch_G0000267;Parent=HG01358_ch_T0000712;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=exon:HG01358_ch_T0000712:0;Name=CDY2B;rna_support=False;reference_support=False
HG01358_chrY_random0000621	CAT	CDS	201177	202802	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000712;gene_id=HG01358_ch_G0000267;Parent=HG01358_ch_T0000712;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=CDS:HG01358_ch_T0000712:0;Name=CDY2B;rna_support=False;reference_support=False
HG01358_chrY_random0000621	CAT	start_codon	201177	201179	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000712;gene_id=HG01358_ch_G0000267;Parent=HG01358_ch_T0000712;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=start_codon:HG01358_ch_T0000712;Name=CDY2B;rna_support=False;reference_support=False
HG01358_chrY_random0000621	CAT	stop_codon	202800	202802	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01358_ch_T0000712;gene_id=HG01358_ch_G0000267;Parent=HG01358_ch_T0000712;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=stop_codon:HG01358_ch_T0000712;Name=CDY2B;rna_support=False;reference_support=False